BLASTX nr result

ID: Ephedra27_contig00010335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010335
         (971 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838902.1| hypothetical protein AMTR_s00002p00269120 [A...    66   2e-08
ref|XP_002593725.1| hypothetical protein BRAFLDRAFT_142173 [Bran...    62   3e-07

>ref|XP_006838902.1| hypothetical protein AMTR_s00002p00269120 [Amborella trichopoda]
           gi|548841408|gb|ERN01471.1| hypothetical protein
           AMTR_s00002p00269120 [Amborella trichopoda]
          Length = 434

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = -2

Query: 700 PEKEVTSIAVKGSGWGARFTSEFELKFRGGN-SVLNQPFRDGGGGKSTTAVTESLGHRNT 524
           P+  + +I    +GWG+ F+ +FE +  G   S      RD GG      V+ S G    
Sbjct: 338 PDSVMVAIKPGSTGWGSGFSGDFEFELVGSQKSEGKNDERDSGG----VPVSGSSGKEEE 393

Query: 523 GDQITVVVSEWQPPAVRPKTVQRGRKIGAGLASMLRE 413
           G QI VVV+EWQPPA++PK   RG+ +  GLAS+LR+
Sbjct: 394 G-QIKVVVTEWQPPALKPKASLRGKNLVTGLASVLRD 429


>ref|XP_002593725.1| hypothetical protein BRAFLDRAFT_142173 [Branchiostoma floridae]
           gi|229278953|gb|EEN49736.1| hypothetical protein
           BRAFLDRAFT_142173 [Branchiostoma floridae]
          Length = 113

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = -1

Query: 857 QECCSSKGCCFREECCSGK*CHFGEECCFRKRCRCGEDCCARNGS*FGEESCARK 693
           Q CC+ + CC R+ CC+G+ C  G+ CC R+ C  G++CC R      +  CAR+
Sbjct: 10  QNCCTRQNCCSRQNCCTGQNCCTGQNCCTRQTCCTGQNCCTRQNCCTRQNCCARQ 64


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