BLASTX nr result

ID: Ephedra27_contig00009899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00009899
         (765 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001778961.1| predicted protein [Physcomitrella patens] gi...    59   1e-06

>ref|XP_001778961.1| predicted protein [Physcomitrella patens]
           gi|162669633|gb|EDQ56216.1| predicted protein
           [Physcomitrella patens]
          Length = 364

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 52/145 (35%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
 Frame = +1

Query: 223 LKDENLNLGKTPILEELNSRGCKRVTCLPLPCANSSSLETLDFSH-SGIVQLPEDLIYLR 399
           L +E  NL     LEELN R C  +  LP   AN SSL TLD S  S +V LP +L  L 
Sbjct: 97  LSNELANLSS---LEELNLRNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLS 153

Query: 400 VFK---AEGCHLQCSFSIRASNL*H---VNVARCDVLQRFPFVSKVYNVLQKLDVSHCLQ 561
             K     GC    S S + +NL     ++++ C  L   P V    + L++L++S+C  
Sbjct: 154 SLKRLSLRGCSSLTSSSNKLANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNLSNCSS 213

Query: 562 LRTL-EEILIMPFLQFLYVVECLEL 633
           L  L  E+  +  L  LY+  CL L
Sbjct: 214 LARLPNELTNLSSLTVLYLSGCLSL 238


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