BLASTX nr result
ID: Ephedra27_contig00009863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00009863
(448 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17974.1| unknown [Picea sitchensis] 84 2e-14
ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [A... 74 2e-11
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 72 6e-11
ref|XP_002525676.1| transcription initiation factor brf1, putati... 72 1e-10
gb|EMT11226.1| Transcription factor IIIB 70 kDa subunit [Aegilop... 69 6e-10
gb|EMS55840.1| Transcription factor IIIB 90 kDa subunit [Triticu... 69 6e-10
gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative is... 68 1e-09
gb|EEC78942.1| hypothetical protein OsI_19387 [Oryza sativa Indi... 67 3e-09
ref|NP_001055147.1| Os05g0305100 [Oryza sativa Japonica Group] g... 67 3e-09
ref|XP_004966246.1| PREDICTED: transcription factor IIIB 90 kDa ... 66 4e-09
ref|XP_004966245.1| PREDICTED: transcription factor IIIB 90 kDa ... 66 4e-09
ref|XP_004966244.1| PREDICTED: transcription factor IIIB 90 kDa ... 66 4e-09
ref|XP_004966243.1| PREDICTED: transcription factor IIIB 90 kDa ... 66 4e-09
gb|AFW80947.1| hypothetical protein ZEAMMB73_313717 [Zea mays] 66 4e-09
gb|AFW80945.1| hypothetical protein ZEAMMB73_313717 [Zea mays] g... 66 4e-09
ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [S... 65 7e-09
gb|EMS68929.1| Transcription factor IIIB 90 kDa subunit [Triticu... 65 1e-08
gb|EMT14705.1| Transcription factor IIIB 90 kDa subunit [Aegilop... 64 2e-08
gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays] 64 2e-08
ref|NP_001141990.1| hypothetical protein [Zea mays] gi|194706710... 64 2e-08
>gb|ABR17974.1| unknown [Picea sitchensis]
Length = 746
Score = 84.0 bits (206), Expect = 2e-14
Identities = 48/120 (40%), Positives = 61/120 (50%)
Frame = +1
Query: 88 KGDGENEEHDETLSDIDDNEVDGYLHNEEEIKLKTIIWTEMNKDYXXXXXXXXXXXXXXX 267
K + E +E ETLSDIDD EV+ YLHN+EE++LKT+IWTEMNK+Y
Sbjct: 498 KVEDEMDEEIETLSDIDDEEVERYLHNKEEVRLKTLIWTEMNKEYLEEQAAKEEAIAAAE 557
Query: 268 XXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXERTYKRAEETAKKVPAESAAEATRQIL 447
++ KRAEE+ KVPA+SAAEATRQ+L
Sbjct: 558 AAHAAALAAAAEGAPDAVELAAAAAAAVAKLKKDKQRKRAEESKNKVPAQSAAEATRQML 617
>ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [Amborella trichopoda]
gi|548830636|gb|ERM93559.1| hypothetical protein
AMTR_s00004p00092300 [Amborella trichopoda]
Length = 737
Score = 74.3 bits (181), Expect = 2e-11
Identities = 44/115 (38%), Positives = 56/115 (48%)
Frame = +1
Query: 103 NEEHDETLSDIDDNEVDGYLHNEEEIKLKTIIWTEMNKDYXXXXXXXXXXXXXXXXXXXX 282
+++ ETLSDIDD EV+GY+HNEEE +LKTIIWTEMNK+Y
Sbjct: 478 SDDESETLSDIDDLEVNGYIHNEEETRLKTIIWTEMNKEY---LEEQAAKEAAAAAARAA 534
Query: 283 XXXXXXXXXXXXXXXRXXXXXXXXXXXXERTYKRAEETAKKVPAESAAEATRQIL 447
++ KRAEE PA++AAEATRQ+L
Sbjct: 535 YEADIANCHGDALELAKATAAAIAKMKKDKQQKRAEEARNATPAQTAAEATRQML 589
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 72.4 bits (176), Expect = 6e-11
Identities = 53/141 (37%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Frame = +1
Query: 49 GSSDKE-DIDE---MNMKG-DGENE---EHDETLSDIDDNEVDGYLHNEEEIKLKTIIWT 204
G+SDK+ IDE ++ G D EN + E+LSDIDD EVDGYLHNE+E + K IIW
Sbjct: 388 GASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWE 447
Query: 205 EMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXERTYKR 384
MNK+Y ER KR
Sbjct: 448 AMNKEYLEEQAAKEAAAAAAKEAYEASFKDNPEGLKAAQELAAATAAAVAKSRKERQQKR 507
Query: 385 AEETAKKVPAESAAEATRQIL 447
A E VPA++AAEATRQ+L
Sbjct: 508 AAEAKNTVPAQTAAEATRQML 528
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 71.6 bits (174), Expect = 1e-10
Identities = 49/140 (35%), Positives = 61/140 (43%)
Frame = +1
Query: 28 LSSDVGNGSSDKEDIDEMNMKGDGENEEHDETLSDIDDNEVDGYLHNEEEIKLKTIIWTE 207
L +D G G S D D+M+ K E++ SDIDD EVDGYLHNEEE + K IIW E
Sbjct: 393 LPADDG-GYSKLHDDDDMSSKALDESDN----FSDIDDAEVDGYLHNEEEAQFKKIIWEE 447
Query: 208 MNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXERTYKRA 387
MN++Y E+ KRA
Sbjct: 448 MNREYLEEQAAKEAVAAAAKEAWEAKFKDCPEEMQAARELEAAVAAALAKSKKEKQQKRA 507
Query: 388 EETAKKVPAESAAEATRQIL 447
E VPA+SA+EA RQ+L
Sbjct: 508 AEAKNSVPAQSASEAARQML 527
>gb|EMT11226.1| Transcription factor IIIB 70 kDa subunit [Aegilops tauschii]
Length = 583
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = +1
Query: 16 SKGILSSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKL 186
S G S+ +G+G K+ + + + GEN + D E+ SDIDD EVDGYLHNEEE +
Sbjct: 380 SVGDKSAAIGSGEIGKDYVTSKDPEVGGENGKADADPESFSDIDDVEVDGYLHNEEETQY 439
Query: 187 KTIIWTEMNKDY 222
K IIW EMNK+Y
Sbjct: 440 KKIIWEEMNKEY 451
>gb|EMS55840.1| Transcription factor IIIB 90 kDa subunit [Triticum urartu]
Length = 402
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = +1
Query: 16 SKGILSSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKL 186
S G S+ +G+G K+ + + + GEN + D E+ SDIDD EVDGYLHNEEE +
Sbjct: 199 SVGDKSATIGSGEIGKDYVASKDPEVGGENGKADADPESFSDIDDLEVDGYLHNEEETQY 258
Query: 187 KTIIWTEMNKDY 222
K IIW EMNK+Y
Sbjct: 259 KKIIWEEMNKEY 270
>gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 1 [Theobroma
cacao]
Length = 605
Score = 67.8 bits (164), Expect = 1e-09
Identities = 49/143 (34%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Frame = +1
Query: 31 SSDVGNGSSDKEDIDEMN---MKG-DGENEEHDETLSDIDDNEVDGYLHNEEEIKLKTII 198
S V G++ K DE + + G DG +E D SDIDD EVDGYLHNEEE + K II
Sbjct: 372 SIGVSEGTTKKAAFDEGDNDKLPGVDGSGDESDN-FSDIDDLEVDGYLHNEEEKRFKKII 430
Query: 199 WTEMNKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXERTY 378
W EMN++Y ER
Sbjct: 431 WEEMNREYLEEQAAKEAAAAAAKEANMANYDKCPEDLQAAQELAAAAAAVVAKSRKERQQ 490
Query: 379 KRAEETAKKVPAESAAEATRQIL 447
KRA E P ++AAEATR++L
Sbjct: 491 KRAAEAKNSGPPQTAAEATRRML 513
>gb|EEC78942.1| hypothetical protein OsI_19387 [Oryza sativa Indica Group]
Length = 521
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
Frame = +1
Query: 88 KGDGENEEHDE---TLSDIDDNEVDGYLHNEEEIKLKTIIWTEMNKDY 222
+G+G+N++ DE +LSDIDD EVDGYLHNEEE + K IIW EMNK+Y
Sbjct: 348 EGEGKNDKADEGPESLSDIDDAEVDGYLHNEEETQYKKIIWEEMNKEY 395
>ref|NP_001055147.1| Os05g0305100 [Oryza sativa Japonica Group]
gi|113578698|dbj|BAF17061.1| Os05g0305100 [Oryza sativa
Japonica Group] gi|222631042|gb|EEE63174.1| hypothetical
protein OsJ_17983 [Oryza sativa Japonica Group]
Length = 574
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
Frame = +1
Query: 88 KGDGENEEHDE---TLSDIDDNEVDGYLHNEEEIKLKTIIWTEMNKDY 222
+G+G+N++ DE +LSDIDD EVDGYLHNEEE + K IIW EMNK+Y
Sbjct: 401 EGEGKNDKADEGPESLSDIDDAEVDGYLHNEEETQYKKIIWEEMNKEY 448
>ref|XP_004966246.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X4
[Setaria italica]
Length = 539
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 SSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKLKTIIW 201
SS V +G + + +G GEN E D E+LSDIDD EVD YLHNEEE + K IIW
Sbjct: 349 SSTVASGELTNDSEVSKDPEGGGENCEGDADPESLSDIDDVEVDWYLHNEEETQYKKIIW 408
Query: 202 TEMNKDY 222
EMNK+Y
Sbjct: 409 EEMNKEY 415
>ref|XP_004966245.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X3
[Setaria italica]
Length = 576
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 SSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKLKTIIW 201
SS V +G + + +G GEN E D E+LSDIDD EVD YLHNEEE + K IIW
Sbjct: 386 SSTVASGELTNDSEVSKDPEGGGENCEGDADPESLSDIDDVEVDWYLHNEEETQYKKIIW 445
Query: 202 TEMNKDY 222
EMNK+Y
Sbjct: 446 EEMNKEY 452
>ref|XP_004966244.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Setaria italica]
Length = 574
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 SSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKLKTIIW 201
SS V +G + + +G GEN E D E+LSDIDD EVD YLHNEEE + K IIW
Sbjct: 384 SSTVASGELTNDSEVSKDPEGGGENCEGDADPESLSDIDDVEVDWYLHNEEETQYKKIIW 443
Query: 202 TEMNKDY 222
EMNK+Y
Sbjct: 444 EEMNKEY 450
>ref|XP_004966243.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X1
[Setaria italica]
Length = 600
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 SSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKLKTIIW 201
SS V +G + + +G GEN E D E+LSDIDD EVD YLHNEEE + K IIW
Sbjct: 410 SSTVASGELTNDSEVSKDPEGGGENCEGDADPESLSDIDDVEVDWYLHNEEETQYKKIIW 469
Query: 202 TEMNKDY 222
EMNK+Y
Sbjct: 470 EEMNKEY 476
>gb|AFW80947.1| hypothetical protein ZEAMMB73_313717 [Zea mays]
Length = 374
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +1
Query: 13 ASKGILSSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIK 183
A G SS +G+G + + + + GEN E + E+LSDIDD EVD YLHNEEE +
Sbjct: 175 ALSGDKSSTIGSGGLINDSVPPKDPEEGGENCEGNADPESLSDIDDVEVDWYLHNEEETQ 234
Query: 184 LKTIIWTEMNKDY 222
K IIW EMNK+Y
Sbjct: 235 YKKIIWEEMNKEY 247
>gb|AFW80945.1| hypothetical protein ZEAMMB73_313717 [Zea mays]
gi|413948297|gb|AFW80946.1| hypothetical protein
ZEAMMB73_313717 [Zea mays]
Length = 588
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +1
Query: 13 ASKGILSSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIK 183
A G SS +G+G + + + + GEN E + E+LSDIDD EVD YLHNEEE +
Sbjct: 389 ALSGDKSSTIGSGGLINDSVPPKDPEEGGENCEGNADPESLSDIDDVEVDWYLHNEEETQ 448
Query: 184 LKTIIWTEMNKDY 222
K IIW EMNK+Y
Sbjct: 449 YKKIIWEEMNKEY 461
>ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [Sorghum bicolor]
gi|241945449|gb|EES18594.1| hypothetical protein
SORBIDRAFT_09g027090 [Sorghum bicolor]
Length = 579
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +1
Query: 22 GILSSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKLKT 192
G SS VG+G + + + + GEN E + E+LSDIDD EVD YLHNEEE + K
Sbjct: 384 GHKSSTVGSGELINDSVPPKDPEEGGENCEGNADSESLSDIDDAEVDWYLHNEEEKQYKK 443
Query: 193 IIWTEMNKDY 222
IIW EMNK+Y
Sbjct: 444 IIWEEMNKEY 453
>gb|EMS68929.1| Transcription factor IIIB 90 kDa subunit [Triticum urartu]
Length = 514
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = +1
Query: 34 SDVGNGSSDKEDIDE-MNMKGDGENEEHDE---TLSDIDDNEVDGYLHNEEEIKLKTIIW 201
S G+ S D + +N + +GEN + D LSDIDD EVDGYLHNEEE + K IIW
Sbjct: 314 SSTGSSSQTANDFEAPINPEVEGENGKADSDPGNLSDIDDVEVDGYLHNEEETQNKKIIW 373
Query: 202 TEMNKDY 222
EMNK+Y
Sbjct: 374 EEMNKEY 380
>gb|EMT14705.1| Transcription factor IIIB 90 kDa subunit [Aegilops tauschii]
Length = 343
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 16 SKGILSSDVGNG--SSDKEDIDEMNMKGDGENEEHDETLSDIDDNEVDGYLHNEEEIKLK 189
S I SS N + D +++ N K D ++E LSDIDD EVDGYLHNEEE + K
Sbjct: 143 SSTISSSQTANDFVAPDDAEVEGENGKADSDSEN----LSDIDDVEVDGYLHNEEETQNK 198
Query: 190 TIIWTEMNKDY 222
IIW EMNK+Y
Sbjct: 199 KIIWEEMNKEY 209
>gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays]
Length = 515
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +1
Query: 22 GILSSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKLKT 192
G SS +G+ + + + + GEN E + E+LSDIDD EVDGYLHNEEE + K
Sbjct: 318 GDKSSKMGSEGLINDSMPPKDPEEGGENCEGNADPESLSDIDDAEVDGYLHNEEETQYKK 377
Query: 193 IIWTEMNKDY 222
IIW EMNK+Y
Sbjct: 378 IIWEEMNKEY 387
>ref|NP_001141990.1| hypothetical protein [Zea mays] gi|194706710|gb|ACF87439.1| unknown
[Zea mays] gi|413946300|gb|AFW78949.1| hypothetical
protein ZEAMMB73_136276 [Zea mays]
Length = 580
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +1
Query: 22 GILSSDVGNGSSDKEDIDEMNMKGDGENEEHD---ETLSDIDDNEVDGYLHNEEEIKLKT 192
G SS +G+ + + + + GEN E + E+LSDIDD EVDGYLHNEEE + K
Sbjct: 383 GDKSSKMGSEGLINDSMPPKDPEEGGENCEGNADPESLSDIDDAEVDGYLHNEEETQYKK 442
Query: 193 IIWTEMNKDY 222
IIW EMNK+Y
Sbjct: 443 IIWEEMNKEY 452