BLASTX nr result

ID: Ephedra27_contig00010694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010694
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446616.1| hypothetical protein SORBIDRAFT_06g018970 [S...    57   3e-06
ref|XP_004141446.1| PREDICTED: casparian strip membrane protein ...    55   1e-05

>ref|XP_002446616.1| hypothetical protein SORBIDRAFT_06g018970 [Sorghum bicolor]
           gi|288558961|sp|C5Y9U6.1|CASP1_SORBI RecName:
           Full=Casparian strip membrane protein Sb06g018970
           gi|241937799|gb|EES10944.1| hypothetical protein
           SORBIDRAFT_06g018970 [Sorghum bicolor]
          Length = 192

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/54 (55%), Positives = 42/54 (77%)
 Frame = +3

Query: 159 MPLSVFHIIRPHMLVTRALVLLPLDCVVLAVLTSGASAAASMHYLANKGNSHAS 320
           +PLS+ HIIRP    +R L+L+  D V+LA+LT+GASAAA++ YLA+KGN  A+
Sbjct: 96  IPLSIVHIIRPRARYSR-LILVFFDAVMLALLTAGASAAAAIVYLAHKGNVRAN 148


>ref|XP_004141446.1| PREDICTED: casparian strip membrane protein 1-like [Cucumis
           sativus] gi|449527611|ref|XP_004170803.1| PREDICTED:
           casparian strip membrane protein 1-like [Cucumis
           sativus]
          Length = 186

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = +3

Query: 159 MPLSVFHIIRPHMLVTRALVLLPLDCVVLAVLTSGASAAASMHYLANKGN 308
           +PLS+FHI+R     TR +VL+ LD  ++A+LTSGASAAA++ YLA+KGN
Sbjct: 90  LPLSIFHILRSRARATR-VVLVFLDAGMMALLTSGASAAAAIVYLAHKGN 138


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