BLASTX nr result

ID: Ephedra27_contig00009676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00009676
         (1929 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002135479.1| GA28568 [Drosophila pseudoobscura pseudoobsc...    61   2e-06

>ref|XP_002135479.1| GA28568 [Drosophila pseudoobscura pseudoobscura]
            gi|198151215|gb|EDY74106.1| GA28568 [Drosophila
            pseudoobscura pseudoobscura]
          Length = 1997

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 51/201 (25%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
 Frame = -2

Query: 839  PSTSVISQASRMMPQVSGHGALSSASPRPM----PAIGKGPETFGQAPTPKGSEQLGNDQ 672
            PS++  S  S   P  S     SS  P P     P+     E     P+P+ S +  N  
Sbjct: 1148 PSSTEPSPESSTEPNSSSSEEPSSTEPSPESSTEPSNSSSEEPSSTEPSPESSTEPSNSS 1207

Query: 671  QKVKDPRTQDANAVSGQSKVAAVGSVKGESSNIEGEENATQEPKKDSSFEPSFTENSKRM 492
             +        +   S +S      S   E S+ E    ++ EP   SS EPS TE S   
Sbjct: 1208 SEEPSSTEPSSTEPSPESSTEPNSSSSEEPSSTEPSPESSTEPNSSSSEEPSSTEPS--- 1264

Query: 491  EQFSSKASESKNQDGESQQLISHNKELEDAT-------QKPIEEDKEANSSIEPKKENNR 333
             + S++ S S +++  S +  S     E +T       ++P   +    SS EP   ++ 
Sbjct: 1265 PESSTEPSSSSSEEPSSTEPSSTEPSPESSTEPNNSSSEEPSSTEPSPESSTEPNSSSSE 1324

Query: 332  LDGSLQPKPHQAPESNPSQNA 270
               S +P P  + E N S +A
Sbjct: 1325 EPSSTEPSPESSTEPNSSSSA 1345



 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 55/242 (22%), Positives = 91/242 (37%), Gaps = 11/242 (4%)
 Frame = -2

Query: 839  PSTSVISQASRMMPQVSGHGALSSASPRPM----PAIGKGPETFGQAPTPKGSEQLGNDQ 672
            PS++  S  S   P  S     SS  P P     P+     E     P+P+ S +  N  
Sbjct: 934  PSSTEPSPESSTEPNSSSSEEPSSTEPSPESSTEPSNSSSEEPSSTEPSPESSTEPSNSS 993

Query: 671  QKVKDPRTQDANAVSGQSKVAAVGSVKGESSNIEGEENATQEPKKDSSFEPSFTENSKRM 492
             +        +   S +S      S   E S+ E    ++ EP   SS EPS TE S   
Sbjct: 994  SEEPSSTEPSSTEPSPESSTEPNSSSSEEPSSTEPSPESSTEPSNSSSEEPSSTEPS--- 1050

Query: 491  EQFSSKASESKNQDGESQQLISHNKELEDAT-------QKPIEEDKEANSSIEPKKENNR 333
             + S++ S S +++  S +  S     E +T       ++P   +    SS EP   ++ 
Sbjct: 1051 PESSTEPSNSSSEEPSSTEPSSTEPSPESSTEPNSSSSEEPSSTEPSPESSTEPSNSSSE 1110

Query: 332  LDGSLQPKPHQAPESNPSQNAFNQFKESGQRGEEKVGRSTVDGLRKDNVSQHLQRPDHSS 153
               S +P P  + E + S +     +E    G      S+ +    +   +    P+ SS
Sbjct: 1111 EPSSTEPSPESSTEPSNSSS-----EEPSSTGPSSTAPSSTEPSSTEPSPESSTEPNSSS 1165

Query: 152  QQ 147
             +
Sbjct: 1166 SE 1167


Top