BLASTX nr result
ID: Ephedra27_contig00009662
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00009662
(1789 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 57 6e-08
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 57 6e-08
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 57 6e-08
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 57 6e-08
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa] 59 1e-07
emb|CAN79644.1| hypothetical protein VITISV_033788 [Vitis vinifera] 59 1e-07
emb|CAN72767.1| hypothetical protein VITISV_020055 [Vitis vinifera] 54 1e-07
gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subc... 64 2e-07
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera] 59 2e-07
emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera] 58 2e-07
emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera] 58 2e-07
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 58 2e-07
gb|AAX96493.1| retrotransposon protein, putative, unclassified [... 64 3e-07
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana] 59 4e-07
emb|CAN80083.1| hypothetical protein VITISV_011293 [Vitis vinifera] 55 4e-07
emb|CAN70147.1| hypothetical protein VITISV_006221 [Vitis vinifera] 62 4e-07
emb|CAD40731.2| OSJNBa0072D21.17 [Oryza sativa Japonica Group] g... 63 5e-07
emb|CAN69158.1| hypothetical protein VITISV_041593 [Vitis vinifera] 63 5e-07
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 54 5e-07
gb|ABB47233.1| retrotransposon protein, putative, Ty1-copia subc... 62 6e-07
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 57.0 bits (136), Expect(2) = 6e-08
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
I VK GI++ Q YA E++++F++++ + I++ + E +D +SL
Sbjct: 1070 IEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1129
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSL YLT TR I + V+SRY+ P +H
Sbjct: 1130 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 76 EVAIHILQYIKGTLNYDMYYS 14
+ A IL+YIKGT+N+ ++YS
Sbjct: 1163 KAAKRILRYIKGTVNFGLHYS 1183
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 57.0 bits (136), Expect(2) = 6e-08
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
I VK GI++ Q YA E++++F++++ + I++ + E +D +SL
Sbjct: 1070 IEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1129
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSL YLT TR I + V+SRY+ P +H
Sbjct: 1130 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 76 EVAIHILQYIKGTLNYDMYYS 14
+ A IL+YIKGT+N+ ++YS
Sbjct: 1163 KAAKRILRYIKGTVNFGLHYS 1183
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 57.0 bits (136), Expect(2) = 6e-08
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
I VK GI++ Q YA E++++F++++ + I++ + E +D +SL
Sbjct: 1070 IEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1129
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSL YLT TR I + V+SRY+ P +H
Sbjct: 1130 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 76 EVAIHILQYIKGTLNYDMYYS 14
+ A IL+YIKGT+N+ ++YS
Sbjct: 1163 KAAKRILRYIKGTVNFGLHYS 1183
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 57.0 bits (136), Expect(2) = 6e-08
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
I VK GI++ Q YA E++++F++++ + I++ + E +D +SL
Sbjct: 1038 IEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1097
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSL YLT TR I + V+SRY+ P +H
Sbjct: 1098 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1129
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 76 EVAIHILQYIKGTLNYDMYYS 14
+ A IL+YIKGT+N+ ++YS
Sbjct: 1131 KAAKRILRYIKGTVNFGLHYS 1151
>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
Length = 2037
Score = 58.9 bits (141), Expect(2) = 1e-07
Identities = 31/94 (32%), Positives = 55/94 (58%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
+ + GI++ Q YA ++++RF+LE+ ++ L QN +I E+ + A RSL
Sbjct: 1508 MEIHQCSSGIFISQRKYAVDILKRFKLESCKEVTTLMAQNEKISKNDGEKLEEPSAYRSL 1567
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISHNG 75
+GSL+YLT T+ + + ++SR++S P H G
Sbjct: 1568 VGSLLYLTATKPDLMFLAGLLSRFMSSPSNFHMG 1601
Score = 25.4 bits (54), Expect(2) = 1e-07
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 79 MEVAIHILQYIKGTLNYDMYYS 14
M VA +L+YI+GT N + YS
Sbjct: 1600 MGVAKRVLKYIRGTTNLGILYS 1621
>emb|CAN79644.1| hypothetical protein VITISV_033788 [Vitis vinifera]
Length = 1181
Score = 58.5 bits (140), Expect(2) = 1e-07
Identities = 33/86 (38%), Positives = 53/86 (61%)
Frame = -3
Query: 332 GIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSLIGSLVYLT 153
GI++ Q YA +++++F+LE+ ++ QN +I E+ + A RSL+GSL+YL
Sbjct: 909 GIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSLVGSLLYLX 968
Query: 152 VTRLHI*PVISVISRYLSKPRISHNG 75
VTR + S++SR+LS PR H G
Sbjct: 969 VTRPDLMFPASLLSRFLSSPRNVHMG 994
Score = 25.8 bits (55), Expect(2) = 1e-07
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 79 MEVAIHILQYIKGTLNYDMYY 17
M VA +L+Y+KGT N ++Y
Sbjct: 993 MGVAKRVLKYVKGTTNLGIWY 1013
>emb|CAN72767.1| hypothetical protein VITISV_020055 [Vitis vinifera]
Length = 351
Score = 54.3 bits (129), Expect(2) = 1e-07
Identities = 33/92 (35%), Positives = 48/92 (52%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
I V GIY+ Q YA E++RRF + + +I + +DE +
Sbjct: 104 IEVLQKSDGIYICQRKYALEVLRRFGMMESNLVGSPIVLGFKISRDKNGDFVDETYHKQP 163
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSL+YLT TRL+I V +ISRY++KP H
Sbjct: 164 VGSLMYLTATRLNIMFVTCLISRYMAKPMEIH 195
Score = 30.0 bits (66), Expect(2) = 1e-07
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 79 MEVAIHILQYIKGTLNYDMYY 17
++ A LQY+KGT+NY +YY
Sbjct: 196 LQAAKRALQYLKGTVNYGIYY 216
>gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1508
Score = 64.3 bits (155), Expect = 2e-07
Identities = 34/92 (36%), Positives = 55/92 (59%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
+ +K T QG ++ Q Y +L+RRF++EN IS + + + +D+K RS+
Sbjct: 1231 LQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDSEAVDQKEYRSM 1290
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
IGSL+YLTV+R I V+ + +R+ + PR SH
Sbjct: 1291 IGSLLYLTVSRPDIQFVVCLCARFQASPRASH 1322
>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
Length = 1945
Score = 59.3 bits (142), Expect(2) = 2e-07
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = -3
Query: 332 GIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSLIGSLVYLT 153
GI++ Q YA +++++F+LE+ ++ QN +I E+ + A RSL+GSL+YLT
Sbjct: 1124 GIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSLVGSLLYLT 1183
Query: 152 VTRLHI*PVISVISRYLSKPRISHNGSS 69
VTR + S++SR+LS P H G S
Sbjct: 1184 VTRPDLMFPTSLLSRFLSSPSNVHMGVS 1211
Score = 24.6 bits (52), Expect(2) = 2e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 79 MEVAIHILQYIKGTLNYDMYY 17
M V+ +L+Y+KGT N ++Y
Sbjct: 1208 MGVSKRVLKYVKGTTNLGIWY 1228
>emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera]
Length = 1798
Score = 58.2 bits (139), Expect(2) = 2e-07
Identities = 32/86 (37%), Positives = 53/86 (61%)
Frame = -3
Query: 332 GIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSLIGSLVYLT 153
GI++ Q YA +++++F+LE+ ++ QN +I E+ + A RSL+ SL+YLT
Sbjct: 1161 GIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSLVSSLLYLT 1220
Query: 152 VTRLHI*PVISVISRYLSKPRISHNG 75
+TR + S++SR+LS PR H G
Sbjct: 1221 ITRPDLMFPASLLSRFLSSPRNVHMG 1246
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 79 MEVAIHILQYIKGTLNYDMYY 17
M VA +L+Y+KGT N ++Y
Sbjct: 1245 MGVAKRVLKYVKGTTNLGIWY 1265
>emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera]
Length = 1919
Score = 57.8 bits (138), Expect(2) = 2e-07
Identities = 32/85 (37%), Positives = 53/85 (62%)
Frame = -3
Query: 329 IYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSLIGSLVYLTV 150
I++ Q YA +++++F+LE+ ++ QN +I E+ + A RSL+GSL+YLTV
Sbjct: 1396 IFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSLVGSLLYLTV 1455
Query: 149 TRLHI*PVISVISRYLSKPRISHNG 75
TR + S++SR++S PR H G
Sbjct: 1456 TRPDLMFPASLLSRFMSSPRNVHMG 1480
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 79 MEVAIHILQYIKGTLNYDMYY 17
M VA +L+Y+KGT N ++Y
Sbjct: 1479 MGVAKRVLKYVKGTTNLGIWY 1499
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 57.8 bits (138), Expect(2) = 2e-07
Identities = 31/92 (33%), Positives = 54/92 (58%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
I V + I + Q YA +L+++F++EN + N+++ + +D RSL
Sbjct: 1007 IEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSL 1066
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSL+YLT TR I V+S++SR+++ P+ SH
Sbjct: 1067 VGSLMYLTATRPDILFVVSMLSRFMTNPKRSH 1098
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 76 EVAIHILQYIKGTLNYDMYY 17
E +L+YI GT+N+ +YY
Sbjct: 1100 EAGKRVLRYILGTINFGIYY 1119
>gb|AAX96493.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77548895|gb|ABA91692.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1299
Score = 63.5 bits (153), Expect = 3e-07
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
+ +K T QG ++ Q Y +L+RRF++EN IS + + + +D+K RS+
Sbjct: 1108 LQIKQTSQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAVDQKEYRSM 1167
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISHNGS----SHSHSPVYQRNTEL*YVL 18
IGSL+YLT +R I V+ + +R+ + PR SH + S V Q E YV+
Sbjct: 1168 IGSLLYLTASRPDIQFVVCLCARFQASPRASHRQAVKRIMRKQSSVAQSTAESEYVV 1224
>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
Length = 1643
Score = 58.9 bits (141), Expect(2) = 4e-07
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQL-ENKPSISILSTQNIRIFCEMEER*IDEKACRS 180
+ + T +GI + Q+ YA L++RF + +KP+ + +ST ++F + + +DEK R
Sbjct: 1369 LQINQTDEGITISQSTYAQNLVKRFGMCSSKPAPTPMSTTT-KLFKDEKGVKVDEKLYRG 1427
Query: 179 LIGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+IGSL+YLT TR + + + +RY S P+ SH
Sbjct: 1428 MIGSLLYLTATRPDLCLSVGLCARYQSNPKASH 1460
Score = 23.9 bits (50), Expect(2) = 4e-07
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -1
Query: 61 ILQYIKGTLNYDMYYS 14
I++Y+ GT+NY + Y+
Sbjct: 1467 IIKYVSGTINYGLNYT 1482
>emb|CAN80083.1| hypothetical protein VITISV_011293 [Vitis vinifera]
Length = 777
Score = 54.7 bits (130), Expect(2) = 4e-07
Identities = 31/92 (33%), Positives = 51/92 (55%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
+ + ++ G+Y+ QA YAS L+ + L + ++ N+ + + + R L
Sbjct: 473 LEITHSTBGLYITQAKYASNLLSQAGLTDSKTVDTPVELNVHLTPSGGKPLSNPSLYRRL 532
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSLVYLTVTR I V+ +S+YLS PR +H
Sbjct: 533 VGSLVYLTVTRPDISYVVHQVSQYLSAPRSTH 564
Score = 28.1 bits (61), Expect(2) = 4e-07
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = -1
Query: 67 IHILQYIKGTLNYDMYYS 14
+HIL+Y+KGTL + ++YS
Sbjct: 569 LHILRYLKGTLFHGIFYS 586
>emb|CAN70147.1| hypothetical protein VITISV_006221 [Vitis vinifera]
Length = 304
Score = 62.4 bits (150), Expect(2) = 4e-07
Identities = 34/90 (37%), Positives = 54/90 (60%)
Frame = -3
Query: 350 VKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSLIG 171
VK K GI+L Q+ YA EL+++F LE+ N+++ + + ++E RS+IG
Sbjct: 52 VKQLKDGIFLSQSKYARELVKKFGLESTKHFRTPMPTNLKLSKDESGKGVEETLYRSMIG 111
Query: 170 SLVYLTVTRLHI*PVISVISRYLSKPRISH 81
SL+YLT +RL I + V +RY + P+ SH
Sbjct: 112 SLLYLTASRLDIAFSVGVCARYQAFPKESH 141
Score = 20.4 bits (41), Expect(2) = 4e-07
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 61 ILQYIKGTLNYDMYY 17
I++YI GTL ++Y
Sbjct: 148 IIRYIAGTLELGLWY 162
>emb|CAD40731.2| OSJNBa0072D21.17 [Oryza sativa Japonica Group]
gi|38347465|emb|CAE05285.2| OSJNBa0084N21.3 [Oryza sativa
Japonica Group]
Length = 1452
Score = 62.8 bits (151), Expect = 5e-07
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
+ +K T QG ++ Q Y +L++RF++EN IS + + + +D+K RS+
Sbjct: 1230 LQIKQTPQGTFVHQTKYTKDLLKRFKMENYKPISTPIGSTAVLDPDEDGEAVDQKEYRSM 1289
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISHNGS----SHSHSPVYQRNTEL*YV 21
IGSL+YLT +R +I V+ + +R+ + PR SH + S V Q E YV
Sbjct: 1290 IGSLLYLTASRPNIQFVVCLCARFQASPRASHRQAVKRIMRKQSSVAQSTAESEYV 1345
>emb|CAN69158.1| hypothetical protein VITISV_041593 [Vitis vinifera]
Length = 775
Score = 62.8 bits (151), Expect = 5e-07
Identities = 33/90 (36%), Positives = 53/90 (58%)
Frame = -3
Query: 350 VKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSLIG 171
VK K I+L Q+ Y EL+++F LE+ N+++ + + ++E CRS+IG
Sbjct: 561 VKQLKDEIFLSQSKYTRELVKKFGLESIKHFRTPMPTNLKLSMDESRKMVEETLCRSMIG 620
Query: 170 SLVYLTVTRLHI*PVISVISRYLSKPRISH 81
SL+YLT TR +I + V +RY + P+ SH
Sbjct: 621 SLLYLTTTRSNIAFSVGVCARYQACPKESH 650
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 53.9 bits (128), Expect(2) = 5e-07
Identities = 29/92 (31%), Positives = 50/92 (54%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
I VK I++ Q YA E++++F++++ + I++ + E +D +SL
Sbjct: 1009 IEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1068
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
+GSL YLT TR I + V+SRY+ P +H
Sbjct: 1069 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1100
Score = 28.5 bits (62), Expect(2) = 5e-07
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 76 EVAIHILQYIKGTLNYDMYYS 14
+ A IL+YIKGT+N+ ++YS
Sbjct: 1102 KAAKRILRYIKGTVNFGLHYS 1122
>gb|ABB47233.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 271
Score = 62.4 bits (150), Expect = 6e-07
Identities = 33/92 (35%), Positives = 54/92 (58%)
Frame = -3
Query: 356 ISVKYTKQGIYL*QAMYASELIRRFQLENKPSISILSTQNIRIFCEMEER*IDEKACRSL 177
+ +K T QG ++ Q Y +L+RRF++EN IS + + + +D+K RS+
Sbjct: 99 LQIKQTSQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAVDQKEYRSM 158
Query: 176 IGSLVYLTVTRLHI*PVISVISRYLSKPRISH 81
IGSL+YLT +R I V+ + +R+ + PR SH
Sbjct: 159 IGSLLYLTASRPDIQFVVCLCARFQASPRASH 190