BLASTX nr result
ID: Ephedra27_contig00009250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00009250
(551 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 145 6e-33
gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus pe... 144 2e-32
ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subun... 143 3e-32
sp|Q39290.1|RPAB5_BRANA RecName: Full=DNA-directed RNA polymeras... 142 4e-32
ref|XP_001769186.1| predicted protein [Physcomitrella patens] gi... 142 4e-32
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 142 4e-32
gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao] 142 5e-32
ref|XP_004138685.1| PREDICTED: DNA-directed RNA polymerases I, I... 142 5e-32
ref|XP_006417353.1| hypothetical protein EUTSA_v10009269mg [Eutr... 142 7e-32
ref|XP_003517695.1| PREDICTED: uncharacterized LOC100527000 [Gly... 142 7e-32
ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subun... 141 9e-32
ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutr... 141 9e-32
gb|AFK37774.1| unknown [Lotus japonicus] gi|388514409|gb|AFK4526... 141 9e-32
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 141 9e-32
ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|5... 141 9e-32
ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subun... 141 1e-31
gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus... 141 1e-31
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 140 2e-31
ref|NP_176363.1| DNA-directed RNA polymerase subunit 10-like pro... 140 2e-31
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A... 140 2e-31
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 145 bits (366), Expect = 6e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSDN 285
NYNTLE+SDN
Sbjct: 61 NYNTLEKSDN 70
>gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 144 bits (362), Expect = 2e-32
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSDN 285
NYNTLE+S+N
Sbjct: 61 NYNTLEKSEN 70
>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
isoform X1 [Glycine max]
gi|571449916|ref|XP_006578279.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X2
[Glycine max] gi|571449919|ref|XP_006578280.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein-like isoform X3 [Glycine max]
gi|571449921|ref|XP_006578281.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X4
[Glycine max]
Length = 71
Score = 143 bits (360), Expect = 3e-32
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTL++SD
Sbjct: 61 NYNTLDKSD 69
>sp|Q39290.1|RPAB5_BRANA RecName: Full=DNA-directed RNA polymerases I, II, and III subunit
RPABC5; Short=RNA polymerases I, II, and III subunit
ABC5; AltName: Full=ABC10; AltName: Full=DNA-directed
RNA polymerase III subunit L; AltName: Full=RPB10
homolog gi|533690|gb|AAA21279.1| RNA polymerase II
subunit RPB10 homolog; similar to yeast RNA polymerase
II subunit RPB10, Swiss-Prot Accession Number P22139
[Brassica napus]
Length = 71
Score = 142 bits (359), Expect = 4e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWDAYLDLLQ DY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSDN 285
NYNTLE+SDN
Sbjct: 61 NYNTLEKSDN 70
>ref|XP_001769186.1| predicted protein [Physcomitrella patens]
gi|162679612|gb|EDQ66058.1| predicted protein
[Physcomitrella patens]
Length = 73
Score = 142 bits (359), Expect = 4e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADYSEGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALALVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSDN 285
NYNTLER++N
Sbjct: 61 NYNTLERNEN 70
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 142 bits (359), Expect = 4e-32
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTLERS+
Sbjct: 61 NYNTLERSE 69
>gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 113
Score = 142 bits (358), Expect = 5e-32
Identities = 65/70 (92%), Positives = 69/70 (98%)
Frame = +1
Query: 73 KMIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKL 252
+MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKL
Sbjct: 42 RMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 101
Query: 253 LNYNTLERSD 282
LNYNTLE+S+
Sbjct: 102 LNYNTLEKSE 111
>ref|XP_004138685.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Cucumis sativus]
gi|449522728|ref|XP_004168378.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5-like
[Cucumis sativus]
Length = 71
Score = 142 bits (358), Expect = 5e-32
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTL++SD
Sbjct: 61 NYNTLDKSD 69
>ref|XP_006417353.1| hypothetical protein EUTSA_v10009269mg [Eutrema salsugineum]
gi|557095124|gb|ESQ35706.1| hypothetical protein
EUTSA_v10009269mg [Eutrema salsugineum]
Length = 71
Score = 142 bits (357), Expect = 7e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWDAYLDLLQ DY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALQLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSDN 285
NYNTLE+SDN
Sbjct: 61 NYNTLEKSDN 70
>ref|XP_003517695.1| PREDICTED: uncharacterized LOC100527000 [Glycine max]
gi|356502404|ref|XP_003520009.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like [Glycine
max] gi|255631340|gb|ACU16037.1| unknown [Glycine max]
Length = 71
Score = 142 bits (357), Expect = 7e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTL++SD
Sbjct: 61 NYNTLDKSD 69
>ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Oryza brachyantha]
Length = 74
Score = 141 bits (356), Expect = 9e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTLE++D
Sbjct: 61 NYNTLEKTD 69
>ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutrema salsugineum]
gi|557088483|gb|ESQ29263.1| hypothetical protein
EUTSA_v10023792mg [Eutrema salsugineum]
Length = 71
Score = 141 bits (356), Expect = 9e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNT+E+SD
Sbjct: 61 NYNTMEKSD 69
>gb|AFK37774.1| unknown [Lotus japonicus] gi|388514409|gb|AFK45266.1| unknown
[Lotus japonicus]
Length = 71
Score = 141 bits (356), Expect = 9e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQ+DYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDPYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTL++SD
Sbjct: 61 NYNTLDKSD 69
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
unnamed protein product [Vitis vinifera]
gi|508787490|gb|EOY34746.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 71
Score = 141 bits (356), Expect = 9e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTLE+S+
Sbjct: 61 NYNTLEKSE 69
>ref|XP_002326311.1| predicted protein [Populus trichocarpa]
gi|566176261|ref|XP_006381558.1| hypothetical protein
POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 141 bits (356), Expect = 9e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTLE+S+
Sbjct: 61 NYNTLEKSE 69
>ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Citrus sinensis]
Length = 71
Score = 141 bits (355), Expect = 1e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYPEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTL++SD
Sbjct: 61 NYNTLDKSD 69
>gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus vulgaris]
Length = 71
Score = 141 bits (355), Expect = 1e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYN L++SD
Sbjct: 61 NYNALDKSD 69
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 140 bits (354), Expect = 2e-31
Identities = 64/70 (91%), Positives = 69/70 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSDN 285
NYNTLE++++
Sbjct: 61 NYNTLEKTES 70
>ref|NP_176363.1| DNA-directed RNA polymerase subunit 10-like protein [Arabidopsis
thaliana] gi|297840381|ref|XP_002888072.1| predicted
protein [Arabidopsis lyrata subsp. lyrata]
gi|565487951|ref|XP_006301615.1| hypothetical protein
CARUB_v10022056mg [Capsella rubella]
gi|11134747|sp|Q9SYA6.1|RPBAL_ARATH RecName:
Full=DNA-directed RNA polymerase subunit 10-like
protein; AltName: Full=ABC10; AltName: Full=DNA-directed
RNA polymerase III subunit L; AltName: Full=DNA-directed
RNA polymerases I, II, and III subunit RPABC5; Short=RNA
polymerases I, II, and III subunit ABC5; AltName:
Full=RPB10 homolog gi|4508082|gb|AAD21426.1| Putative
RNA polymerase II subunit Rpb10 [Arabidopsis thaliana]
gi|297333913|gb|EFH64331.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|332195756|gb|AEE33877.1| DNA-directed RNA polymerases
II-like protein of unknown function [Arabidopsis
thaliana] gi|482570325|gb|EOA34513.1| hypothetical
protein CARUB_v10022056mg [Capsella rubella]
Length = 71
Score = 140 bits (353), Expect = 2e-31
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MI+PVRCFTCGKVIGNKWD YL+LLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIVPVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNT+E+SD
Sbjct: 61 NYNTMEKSD 69
>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 140 bits (353), Expect = 2e-31
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +1
Query: 76 MIIPVRCFTCGKVIGNKWDAYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 255
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 256 NYNTLERSD 282
NYNTLE+++
Sbjct: 61 NYNTLEKNE 69