BLASTX nr result

ID: Ephedra27_contig00010127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010127
         (1300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40776.1| unknown [Picea sitchensis]                              75   5e-11
gb|ABR17563.1| unknown [Picea sitchensis]                              74   1e-10

>gb|ACN40776.1| unknown [Picea sitchensis]
          Length = 484

 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 41/106 (38%), Positives = 62/106 (58%)
 Frame = -1

Query: 643 SQRSGIQSRCCESVGTFDSLDNLSSDSTANNMMPKATPNSAATKLRKYVHFSRKTQRRSI 464
           SQ SGIQ  CC +V   D  D    D + +NM    + N++A+K+ +     RK ++  +
Sbjct: 374 SQESGIQLECCNTVKDSDYRDEQFCDYSTDNMTGNGSSNNSASKVGQ-PSSRRKLRKEKV 432

Query: 463 NNAMKMLRGIVPGVENMDNADILDMAVHHLKFLQMKIRRLEHDLND 326
             A+ +LR IVP   +MD A +L++A  HLK LQ+K+ RLE + ND
Sbjct: 433 KKAINLLRSIVPEGHSMDTAAVLEVASQHLKSLQLKLERLEANQND 478



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%)
 Frame = -2

Query: 1299 QAKVPEGIEVQYSEACPTRFVIFDQTGSSARMIMHPRLICDYPSWFPKS 1153
            Q ++ +G+EVQYSEA   RF+IFDQTGS  R+I+HP L+ ++P+  P S
Sbjct: 139  QVQLLDGLEVQYSEAFSKRFIIFDQTGSGVRVIVHPSLVYEFPNLLPDS 187


>gb|ABR17563.1| unknown [Picea sitchensis]
          Length = 484

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 40/106 (37%), Positives = 61/106 (57%)
 Frame = -1

Query: 643 SQRSGIQSRCCESVGTFDSLDNLSSDSTANNMMPKATPNSAATKLRKYVHFSRKTQRRSI 464
           SQ SGIQ  CC +V   D  D    D + +NM    + N++ +K+ +     RK ++  +
Sbjct: 374 SQESGIQLECCNTVKDSDYRDEQFCDYSTDNMTGNGSSNNSGSKVGQ-PSSRRKLRKEKV 432

Query: 463 NNAMKMLRGIVPGVENMDNADILDMAVHHLKFLQMKIRRLEHDLND 326
             A+ +LR IVP   +MD A +L++A  HLK LQ+K+ RLE + ND
Sbjct: 433 KKAINLLRSIVPEGHSMDTAAVLEVASQHLKSLQLKLERLEANQND 478



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%)
 Frame = -2

Query: 1299 QAKVPEGIEVQYSEACPTRFVIFDQTGSSARMIMHPRLICDYPSWFPKS 1153
            Q ++ +G+EVQYSEA   RF+IFDQTGS  R+I+HP L+ ++P+  P S
Sbjct: 139  QVQLLDGLEVQYSEAFSKRFIIFDQTGSGVRVIVHPSLVYEFPNLLPDS 187


Top