BLASTX nr result
ID: Ephedra27_contig00010702
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00010702
(743 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527... 189 1e-45
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [... 188 1e-45
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin... 187 3e-45
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ... 187 4e-45
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 187 4e-45
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus... 186 5e-45
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su... 186 5e-45
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 186 7e-45
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin... 186 7e-45
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 185 1e-44
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps... 185 2e-44
gb|AFK35928.1| unknown [Lotus japonicus] 185 2e-44
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri... 185 2e-44
gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea] 184 3e-44
gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus pe... 184 3e-44
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 184 3e-44
ref|XP_004141497.1| PREDICTED: DNA-directed RNA polymerase II su... 182 8e-44
ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycin... 182 8e-44
ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata] g... 182 1e-43
ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidop... 181 2e-43
>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
max]
Length = 138
Score = 189 bits (479), Expect = 1e-45
Identities = 91/121 (75%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVALILE +YEQLQQTS+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+KS+GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 188 bits (478), Expect = 1e-45
Identities = 91/121 (75%), Positives = 106/121 (87%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVALILE +YEQLQQ SED +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR DDD IE+M+NDL +I+KF
Sbjct: 78 REILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
gi|255625623|gb|ACU13156.1| unknown [Glycine max]
Length = 138
Score = 187 bits (475), Expect = 3e-45
Identities = 90/121 (74%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQTS+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+KS+GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
II subunit RPB4 [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 187 bits (474), Expect = 4e-45
Identities = 89/121 (73%), Positives = 108/121 (89%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQ+S+DA +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 187 bits (474), Expect = 4e-45
Identities = 90/121 (74%), Positives = 106/121 (87%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVALILE +YEQLQQ S+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
Length = 138
Score = 186 bits (473), Expect = 5e-45
Identities = 89/121 (73%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQTS+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus] gi|449526195|ref|XP_004170099.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB4-like [Cucumis sativus]
Length = 138
Score = 186 bits (473), Expect = 5e-45
Identities = 91/121 (75%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQ SED ++Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R+VL RY LAEFELCVLGNLCP+T+EEA AMVPSLK+KGR DD+ IEKM+NDL +I++F
Sbjct: 78 REVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHDDEAIEKMLNDLSLIKRF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 186 bits (472), Expect = 7e-45
Identities = 88/121 (72%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVA+IL+ +YEQLQQTS+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
gi|255632071|gb|ACU16388.1| unknown [Glycine max]
Length = 138
Score = 186 bits (472), Expect = 7e-45
Identities = 89/121 (73%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQTS+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA A+VPS+KS+GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 185 bits (470), Expect = 1e-44
Identities = 89/121 (73%), Positives = 106/121 (87%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVA+ILE +YEQLQQ S+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
gi|482557570|gb|EOA21762.1| hypothetical protein
CARUB_v10002229mg [Capsella rubella]
Length = 138
Score = 185 bits (469), Expect = 2e-44
Identities = 88/121 (72%), Positives = 105/121 (86%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQ SED +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L R+ L EFELCVLGNLCP+T+EEA AMVPSLK+KGR DDD IEKM+NDL ++++F
Sbjct: 78 REILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDDAIEKMLNDLSLVKRF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 185 bits (469), Expect = 2e-44
Identities = 88/121 (72%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQ+S+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 138
Score = 185 bits (469), Expect = 2e-44
Identities = 90/121 (74%), Positives = 104/121 (85%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVALILE +YEQLQQ S D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR DD+ IEKM+ DL MI+KF
Sbjct: 78 REILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLTDLSMIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea]
Length = 138
Score = 184 bits (467), Expect = 3e-44
Identities = 88/121 (72%), Positives = 106/121 (87%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVALILE +YEQLQQT++D +Q S VFEKS QYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVALILEHKYEQLQQTADDPMNQMSQVFEKSHQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA +MVPS+K+KGR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILSRYQLAEFELCVLGNLCPETVEEAISMVPSIKAKGRALDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
Length = 138
Score = 184 bits (467), Expect = 3e-44
Identities = 89/121 (73%), Positives = 105/121 (86%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVALILE +Y+QLQQ S+D +Q S VFEKSLQYVK+FS YKNPDAVKQV
Sbjct: 18 FLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQYVKRFSRYKNPDAVKQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY L EFELCVLGNLCP+T+EEA AMVPS+K+KGR DDD I+KM+NDL +I+KF
Sbjct: 78 REILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHDDDAIDKMLNDLALIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum]
Length = 138
Score = 184 bits (466), Expect = 3e-44
Identities = 87/121 (71%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LIL+ +YEQLQQ+S+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR DD+ IEKM+NDL +I+KF
Sbjct: 78 REILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|XP_004141497.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus]
Length = 138
Score = 182 bits (463), Expect = 8e-44
Identities = 87/121 (71%), Positives = 107/121 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE +YEQLQQ +ED ++Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKYEQLQQRAEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L RY LAEFELCVLGNLCP+T+EEA ++VPSLK+KGR +D+ IEKM+NDL +I+KF
Sbjct: 78 REILSRYQLAEFELCVLGNLCPETVEEATSIVPSLKTKGRVHEDEAIEKMLNDLSLIKKF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycine max]
gi|255632992|gb|ACU16850.1| unknown [Glycine max]
Length = 195
Score = 182 bits (463), Expect = 8e-44
Identities = 88/118 (74%), Positives = 104/118 (88%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EVALILE +YEQLQQTS+D +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIR 493
R++L RY LAEFELCVLGNLCP+T+EEA AMVPS+KS+GR DD+ IEKM+NDL +I+
Sbjct: 78 REILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDLSLIK 135
>ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata]
gi|297317229|gb|EFH47651.1| RPB15.9 [Arabidopsis lyrata
subsp. lyrata]
Length = 138
Score = 182 bits (461), Expect = 1e-43
Identities = 86/121 (71%), Positives = 105/121 (86%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE ++EQLQQ SED +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKFEQLQQVSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L R+ L EFELCVLGNLCP+T+EEA AMVPSLK+KGR DD+ IEKM+NDL ++++F
Sbjct: 78 REILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEAIEKMLNDLSLVKRF 137
Query: 500 E 502
E
Sbjct: 138 E 138
>ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|75098524|sp|O48890.1|NRPB4_ARATH RecName:
Full=DNA-directed RNA polymerase II subunit 4; AltName:
Full=15.9 kDa subunit of RNA polymerase II; AltName:
Full=DNA-directed RNA polymerase II subunit D
gi|2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|9758970|dbj|BAB09413.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|21554212|gb|AAM63291.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|98960869|gb|ABF58918.1| At5g09920 [Arabidopsis
thaliana] gi|222423668|dbj|BAH19801.1| AT5G09920
[Arabidopsis thaliana] gi|332004084|gb|AED91467.1| RNA
polymerase II, Rpb4, core protein [Arabidopsis thaliana]
Length = 138
Score = 181 bits (460), Expect = 2e-43
Identities = 86/121 (71%), Positives = 105/121 (86%)
Frame = +2
Query: 140 FLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQV 319
FLKA+CLMN EV+LILE ++EQLQQ SED +Q S VFEKSLQYVK+FS YKNPDAV+QV
Sbjct: 18 FLKAKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQV 77
Query: 320 RDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRKF 499
R++L R+ L EFELCVLGNLCP+T+EEA AMVPSLK+KGR DD+ IEKM+NDL ++++F
Sbjct: 78 REILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEAIEKMLNDLSLVKRF 137
Query: 500 E 502
E
Sbjct: 138 E 138