BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010479
         (960 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76503.1| unknown [Picea sitchensis]                              64   9e-08
ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Sela...    60   1e-06
ref|XP_003629470.1| U1 small nuclear ribonucleoprotein 70 kDa [M...    60   2e-06
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M...    60   2e-06
gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sat...    59   2e-06
ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group] g...    59   2e-06
gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japo...    59   2e-06
gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indi...    59   2e-06
gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleopro...    59   2e-06
ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [A...    59   3e-06
ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotei...    59   4e-06
ref|XP_006662143.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   5e-06
ref|XP_004509249.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   5e-06
gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus pe...    58   5e-06
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]     58   5e-06

>gb|ADE76503.1| unknown [Picea sitchensis]
          Length = 221

 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 35/61 (57%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQ--SAGRPRLE 266
           +KIDNRRVLVDVERGRTVPNW               G+ VNQ+  GREPQ  S G PR+E
Sbjct: 16  RKIDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYSGREPQLLSTGPPRIE 75

Query: 265 E 263
           E
Sbjct: 76  E 76


>ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
           gi|300151088|gb|EFJ17735.1| hypothetical protein
           SELMODRAFT_154282 [Selaginella moellendorffii]
          Length = 246

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 34/59 (57%), Positives = 36/59 (61%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEE 263
           +KIDNRRVLVDVERGRTVPNW               GD VNQ+  GREPQ  G  R EE
Sbjct: 72  RKIDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGDEVNQKYSGREPQ-VGGARTEE 129


>ref|XP_003629470.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
           gi|355523492|gb|AET03946.1| U1 small nuclear
           ribonucleoprotein 70 kDa [Medicago truncatula]
          Length = 314

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 35/59 (59%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEE 263
           +KI+ RRVLVDVERGRTVPNW               GD VNQR  GRE Q +G  R EE
Sbjct: 11  RKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQQSGPSRSEE 69


>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
           gi|355523491|gb|AET03945.1| U1 small nuclear
           ribonucleoprotein 70 kDa [Medicago truncatula]
          Length = 502

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 35/59 (59%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEE 263
           +KI+ RRVLVDVERGRTVPNW               GD VNQR  GRE Q +G  R EE
Sbjct: 199 RKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQQSGPSRSEE 257


>gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
           Group]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/81 (45%), Positives = 43/81 (53%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEEL 260
           +K+DNRRVLVDVERGRTVPNW               G++  Q+   R+ Q AGRPR EE 
Sbjct: 203 RKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPRSEE- 261

Query: 259 SSXXXXXXXXXXREHSIERPR 197
                       RE S ERPR
Sbjct: 262 -PMRDERRADRDREKSRERPR 281


>ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
           gi|78707654|gb|ABB46629.1| transposon protein, putative,
           CACTA, En/Spm sub-class, expressed [Oryza sativa
           Japonica Group] gi|113638659|dbj|BAF25964.1|
           Os10g0115600 [Oryza sativa Japonica Group]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/81 (45%), Positives = 43/81 (53%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEEL 260
           +K+DNRRVLVDVERGRTVPNW               G++  Q+   R+ Q AGRPR EE 
Sbjct: 203 RKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPRSEE- 261

Query: 259 SSXXXXXXXXXXREHSIERPR 197
                       RE S ERPR
Sbjct: 262 -PRRDERRADRDREKSRERPR 281


>gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
          Length = 476

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/81 (45%), Positives = 43/81 (53%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEEL 260
           +K+DNRRVLVDVERGRTVPNW               G++  Q+   R+ Q AGRPR EE 
Sbjct: 216 RKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPRSEE- 274

Query: 259 SSXXXXXXXXXXREHSIERPR 197
                       RE S ERPR
Sbjct: 275 -PRRDERRADRDREKSRERPR 294


>gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
          Length = 485

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/81 (45%), Positives = 43/81 (53%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEEL 260
           +K+DNRRVLVDVERGRTVPNW               G++  Q+   R+ Q AGRPR EE 
Sbjct: 216 RKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPRSEE- 274

Query: 259 SSXXXXXXXXXXREHSIERPR 197
                       RE S ERPR
Sbjct: 275 -PRRDERRADRDREKSRERPR 294


>gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica
           Group]
          Length = 491

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/81 (45%), Positives = 43/81 (53%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEEL 260
           +K+DNRRVLVDVERGRTVPNW               G++  Q+   R+ Q AGRPR EE 
Sbjct: 231 RKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHAGRPRSEE- 289

Query: 259 SSXXXXXXXXXXREHSIERPR 197
                       RE S ERPR
Sbjct: 290 -PRRDERRADRDREKSRERPR 309


>ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [Amborella trichopoda]
           gi|548859890|gb|ERN17498.1| hypothetical protein
           AMTR_s00059p00067090 [Amborella trichopoda]
          Length = 458

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 33/60 (55%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSA-GRPRLEE 263
           +K+DNRRVLVDVERGRTVPNW               G+ VNQ+  GREPQ A G  R EE
Sbjct: 202 RKLDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYSGREPQQATGGSRSEE 261


>ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
           [Brachypodium distachyon]
          Length = 475

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 30/59 (50%), Positives = 36/59 (61%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEE 263
           +K+DN+RVLVDVERGRTVPNW               G + +Q+   RE  SAGRPR EE
Sbjct: 203 RKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRISGQNADQKPSAREQPSAGRPRSEE 261


>ref|XP_006662143.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Oryza
           brachyantha]
          Length = 464

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 37/81 (45%), Positives = 41/81 (50%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEEL 260
           +K+DNRRVLVDVERGRTVPNW               G +  Q+   RE   AGRPR EE 
Sbjct: 195 RKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGQNAEQKLSAREQPHAGRPRSEE- 253

Query: 259 SSXXXXXXXXXXREHSIERPR 197
                       RE S ERPR
Sbjct: 254 -PRRDDRHADRDREKSRERPR 273


>ref|XP_004509249.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cicer
           arietinum]
          Length = 510

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 31/59 (52%), Positives = 35/59 (59%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEE 263
           +KI+ RRVLVDVERGRTVPNW               G+ VNQR  GRE Q +G  R EE
Sbjct: 205 RKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSGPSRSEE 263


>gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus persica]
          Length = 517

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 33/60 (55%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREP-QSAGRPRLEE 263
           +KI+ RRVLVDVERGRTVPNW               G+ VNQR  GRE  QS G+PR EE
Sbjct: 208 RKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQVQSGGQPRSEE 267


>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
          Length = 506

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 31/59 (52%), Positives = 35/59 (59%)
 Frame = -3

Query: 439 QKIDNRRVLVDVERGRTVPNWXXXXXXXXXXXXXXXGDSVNQRRLGREPQSAGRPRLEE 263
           +KI+ RRVLVDVERGRTVPNW               G+ VNQR  GRE Q +G  R EE
Sbjct: 203 RKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSGPSRSEE 261