BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00009976
         (677 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006606411.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    63   9e-08
ref|XP_003593067.1| FBD-associated F-box protein [Medicago trunc...    63   9e-08
ref|XP_004307830.1| PREDICTED: putative FBD-associated F-box pro...    60   6e-07
ref|XP_006286758.1| hypothetical protein CARUB_v10003199mg [Caps...    59   1e-06
gb|AFK38351.1| unknown [Medicago truncatula]                           59   2e-06
ref|XP_003597759.1| F-box/LRR-repeat protein [Medicago truncatul...    59   2e-06
ref|XP_003597758.1| F-box/LRR-repeat protein [Medicago truncatul...    59   2e-06
gb|EOY20085.1| F-box/RNI-like superfamily protein [Theobroma cacao]    58   3e-06
ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...    57   4e-06
gb|EOY20086.1| F-box/RNI-like superfamily protein [Theobroma cacao]    57   5e-06
ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    56   9e-06

>ref|XP_006606411.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g16930-like [Glycine
           max]
          Length = 269

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
 Frame = +1

Query: 178 DDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYFSVRDFLNGQGIIN 357
           +DR S LPD+IL+ I+      K AV+  +LS+RW++L+K+LP L     DF   + +  
Sbjct: 13  EDRLSGLPDEILLIIMSFI-MIKDAVQTCILSKRWRNLWKFLPNLTLHSNDFKKNR-VFY 70

Query: 358 EETVAIQDCAAAVTRHQAEVHTLF-VEYIRYLSKWEWCVKHFTTSHLQHLTLHS-----T 519
           E    I  C+        + HTL  +++ R L    +C     T+ + +   H+      
Sbjct: 71  EFVSRIVSCS-------DQNHTLHSLDFYRPL----YCKPKIMTNLINYAICHNIQQLKL 119

Query: 520 NYPNALCTPLCIFSCASLVTLS 585
           N PN    P C+FSC SL +LS
Sbjct: 120 NVPNNFSLPACVFSCPSLTSLS 141


>ref|XP_003593067.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355482115|gb|AES63318.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 466

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
 Frame = +1

Query: 181 DRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYF------SVRDFLNG 342
           D+ SSLPD+IL RIL    S K AV  SVLS+RW +L+ YLP + F      +V   L  
Sbjct: 16  DKISSLPDEILFRILSFV-STKEAVATSVLSKRWTNLWHYLPNIDFTDIRVNTVESNLRF 74

Query: 343 QGIINEETVAIQDCAAA-------VTRHQAEVHTLFVEYIRYLSKWEWCVKHFTTSHLQH 501
              +    V+ +D + +       +    ++ H  + +    L+KW   V      +L H
Sbjct: 75  NEFVYSVLVS-RDASGSRFIDSFHLNIQYSDSHLAYNKEFPNLTKWVNSVVQRGLKYL-H 132

Query: 502 LTL------HSTNYPNALCTPLCIFSCASLVTLSTDSF--DTISLRDNFQGFPNLRQFSL 657
           L L      H + YP     P+ IF+C +LV+L+   F  D  S       FP+L+  SL
Sbjct: 133 LRLRVPLPDHFSGYPYFPKLPISIFTCKTLVSLNLSWFRVDGFSFTSVGFEFPSLKTLSL 192

Query: 658 RLAVF 672
           RL  F
Sbjct: 193 RLIKF 197


>ref|XP_004307830.1| PREDICTED: putative FBD-associated F-box protein At5g56440-like
           [Fragaria vesca subsp. vesca]
          Length = 456

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
 Frame = +1

Query: 136 MSQNMSKFQRNLHGDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLY 315
           M   + K +  L G+DR S LPDD+L RIL L ++   AV+ ++LS+RWKDL+K +   +
Sbjct: 1   MGSKLPKLEERL-GEDRISQLPDDVLARILSLLDNTVLAVQTTILSKRWKDLWKSIS--F 57

Query: 316 FSVRDFLNGQGIINEETVAIQDCAAAVTRH-QAEVHTLFVEYIR-----------YLSKW 459
             + D      ++++  + + D  + VT H   ++    + Y             Y+   
Sbjct: 58  IRLGDV--SIDVVDDRFMTLVD--SVVTYHGSTDILKFHLSYNNDGTRDDMLADDYICIR 113

Query: 460 EW---CVKHFTTS-HLQHLTLHSTNYPNALCTPLCIFSCASLVTLSTDSFDTISLRDNFQ 627
            W    V+H     HL    L           P C+F C +LV L  DS          +
Sbjct: 114 RWICTVVQHNVAELHLNLFNLEGNEQEFPFLIPECLFMCTTLVALKVDSNSICFSNCPIE 173

Query: 628 G-FPNLR 645
           G FP L+
Sbjct: 174 GCFPRLK 180


>ref|XP_006286758.1| hypothetical protein CARUB_v10003199mg [Capsella rubella]
           gi|482555464|gb|EOA19656.1| hypothetical protein
           CARUB_v10003199mg [Capsella rubella]
          Length = 463

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
 Frame = +1

Query: 175 GDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYFSVRDFLNGQGII 354
           G+DR S  PD +L  IL    + K AV+  VLS+RWK L+  +P L   V +F  G    
Sbjct: 15  GEDRISFFPDHLLCEILSHLPT-KVAVRTCVLSKRWKSLWLSVPLLDLGVEEFRAGYSEF 73

Query: 355 NEETVAIQDCAAAVTRHQAEVHTLFVEYIR------YLSKWEWCVKHFTTSHLQHLTLH- 513
                +  D +      +  +H L +   R      YL++W   + +     +QHL ++ 
Sbjct: 74  ARVLHSFLDIS-----RETRIHKLILYLTRNQRDQSYLTQW---IHNAVMLKVQHLDINI 125

Query: 514 -STNYPNALCTPLCIFSCASLVTL-----STDSFDTISL 612
            S +Y      PLC+++C +L++L     +   F+ +SL
Sbjct: 126 CSASYVGTKLMPLCLYTCETLLSLKLYHVALPDFENVSL 164


>gb|AFK38351.1| unknown [Medicago truncatula]
          Length = 430

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
 Frame = +1

Query: 151 SKFQRNLHGDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYFSVRD 330
           S+  ++   +D  S+L D ILI +L    + + A  C +LS+RW  L+K LP +  S  +
Sbjct: 69  SRKHKHNENEDIISNLTDCILIHVLSFLNAKEAAQTC-ILSKRWITLWKGLPTITLSSSN 127

Query: 331 FLNGQGIINEETVAIQDCAAAVTRHQAEVHTLFVEYIRYL--SKWEWCVKHFTTSHLQHL 504
           F   + +    +  +     + T H  +VH L+     YL  S ++  +K+  + ++QHL
Sbjct: 128 FRTEKSLAEFLSHFLSLRDGSTTIHTLDVHCLY-----YLEPSLFQMIIKYAISHNVQHL 182

Query: 505 TLHSTNYPNAL-CTPLCIFSCASLVTLSTDSFDTI 606
            +   N+P  +   P C FSC +L +L+   +D +
Sbjct: 183 LM---NFPCRIDLFPSCFFSCHTLTSLNLSGYDIL 214


>ref|XP_003597759.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355486807|gb|AES68010.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 466

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
 Frame = +1

Query: 151 SKFQRNLHGDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYFSVRD 330
           S+  ++   +D  S+L D ILI +L    + + A  C +LS+RW  L+K LP +  S  +
Sbjct: 69  SRKHKHNENEDIISNLTDCILIHVLSFLNAKEAAQTC-ILSKRWITLWKGLPTITLSSSN 127

Query: 331 FLNGQGIINEETVAIQDCAAAVTRHQAEVHTLFVEYIRYL--SKWEWCVKHFTTSHLQHL 504
           F   + +    +  +     + T H  +VH L+     YL  S ++  +K+  + ++QHL
Sbjct: 128 FRTEKSLAEFLSHFLSLRDGSTTIHTLDVHCLY-----YLEPSLFQMIIKYAISHNVQHL 182

Query: 505 TLHSTNYPNAL-CTPLCIFSCASLVTLSTDSFDTI 606
            +   N+P  +   P C FSC +L +L+   +D +
Sbjct: 183 LM---NFPCRIDLFPSCFFSCHTLTSLNLSGYDIL 214


>ref|XP_003597758.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355486806|gb|AES68009.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
 Frame = +1

Query: 151 SKFQRNLHGDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYFSVRD 330
           S+  ++   +D  S+L D ILI +L    + + A  C +LS+RW  L+K LP +  S  +
Sbjct: 70  SRKHKHNENEDIISNLTDCILIHVLSFLNAKEAAQTC-ILSKRWITLWKGLPTITLSSSN 128

Query: 331 FLNGQGIINEETVAIQDCAAAVTRHQAEVHTLFVEYIRYL--SKWEWCVKHFTTSHLQHL 504
           F   + +    +  +     + T H  +VH L+     YL  S ++  +K+  + ++QHL
Sbjct: 129 FRTEKSLAEFLSHFLSLRDGSTTIHTLDVHCLY-----YLEPSLFQMIIKYAISHNVQHL 183

Query: 505 TLHSTNYPNAL-CTPLCIFSCASLVTLSTDSFDTI 606
            +   N+P  +   P C FSC +L +L+   +D +
Sbjct: 184 LM---NFPCRIDLFPSCFFSCHTLTSLNLSGYDIL 215


>gb|EOY20085.1| F-box/RNI-like superfamily protein [Theobroma cacao]
          Length = 383

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
 Frame = +1

Query: 115 LTDFGGVMSQNMSKFQRNLHGDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLY 294
           + DF  V+   + +  RN+  +DR S LPDD+L++I+ L  + K AV+  VLS+RWK L+
Sbjct: 1   MEDFSDVLLLTLGR--RNMTVEDRISKLPDDLLLKIMSLLNT-KQAVQTCVLSKRWKPLW 57

Query: 295 KYLPCLYFSVRDFLNGQGIINE--ETVAIQDCA-------------------AAVTRHQA 411
           + LP L F    F   Q I +E  E V ++ C+                     V  H  
Sbjct: 58  QSLPNLDFDFDTFPFQQEIDDEDKEEVEMKMCSFSNFISQVLLRRCPTDLVKVCVQSHIY 117

Query: 412 EVHTLFVEYIRYLSKWEWCVKHFTTSHLQHLTLHSTNYPNALCTPLCIFSCASLVTLSTD 591
           + H   V+ +       + VKH    ++Q LT HS +    L  P   ++C SL +L   
Sbjct: 118 DPHCFLVDGLLC-----YAVKH----NVQQLTFHSRSDCQYL-FPESFWTCQSLTSLELK 167

Query: 592 SFDTISLR 615
             D + ++
Sbjct: 168 GSDWMPMK 175


>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 47/164 (28%), Positives = 71/164 (43%)
 Frame = +1

Query: 181 DRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYFSVRDFLNGQGIINE 360
           DR S LPD +++ IL    + + A  C +LS+RWK+L+K++  L  S R F         
Sbjct: 12  DRLSDLPDSVVLHILSFFNTKEAAQTC-ILSKRWKNLWKFVTTLKLSTRHFETIHPFTKF 70

Query: 361 ETVAIQDCAAAVTRHQAEVHTLFVEYIRYLSKWEWCVKHFTTSHLQHLTLHSTNYPNALC 540
            +  +     +      + H   +     L K    VK+  +  +Q L +      +  C
Sbjct: 71  VSHVLSHRDDSTALQALDSHRASIVEAYLLKK---IVKYAVSHSVQQLQISVD--ADFQC 125

Query: 541 TPLCIFSCASLVTLSTDSFDTISLRDNFQGFPNLRQFSLRLAVF 672
            P C FSC +L +L   S    +L  NF   P L   SLR  VF
Sbjct: 126 FPPCFFSCNTLTSLKL-SLGFNTLFPNFLNLPALTSLSLRSFVF 168


>gb|EOY20086.1| F-box/RNI-like superfamily protein [Theobroma cacao]
          Length = 847

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 48/167 (28%), Positives = 83/167 (49%)
 Frame = +1

Query: 115 LTDFGGVMSQNMSKFQRNLHGDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLY 294
           + DF  ++   + +  R++  +DR S LPDD+L++I+ L  + K AV+  VLS+RWK L+
Sbjct: 46  MEDFSDMLLLTLGR--RSMTVEDRISKLPDDLLLKIMSLLNT-KQAVQTCVLSKRWKPLW 102

Query: 295 KYLPCLYFSVRDFLNGQGIINEETVAIQDCAAAVTRHQAEVHTLFVEYIRYLSKWEWCVK 474
           + LP L F+   F   Q   +E+   +      V  H  + H   V+ +       + VK
Sbjct: 103 QSLPNLDFNFDTFPFQQETDDEDKEEV-----CVQSHIYDPHCFLVDGLLC-----YAVK 152

Query: 475 HFTTSHLQHLTLHSTNYPNALCTPLCIFSCASLVTLSTDSFDTISLR 615
           H    ++Q LT HS +    L  P   ++C SL ++     D + ++
Sbjct: 153 H----NVQQLTFHSRSDCQYL-FPESFWTCQSLTSIELKGSDWMPMK 194


>ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262763|sp|Q9FNJ4.1|FDL32_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At5g22670
           gi|10178241|dbj|BAB11673.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005679|gb|AED93062.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 443

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
 Frame = +1

Query: 160 QRNLHGDDRPSSLPDDILIRILCLTESYKCAVKCSVLSRRWKDLYKYLPCLYFSVRDFLN 339
           +R +   D  S LPDD+L RIL    + K AV+ SVLS+RWK     +P L F+V +F +
Sbjct: 4   KRGVTSQDSISLLPDDLLCRILSNLPT-KVAVRTSVLSKRWKRFSLSVPLLEFNVSEF-H 61

Query: 340 GQGIINEETVAIQDCAAAVTRHQAEVHTLFVEYIR-YLSKWEWCVKHFTTSHLQHLTLHS 516
           G            D +     H+ ++     ++ R YL++W   + +     +QHL +  
Sbjct: 62  GYYEFARVVHGFLDTSRETCIHKLKLAFEKKQHDRSYLTQW---IHNAVKRKVQHLDIGR 118

Query: 517 TNYPNALCTPLCIFSCASLVTL-----STDSFDTISL 612
            +Y      P  +++C +LV+L     S   FD +SL
Sbjct: 119 WSYLGQELIPHSLYTCETLVSLRLHNVSLPDFDHVSL 155