BLASTX nr result

ID: Ephedra27_contig00010014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010014
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [A...    80   4e-13
ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Sela...    79   5e-13
gb|EMS64156.1| U1 small nuclear ribonucleoprotein 70 kDa [Tritic...    79   6e-13
dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]     79   6e-13
ref|XP_004983436.1| PREDICTED: U1 small nuclear ribonucleoprotei...    78   1e-12
ref|XP_006662143.1| PREDICTED: U1 small nuclear ribonucleoprotei...    77   2e-12
gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sat...    77   2e-12
ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group] g...    77   2e-12
ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotei...    77   2e-12
gb|AFW68959.1| U1 snRNP [Zea mays]                                     77   3e-12
ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [S...    77   3e-12
gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japo...    77   3e-12
gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indi...    77   3e-12
gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleopro...    77   3e-12
ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [S...    76   4e-12
ref|XP_006573582.1| PREDICTED: U1 small nuclear ribonucleoprotei...    76   5e-12
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei...    76   5e-12
ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citr...    75   1e-11
ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citr...    75   1e-11
ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotei...    75   1e-11

>ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [Amborella trichopoda]
           gi|548859890|gb|ERN17498.1| hypothetical protein
           AMTR_s00059p00067090 [Amborella trichopoda]
          Length = 458

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 33/41 (80%), Positives = 40/41 (97%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRL+H+K TNKPRGYAF+E++HTRDMKTAYKQADGRK+DN
Sbjct: 166 RVRLIHDKTTNKPRGYAFIEYVHTRDMKTAYKQADGRKLDN 206


>ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
           gi|300151088|gb|EFJ17735.1| hypothetical protein
           SELMODRAFT_154282 [Selaginella moellendorffii]
          Length = 246

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLVH+KD+NKPRGYAF+E+ HTRDMK AYKQADGRKIDN
Sbjct: 36  QVRLVHDKDSNKPRGYAFIEYFHTRDMKAAYKQADGRKIDN 76


>gb|EMS64156.1| U1 small nuclear ribonucleoprotein 70 kDa [Triticum urartu]
          Length = 454

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV +KDTNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 145 RVRLVTDKDTNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 185


>dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 473

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV +KDTNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 167 RVRLVTDKDTNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 207


>ref|XP_004983436.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Setaria
           italica]
          Length = 491

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV EKDT+KPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 166 RVRLVTEKDTSKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 206


>ref|XP_006662143.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Oryza
           brachyantha]
          Length = 464

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 159 RVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 199


>gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
           Group]
          Length = 463

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 167 RVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 207


>ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
           gi|78707654|gb|ABB46629.1| transposon protein, putative,
           CACTA, En/Spm sub-class, expressed [Oryza sativa
           Japonica Group] gi|113638659|dbj|BAF25964.1|
           Os10g0115600 [Oryza sativa Japonica Group]
          Length = 463

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 167 RVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 207


>ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
           [Brachypodium distachyon]
          Length = 475

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 167 RVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 207


>gb|AFW68959.1| U1 snRNP [Zea mays]
          Length = 491

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV EKDT+KPRGYAF+E++HTRDMK AYKQADGRK+DN
Sbjct: 166 RVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQADGRKVDN 206


>ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
           gi|241921952|gb|EER95096.1| hypothetical protein
           SORBIDRAFT_01g039540 [Sorghum bicolor]
          Length = 484

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV EKDT+KPRGYAF+E++HTRDMK AYKQADGRK+DN
Sbjct: 166 RVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQADGRKVDN 206


>gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
          Length = 476

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 292 VRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 181 VRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 220


>gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
          Length = 485

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 292 VRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 181 VRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 220


>gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica
           Group]
          Length = 491

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 292 VRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+DN
Sbjct: 196 VRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDN 235


>ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
           gi|241918656|gb|EER91800.1| hypothetical protein
           SORBIDRAFT_01g026920 [Sorghum bicolor]
          Length = 486

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = +1

Query: 292 VRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           VRLV EKDT+KPRGYAF+E++HTRDMK+AYKQADGRK+DN
Sbjct: 167 VRLVTEKDTSKPRGYAFIEYVHTRDMKSAYKQADGRKVDN 206


>ref|XP_006573582.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X2 [Glycine max]
          Length = 479

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKID 408
           +VRLV +KDTNKPRGYAF+E++HTRDMK AYKQADGRKID
Sbjct: 169 RVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKID 208


>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X1 [Glycine max]
          Length = 481

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKID 408
           +VRLV +KDTNKPRGYAF+E++HTRDMK AYKQADGRKID
Sbjct: 169 RVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKID 208


>ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
           gi|568824794|ref|XP_006466779.1| PREDICTED: U1 small
           nuclear ribonucleoprotein 70 kDa-like [Citrus sinensis]
           gi|557527686|gb|ESR38936.1| hypothetical protein
           CICLE_v10025502mg [Citrus clementina]
          Length = 480

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKID 408
           +VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+D
Sbjct: 166 RVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLD 205


>ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
           gi|557527685|gb|ESR38935.1| hypothetical protein
           CICLE_v10025502mg [Citrus clementina]
          Length = 478

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKID 408
           +VRLV +K+TNKPRGYAF+E+MHTRDMK AYKQADGRK+D
Sbjct: 166 RVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLD 205


>ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
           [Brachypodium distachyon]
          Length = 478

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 289 KVRLVHEKDTNKPRGYAFVEFMHTRDMKTAYKQADGRKIDN 411
           +VRLV +K TNKPRGYAFVE++HTRDMK+AYKQADGRK+DN
Sbjct: 166 RVRLVTDKVTNKPRGYAFVEYVHTRDMKSAYKQADGRKVDN 206


Top