BLASTX nr result

ID: Ephedra27_contig00009872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00009872
         (1615 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002989006.1| hypothetical protein SELMODRAFT_128938 [Sela...    60   4e-06

>ref|XP_002989006.1| hypothetical protein SELMODRAFT_128938 [Selaginella moellendorffii]
            gi|300143343|gb|EFJ10035.1| hypothetical protein
            SELMODRAFT_128938 [Selaginella moellendorffii]
          Length = 527

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 14/234 (5%)
 Frame = -1

Query: 1168 LFTTWLTSPHSLNEDALRNISTELLQSYLKDNEEDMPG---QSVSNIVGNLDSRLVQCFL 998
            L  +WL    S++E  LR I   L   Y   ++  +     + +++++  L S L   F 
Sbjct: 41   LLASWLECRTSVDEADLRKIWKGLFYCYWHADKAIVQADLAERLASLIQRLPSELALQFF 100

Query: 997  MSFLMATRKS-GGMNIYKLGKVCSIFGVRYFWSMSCAVERNGWNPEFVGKIMNAMTER-- 827
              +L   R+  GG++  ++ K   +   ++  SM  A+ +  W+ E V + M+A+  R  
Sbjct: 101  EGYLGTMRREWGGIDHLRMDKFY-LLQRKFVSSMFMALRQQRWDKEIVQRYMDALKNRAF 159

Query: 826  --NILFPQKHPAILLFDVYQHQIHGCSPAQ---IKMLIKPFYAILASRSNQICQRIARYS 662
              N LFP +  ++ L D++  Q+ G  P +   + +L++PFYA LA   ++   +  +  
Sbjct: 160  LSNDLFPAQGCSMHLADIFLEQLDGVLPEEKEVLGILLEPFYATLALGPDKNVLKRVKEG 219

Query: 661  RLHNLLESKFPMLKGAD---EFCGSGCLDFPRKFMECAAMFSHLYEDKEVPYDL 509
                LLE+    +K  +   EF  S  L   ++  E AA    L  +++V Y L
Sbjct: 220  VFDRLLEAARESVKSENKLAEFVTS--LPMEKRLFELAASADTLQGNRKVLYAL 271


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