BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00009074
         (540 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17840.1| unknown [Picea sitchensis]                             213   3e-53
gb|ABR16646.1| unknown [Picea sitchensis]                             213   3e-53
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        192   4e-47
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   192   5e-47
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   191   9e-47
ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Caps...   191   9e-47
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   190   2e-46
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   190   2e-46
gb|ESW16271.1| hypothetical protein PHAVU_007G142900g [Phaseolus...   189   3e-46
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   189   3e-46
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   189   5e-46
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   188   6e-46
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab...   188   8e-46
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   187   1e-45
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     187   1e-45
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   187   1e-45
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   187   1e-45
dbj|BAC43527.1| putative plastid RNA polymerase sigma-subunit SI...   186   2e-45
ref|NP_172330.1| RNA polymerase sigma subunit 2 [Arabidopsis tha...   186   2e-45

>gb|ABR17840.1| unknown [Picea sitchensis]
          Length = 495

 Score =  213 bits (541), Expect = 3e-53
 Identities = 95/177 (53%), Positives = 137/177 (77%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA+EE+  SR +QDL KL+RI+ +YK+K GKEPT+ QWAE +G+DQK+L+ RLE G 
Sbjct: 196 RLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKMRLEVGR 255

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
           +S  K+++CNLRLV+S+A  YQN G+ LQDL+QAG +GL+R  EKFD +RGF+FSTYA+W
Sbjct: 256 DSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKFSTYAYW 315

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WIRQ++ K LT QS+ + +P + VE+ +++R    L  ++H R PT +E++++ G S
Sbjct: 316 WIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVAGIS 372


>gb|ABR16646.1| unknown [Picea sitchensis]
          Length = 592

 Score =  213 bits (541), Expect = 3e-53
 Identities = 95/177 (53%), Positives = 137/177 (77%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA+EE+  SR +QDL KL+RI+ +YK+K GKEPT+ QWAE +G+DQK+L+ RLE G 
Sbjct: 293 RLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKMRLEVGR 352

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
           +S  K+++CNLRLV+S+A  YQN G+ LQDL+QAG +GL+R  EKFD +RGF+FSTYA+W
Sbjct: 353 DSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKFSTYAYW 412

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WIRQ++ K LT QS+ + +P + VE+ +++R    L  ++H R PT +E++++ G S
Sbjct: 413 WIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVAGIS 469


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  192 bits (488), Expect = 4e-47
 Identities = 89/177 (50%), Positives = 126/177 (71%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTANEE+  S  +QDL KLER++++  ++ G +PT  QWA A G+DQK+LR RL  G 
Sbjct: 313 RLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGV 372

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 373 HCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 432

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++++ +     ++ R P  +E+++ TG S
Sbjct: 433 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLS 489


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  192 bits (487), Expect = 5e-47
 Identities = 91/177 (51%), Positives = 126/177 (71%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTANEEI  S  +Q+L KLE+++++   + G +PTI QWA A G+DQK+LRKR+  G 
Sbjct: 102 RLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQWAAAAGVDQKTLRKRINYGI 161

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 162 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLVRGAEKFDASKGFKFSTYAHW 221

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++R+ K      + R P  +E+++ TG S
Sbjct: 222 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLS 278


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
           gi|482575837|gb|EOA40024.1| hypothetical protein
           CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  191 bits (485), Expect = 9e-47
 Identities = 88/177 (49%), Positives = 126/177 (71%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           +LLT  EE   S  +QDL KLER++ +  ++ G++PT +QWA A G+DQKSLRKR+  G 
Sbjct: 270 KLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGT 329

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
           + + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 330 QCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 389

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+++ +P + VEA  ++++ +     +  R P  +E+++ TG S
Sbjct: 390 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLS 446


>ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
           gi|482575836|gb|EOA40023.1| hypothetical protein
           CARUB_v10008711mg [Capsella rubella]
          Length = 487

 Score =  191 bits (485), Expect = 9e-47
 Identities = 88/177 (49%), Positives = 126/177 (71%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           +LLT  EE   S  +QDL KLER++ +  ++ G++PT +QWA A G+DQKSLRKR+  G 
Sbjct: 270 KLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGT 329

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
           + + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 330 QCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 389

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+++ +P + VEA  ++++ +     +  R P  +E+++ TG S
Sbjct: 390 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLS 446


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  190 bits (483), Expect = 2e-46
 Identities = 89/177 (50%), Positives = 124/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLT  EEI  S  +QDL KLE+I++   ++ G +PT  QWA   G+DQK+LRKRL  G 
Sbjct: 265 RLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYGI 324

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLV+G EKFDGT+GF+FSTYAHW
Sbjct: 325 FCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHW 384

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++++ +     ++ R P  +E+++ TG S
Sbjct: 385 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLS 441


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
           subsp. vesca]
          Length = 616

 Score =  190 bits (483), Expect = 2e-46
 Identities = 90/177 (50%), Positives = 124/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTANEEI  S  +Q+L KLE++++    + G +PT  QWA A G+DQK+LRKR+  G 
Sbjct: 317 RLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGI 376

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 377 MCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 436

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++R+ K      + R P  +E+++ TG S
Sbjct: 437 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLS 493


>gb|ESW16271.1| hypothetical protein PHAVU_007G142900g [Phaseolus vulgaris]
          Length = 1302

 Score =  189 bits (481), Expect = 3e-46
 Identities = 89/177 (50%), Positives = 124/177 (70%)
 Frame = +3

Query: 9    RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
            RLLT+ EEI  S  +QDL KLERI++   ++ G +PT  QWA   G+DQK+LRKRL  G 
Sbjct: 1003 RLLTSTEEIKLSEGIQDLLKLERIQEDLVERCGGQPTFAQWAAVAGVDQKTLRKRLSHGR 1062

Query: 189  ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
              + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLV+G EKFDGT+GF+FSTYAHW
Sbjct: 1063 FCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHW 1122

Query: 369  WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
            WI+QAV K+L+ QS+ + +P + VEA  ++++ +     ++ R P  +E+++  G S
Sbjct: 1123 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEAAGLS 1179


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
           lycopersicum]
          Length = 613

 Score =  189 bits (480), Expect = 3e-46
 Identities = 90/177 (50%), Positives = 126/177 (71%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA+EE   SR +QDL KLER++ +  ++ G +PT  QWA A G+DQ +LRKRL  G 
Sbjct: 314 RLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGI 373

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ +G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 374 LCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 433

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++++ +   + ++ R P   E+++ TG S
Sbjct: 434 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLS 490


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
           gi|557095448|gb|ESQ36030.1| hypothetical protein
           EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  189 bits (479), Expect = 5e-46
 Identities = 87/177 (49%), Positives = 125/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           +LLTA EE   S  +QDL KLER++ +  ++ G +PT  QWA A G+DQKSLRKR+  G 
Sbjct: 280 KLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTFAQWASAAGVDQKSLRKRINYGT 339

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
           + + +M+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 340 QCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 399

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+++ +P + VEA  ++++ +     +  + P  +E+++ TG S
Sbjct: 400 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEEVAEATGLS 456


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
           tuberosum]
          Length = 613

 Score =  188 bits (478), Expect = 6e-46
 Identities = 89/177 (50%), Positives = 126/177 (71%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA+EE   SR +QDL KLER++ +  ++ G +PT  QWA A G+DQ +LRKRL  G 
Sbjct: 314 RLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGI 373

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ +G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 374 LCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 433

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+++ +P + VEA  ++++ +   + ++ R P   E+++  G S
Sbjct: 434 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLS 490


>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
           lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
           ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  188 bits (477), Expect = 8e-46
 Identities = 87/177 (49%), Positives = 124/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           +LLT  EE   S  +QDL KLER++ +  ++ G++PT  QWA A G+DQKSLRKR+  G 
Sbjct: 271 KLLTVREEHELSAGIQDLLKLERLQTELTERCGRQPTFAQWASAAGVDQKSLRKRIHHGT 330

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 331 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 390

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+++ +P + VEA  ++++ +     +  + P  +E+++ TG S
Sbjct: 391 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLS 447


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
           gi|548831956|gb|ERM94758.1| hypothetical protein
           AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  187 bits (476), Expect = 1e-45
 Identities = 87/177 (49%), Positives = 125/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           +LLTA EE+  S  +QDL KLE++ ++  ++ G EPT  QWA A GIDQK+LR+RL  G 
Sbjct: 270 KLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGT 329

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ +G+ +QDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 330 HCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 389

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + V+A  ++R+       ++ R P  +E+++ TG S
Sbjct: 390 WIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLS 446


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  187 bits (475), Expect = 1e-45
 Identities = 87/177 (49%), Positives = 125/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA EEI  S  +QDL KLE+++++  ++ G  PT  QWA A G+DQK+LR+R+  G 
Sbjct: 274 RLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGI 333

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 334 LCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 393

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++++ +     ++ R P  +E+++ TG S
Sbjct: 394 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLS 450


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  187 bits (475), Expect = 1e-45
 Identities = 85/177 (48%), Positives = 125/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA EE+  S  +QDL KLE++++  +++ G +PT  QWA A G+DQK+LR+R   G 
Sbjct: 276 RLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGI 335

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ +QDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 336 RCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 395

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++++ +     ++ R P  +E+++ TG S
Sbjct: 396 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 452


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  187 bits (475), Expect = 1e-45
 Identities = 85/177 (48%), Positives = 125/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA EE+  S  +QDL KLE++++  +++ G +PT  QWA A G+DQK+LR+R   G 
Sbjct: 279 RLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGI 338

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ +QDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 339 RCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 398

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++++ +     ++ R P  +E+++ TG S
Sbjct: 399 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 455


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
           gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
           rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  187 bits (475), Expect = 1e-45
 Identities = 86/177 (48%), Positives = 126/177 (71%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           RLLTA+EE+  S  +QDL KLER++++  ++ G +PT  QWA A G+DQ++LRKR+  G 
Sbjct: 270 RLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGT 329

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 330 ICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 389

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+ + +P + VEA  ++++ +     ++ R P  +E+++  G S
Sbjct: 390 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLS 446


>dbj|BAC43527.1| putative plastid RNA polymerase sigma-subunit SIG1 [Arabidopsis
           thaliana]
          Length = 572

 Score =  186 bits (473), Expect = 2e-45
 Identities = 86/177 (48%), Positives = 124/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           +LLT  EE   S  +QDL KLER++ +  ++ G++PT  QWA A G+DQKSLR+R+  G 
Sbjct: 271 KLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGT 330

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 331 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 390

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+++ +P + VEA  ++++ +     +  + P  +E+++ TG S
Sbjct: 391 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLS 447


>ref|NP_172330.1| RNA polymerase sigma subunit 2 [Arabidopsis thaliana]
           gi|75219074|sp|O22056.2|SIGB_ARATH RecName: Full=RNA
           polymerase sigma factor sigB; Short=Sigma factor B;
           Short=Sigma-B; AltName: Full=Protein ABERRANT
           CHLOROPLAST 1; AltName: Full=RNA polymerase sigma factor
           sig1; Short=Atsig1; Short=Sigma factor 1; AltName:
           Full=RNA polymerase sigma factor sig2; Short=Atsig2;
           Short=Sigma factor 2; AltName: Full=RNA polymerase sigma
           factor sigA; Short=Sigma factor A; Short=Sigma-A; Flags:
           Precursor gi|6664315|gb|AAF22897.1|AC006932_14 T27G7.22
           [Arabidopsis thaliana]
           gi|9802550|gb|AAF99752.1|AC003981_2 F22O13.2
           [Arabidopsis thaliana] gi|2443357|dbj|BAA22427.1| SigB
           [Arabidopsis thaliana] gi|2597831|emb|CAA75584.1| sigma
           factor [Arabidopsis thaliana] gi|2879922|dbj|BAA24825.1|
           plastid RNA polymerase sigma-subunit [Arabidopsis
           thaliana] gi|5478446|dbj|BAA82449.1| sigma factor SigB
           [Arabidopsis thaliana] gi|133778838|gb|ABO38759.1|
           At1g08540 [Arabidopsis thaliana]
           gi|332190182|gb|AEE28303.1| RNA polymerase sigma subunit
           2 [Arabidopsis thaliana]
          Length = 572

 Score =  186 bits (473), Expect = 2e-45
 Identities = 86/177 (48%), Positives = 124/177 (70%)
 Frame = +3

Query: 9   RLLTANEEISFSRKVQDLHKLERIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 188
           +LLT  EE   S  +QDL KLER++ +  ++ G++PT  QWA A G+DQKSLR+R+  G 
Sbjct: 271 KLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGT 330

Query: 189 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCVGLVRGIEKFDGTRGFRFSTYAHW 368
             + KM+  N+RLV+SIA  YQ  G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 331 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 390

Query: 369 WIRQAVNKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 539
           WI+QAV K+L+ QS+++ +P + VEA  ++++ +     +  + P  +E+++ TG S
Sbjct: 391 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLS 447