BLASTX nr result
ID: Ephedra27_contig00009108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00009108 (554 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22098.1| unknown [Picea sitchensis] 112 6e-23 ref|XP_001756061.1| predicted protein [Physcomitrella patens] gi... 93 4e-17 >gb|ABK22098.1| unknown [Picea sitchensis] Length = 140 Score = 112 bits (280), Expect = 6e-23 Identities = 69/144 (47%), Positives = 90/144 (62%), Gaps = 11/144 (7%) Frame = +1 Query: 154 MAATSAMLHTLPS-HTTAIAYR---------HTIPLS-HRSSTQQHKQLSLRRGTPYLIX 300 MA A+LH++PS H A++ H IPL+ + ++ LS RR T Sbjct: 1 MACAYAVLHSIPSQHKKLEAFQPFTGLRRGLHGIPLNPFWNIGGRNHMLSGRRATK---- 56 Query: 301 XXXXXLQRRAALPVISAIPVVGPITNFVTNPFVLSFLYLIGAIRFVSGFSKTTFSDTLLV 480 +Q RA LPV+S IPVVGPI NFV +P +L +Y+ GAIRF SGFS+T +SDTL Sbjct: 57 ----RVQTRAGLPVVSNIPVVGPILNFVISPTLLIAIYVFGAIRFQSGFSRTIYSDTLAN 112 Query: 481 RFGLAAIWPVLFVISKRFRENFKK 552 R GL AIWPVLF++SK FRENF++ Sbjct: 113 RVGLTAIWPVLFLLSKAFRENFQR 136 >ref|XP_001756061.1| predicted protein [Physcomitrella patens] gi|162692571|gb|EDQ78927.1| predicted protein [Physcomitrella patens] Length = 151 Score = 93.2 bits (230), Expect = 4e-17 Identities = 41/76 (53%), Positives = 54/76 (71%) Frame = +1 Query: 325 RAALPVISAIPVVGPITNFVTNPFVLSFLYLIGAIRFVSGFSKTTFSDTLLVRFGLAAIW 504 RA LPVIS++PV+GP+ N V NP +L +Y GA RF SGF KTT++D + + A+W Sbjct: 73 RAGLPVISSVPVLGPLANAVFNPVLLFIVYAAGAFRFYSGFKKTTYADNSATKISMTALW 132 Query: 505 PVLFVISKRFRENFKK 552 PVLF+ SK +R NFKK Sbjct: 133 PVLFIASKAYRNNFKK 148