BLASTX nr result

ID: Ephedra27_contig00009580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00009580
         (678 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24442.1| unknown [Picea sitchensis]                              63   9e-08
ref|NP_001142574.1| uncharacterized protein LOC100274835 [Zea ma...    57   7e-06

>gb|ABK24442.1| unknown [Picea sitchensis]
          Length = 326

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +3

Query: 390 TFASQHLFSALGGTVAYGDVAASVDEADFNPNIYSPLRVPAFE-ATTLKTYHAETKPILS 566
           +FASQ L S   G++AY D A  +D+  ++ +  +  R P ++ A+++KTY+ E KP+ S
Sbjct: 51  SFASQFLLSG-AGSIAYCDAAVGLDDIRYSSD--NAYRDPTYDYASSVKTYNIELKPLFS 107

Query: 567 AFKPRTFSIIVLRSLLTSYLPIVEQNI 647
           AF P+T  +  LR+L+  YLP++E ++
Sbjct: 108 AFSPKTLGMTTLRALVMFYLPLLEPHL 134


>ref|NP_001142574.1| uncharacterized protein LOC100274835 [Zea mays]
           gi|195606658|gb|ACG25159.1| hypothetical protein [Zea
           mays]
          Length = 330

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
 Frame = +3

Query: 279 MSGIAGFVDLLKKG-SMQXXXXXXXXXXXXXXXXXXXXTFASQHLFSALGGTVAYGDVAA 455
           M+GIA  +DLL K  +                       FAS+ LF +    VAY D AA
Sbjct: 1   MAGIAIVLDLLNKSHNKHAFHSSSSLSSAAAVSAFASAPFASRFLFGSFEPRVAYCDAAA 60

Query: 456 SVDEADFNPNIYS------PLRVPAFEATTLKTYHAETKPILSAFKPRTFSIIVLRSLLT 617
           ++D+ D+   I         L+ P +  T+ K Y+ + KP+ SAF+ R  ++  +RSLL 
Sbjct: 61  AIDD-DYLAAIRKMSADTLQLQTPTYIPTSSKVYNIQPKPLFSAFEFRALAMTTVRSLLM 119

Query: 618 SYLPIVE 638
            YLP++E
Sbjct: 120 FYLPLLE 126


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