BLASTX nr result
ID: Ephedra27_contig00009052
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00009052
(1408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFT82650.1| C3H47 C3H type transcription factor, partial [Zea... 72 7e-10
dbj|BAJ85837.1| predicted protein [Hordeum vulgare subsp. vulgar... 70 3e-09
ref|XP_002993351.1| hypothetical protein SELMODRAFT_449116 [Sela... 69 4e-09
gb|EPS67507.1| hypothetical protein M569_07268 [Genlisea aurea] 69 5e-09
gb|EOX99481.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 67 1e-08
ref|XP_004971733.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 66 3e-08
ref|XP_004960911.1| PREDICTED: zinc finger CCCH domain-containin... 66 3e-08
ref|XP_003620782.1| Zinc finger CCCH domain-containing protein [... 66 3e-08
ref|NP_001146853.1| nucleic acid binding protein [Zea mays] gi|1... 66 3e-08
gb|ACF82790.1| unknown [Zea mays] 66 3e-08
ref|NP_001042276.1| Os01g0192000 [Oryza sativa Japonica Group] g... 66 4e-08
ref|XP_004288807.1| PREDICTED: zinc finger CCCH domain-containin... 66 4e-08
ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin... 66 4e-08
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera] 66 4e-08
gb|EAY72862.1| hypothetical protein OsI_00733 [Oryza sativa Indi... 66 4e-08
gb|EMT05920.1| hypothetical protein F775_52289 [Aegilops tauschii] 65 9e-08
ref|XP_006408830.1| hypothetical protein EUTSA_v10002045mg [Eutr... 64 1e-07
ref|XP_002972737.1| hypothetical protein SELMODRAFT_441947 [Sela... 64 1e-07
gb|ACN34007.1| unknown [Zea mays] gi|407232614|gb|AFT82649.1| C3... 64 2e-07
gb|EPS57796.1| hypothetical protein M569_17020, partial [Genlise... 63 3e-07
>gb|AFT82650.1| C3H47 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413947605|gb|AFW80254.1| hypothetical protein
ZEAMMB73_899917 [Zea mays] gi|413947606|gb|AFW80255.1|
hypothetical protein ZEAMMB73_899917 [Zea mays]
Length = 378
Score = 71.6 bits (174), Expect = 7e-10
Identities = 42/79 (53%), Positives = 48/79 (60%), Gaps = 11/79 (13%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSP--SSPSARTIHRIPES---------K 1260
RYRTQPCKDG C RR+CFFAHT +QLR + +P SS S R +PES
Sbjct: 147 RYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPTPQQSSASPRGAGALPESYDGSPLRRQA 206
Query: 1259 TITNLAKSSVMSSPTSTLI 1203
T L KS V SSPTSTL+
Sbjct: 207 FETYLTKSIVSSSPTSTLL 225
>dbj|BAJ85837.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511998|dbj|BAJ95980.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326518592|dbj|BAJ88325.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 69.7 bits (169), Expect = 3e-09
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPES---------KTI 1254
RYRTQPCKDG C RR+CFFAHT +QLR + SSP + + + ES
Sbjct: 145 RYRTQPCKDGTACRRRVCFFAHTPDQLRAMPSQHSSPRSTPLSPLAESYDGSPLRRQAFE 204
Query: 1253 TNLAKSSVMSSPTSTLI 1203
+ L+KS + SSPTSTL+
Sbjct: 205 SYLSKSIMSSSPTSTLL 221
>ref|XP_002993351.1| hypothetical protein SELMODRAFT_449116 [Selaginella moellendorffii]
gi|300138782|gb|EFJ05536.1| hypothetical protein
SELMODRAFT_449116 [Selaginella moellendorffii]
Length = 581
Score = 69.3 bits (168), Expect = 4e-09
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNV----EGSPSSPSARTIHRIPESKTITN--L 1245
RYRTQPCKDGR+C RR+CFFAHT+EQLR + + +SPS+ T P S + +N
Sbjct: 189 RYRTQPCKDGRSCKRRVCFFAHTSEQLRLLPQVSQAMSNSPSSTTSSSSPPSSSSSNALF 248
Query: 1244 AKSSVMSSPTSTL 1206
+ S SSP+ +L
Sbjct: 249 SSSPCSSSPSPSL 261
>gb|EPS67507.1| hypothetical protein M569_07268 [Genlisea aurea]
Length = 343
Score = 68.9 bits (167), Expect = 5e-09
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPESKTITNLAK--SS 1233
RYRT+ CKDG+NC R++CFFAH+T QLR + +P SP + +R + + N S
Sbjct: 151 RYRTEACKDGKNCKRKVCFFAHSTRQLRILPENPPSPPLNSPNREKRYQNLNNCCVFCHS 210
Query: 1232 VMSSPTSTLI 1203
V SPTSTLI
Sbjct: 211 VNPSPTSTLI 220
>gb|EOX99481.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative [Theobroma
cacao]
Length = 365
Score = 67.4 bits (163), Expect = 1e-08
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNV-EGSPSSPSARTIHRIPESKT-ITNLAKSS 1233
RYRT+ CKDG+NC R+ICFFAH++ +LR + +GSP ++ + P +K L S
Sbjct: 152 RYRTEACKDGKNCKRKICFFAHSSRELRLLPDGSPKYKNSGSCSSSPMNKNDHCCLFCHS 211
Query: 1232 VMSSPTSTLIGLA 1194
V SSPTSTL+GL+
Sbjct: 212 VTSSPTSTLLGLS 224
>ref|XP_004971733.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 2-like [Setaria italica]
Length = 304
Score = 66.2 bits (160), Expect = 3e-08
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 11/79 (13%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPESKTI--------- 1254
RYRTQPCKDG C RR+CFFAHT +QLR + SSP P +++
Sbjct: 74 RYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPQQSSPRGTAAAASPLAESYDGSPLRRQA 133
Query: 1253 --TNLAKSSVMSSPTSTLI 1203
+ L KS + SSPTSTL+
Sbjct: 134 FESYLTKSIMSSSPTSTLM 152
>ref|XP_004960911.1| PREDICTED: zinc finger CCCH domain-containing protein 35-like
[Setaria italica]
Length = 390
Score = 66.2 bits (160), Expect = 3e-08
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVE---------GSPSSPSARTIHRIPESKTI 1254
RYRTQPCKDG C RR+CFFAHT +QLR + G+ SSP A + P +
Sbjct: 143 RYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPQQQSSPRGGAASSPLAESYDGSPLRRQA 202
Query: 1253 --TNLAKSSVM-SSPTSTLI 1203
+ L KS +M SSPTSTL+
Sbjct: 203 FESYLTKSGIMSSSPTSTLV 222
>ref|XP_003620782.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355495797|gb|AES77000.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 377
Score = 66.2 bits (160), Expect = 3e-08
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLR-NVEGSPS------SPSARTIHRIPESKTITN 1248
RYRTQPCKDG +C RR+CFFAHT EQLR NV+ SPS SP + + + TIT
Sbjct: 178 RYRTQPCKDGTSCRRRVCFFAHTPEQLRLNVQQSPSSSRSVNSPDSYDGSPLRQMVTITT 237
Query: 1247 LAKSSVMSSPTSTLI 1203
+S MS S ++
Sbjct: 238 PPESPPMSPMASEMV 252
>ref|NP_001146853.1| nucleic acid binding protein [Zea mays] gi|195604252|gb|ACG23956.1|
nucleic acid binding protein [Zea mays]
gi|414875899|tpg|DAA53030.1| TPA: nucleic acid binding
protein [Zea mays]
Length = 370
Score = 66.2 bits (160), Expect = 3e-08
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSP-----------SSPSARTIHRIPESK 1260
RYRTQPCKDG C RR+CFFAHT +QLR + +P SSP A + P +
Sbjct: 147 RYRTQPCKDGTACRRRVCFFAHTADQLRVLPPTPQQQSSPRGAACSSPLAESYDGSPLRR 206
Query: 1259 TI--TNLAKSSVMSSPTSTLI 1203
+ L KS + SSPTSTL+
Sbjct: 207 QAFESYLTKSIMCSSPTSTLL 227
>gb|ACF82790.1| unknown [Zea mays]
Length = 296
Score = 66.2 bits (160), Expect = 3e-08
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSP-----------SSPSARTIHRIPESK 1260
RYRTQPCKDG C RR+CFFAHT +QLR + +P SSP A + P +
Sbjct: 73 RYRTQPCKDGTACRRRVCFFAHTADQLRVLPPTPQQQSSPRGAACSSPLAESYDGSPLRR 132
Query: 1259 TI--TNLAKSSVMSSPTSTLI 1203
+ L KS + SSPTSTL+
Sbjct: 133 QAFESYLTKSIMCSSPTSTLL 153
>ref|NP_001042276.1| Os01g0192000 [Oryza sativa Japonica Group]
gi|75262988|sp|Q9FU27.1|C3H2_ORYSJ RecName: Full=Zinc
finger CCCH domain-containing protein 2; Short=OsC3H2;
AltName: Full=Protein DELAY OF THE ONSET OF SENESCENCE;
Short=OsDOS gi|9988428|dbj|BAB12694.1| CCCH-type zinc
finger protein -like [Oryza sativa Japonica Group]
gi|113531807|dbj|BAF04190.1| Os01g0192000 [Oryza sativa
Japonica Group] gi|215704729|dbj|BAG94757.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|323388889|gb|ADX60249.1| C3H transcription factor
[Oryza sativa Japonica Group]
Length = 386
Score = 65.9 bits (159), Expect = 4e-08
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPES---------KTI 1254
RYRTQPCKDG C RR+CFFAHT +QLR + SSP + + ES
Sbjct: 151 RYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFE 210
Query: 1253 TNLAKSSVMSSPTSTLI 1203
+ L K+ + SSPTSTL+
Sbjct: 211 SYLTKTIMSSSPTSTLM 227
>ref|XP_004288807.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Fragaria vesca subsp. vesca]
Length = 215
Score = 65.9 bits (159), Expect = 4e-08
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLR-----NVEGSPSSPSARTIHRIPESKTITNLA 1242
RYRTQPCKDG +C RR+CFFAHT EQLR + GS S P R++ R +++ +
Sbjct: 125 RYRTQPCKDGTSCKRRVCFFAHTPEQLRVLPQQSPRGSNSPPMTRSVSRSLGLSSVSEMV 184
Query: 1241 KS--SVMSSPTS 1212
S V S PTS
Sbjct: 185 ASLRKVKSLPTS 196
>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
vinifera]
Length = 379
Score = 65.9 bits (159), Expect = 4e-08
Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNV-EGSP-SSPSARTIHRIPESKTI-TNLAKS 1236
RYRTQPCKDG C RR+CFFAHT EQLR + + SP + SA + P L+K
Sbjct: 166 RYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKG 225
Query: 1235 SVMSSPTSTLI 1203
S +SSPTSTLI
Sbjct: 226 SFISSPTSTLI 236
>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
Length = 426
Score = 65.9 bits (159), Expect = 4e-08
Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNV-EGSP-SSPSARTIHRIPESKTI-TNLAKS 1236
RYRTQPCKDG C RR+CFFAHT EQLR + + SP + SA + P L+K
Sbjct: 213 RYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKG 272
Query: 1235 SVMSSPTSTLI 1203
S +SSPTSTLI
Sbjct: 273 SFISSPTSTLI 283
>gb|EAY72862.1| hypothetical protein OsI_00733 [Oryza sativa Indica Group]
Length = 386
Score = 65.9 bits (159), Expect = 4e-08
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPES---------KTI 1254
RYRTQPCKDG C RR+CFFAHT +QLR + SSP + + ES
Sbjct: 151 RYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFE 210
Query: 1253 TNLAKSSVMSSPTSTLI 1203
+ L K+ + SSPTSTL+
Sbjct: 211 SYLTKTIMSSSPTSTLM 227
>gb|EMT05920.1| hypothetical protein F775_52289 [Aegilops tauschii]
Length = 338
Score = 64.7 bits (156), Expect = 9e-08
Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPES---------KTI 1254
RY T PCKDG C RR+CFFAHT +QLR + SSP + + + ES
Sbjct: 105 RYPTTPCKDGTACRRRVCFFAHTPDQLRAMPSQHSSPRSTPLSPLAESYDGSPLRRQAFE 164
Query: 1253 TNLAKSSVMSSPTSTLI 1203
+ L+KS + SSPTSTL+
Sbjct: 165 SYLSKSIMSSSPTSTLL 181
>ref|XP_006408830.1| hypothetical protein EUTSA_v10002045mg [Eutrema salsugineum]
gi|557109986|gb|ESQ50283.1| hypothetical protein
EUTSA_v10002045mg [Eutrema salsugineum]
Length = 316
Score = 64.3 bits (155), Expect = 1e-07
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPESKTITNLAKSSVM 1227
RYRTQPCKDG +C RRICFFAHT EQLR + S + R SK+ T + +S++
Sbjct: 159 RYRTQPCKDGTSCRRRICFFAHTPEQLRFLANSAEPDLGLSSIRNHFSKSATATSPTSIL 218
Query: 1226 SSP 1218
SP
Sbjct: 219 ISP 221
>ref|XP_002972737.1| hypothetical protein SELMODRAFT_441947 [Selaginella moellendorffii]
gi|300159338|gb|EFJ25958.1| hypothetical protein
SELMODRAFT_441947 [Selaginella moellendorffii]
Length = 581
Score = 64.3 bits (155), Expect = 1e-07
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 6/72 (8%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNV----EGSPSSPSARTIHRIPESKTITNLAK 1239
RYRTQPCKDGR+C RR+CFFAHT+EQLR + + +SPS+ T P S + + +
Sbjct: 190 RYRTQPCKDGRSCKRRVCFFAHTSEQLRLLPQVSQAMSNSPSSTT----PSSSSPPSSSS 245
Query: 1238 SSVM--SSPTST 1209
S+ + SSP S+
Sbjct: 246 SNALFSSSPCSS 257
>gb|ACN34007.1| unknown [Zea mays] gi|407232614|gb|AFT82649.1| C3H39 C3H type
transcription factor, partial [Zea mays subsp. mays]
gi|413944819|gb|AFW77468.1| hypothetical protein
ZEAMMB73_138519 [Zea mays] gi|413944820|gb|AFW77469.1|
hypothetical protein ZEAMMB73_138519 [Zea mays]
Length = 394
Score = 63.5 bits (153), Expect = 2e-07
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVEGSPSSPSARTIHRIPESKTI--------- 1254
RYRTQPCKDG C RR+CFFAHT +QLR SSP P +++
Sbjct: 148 RYRTQPCKDGTGCRRRVCFFAHTPDQLRVPPPRQSSPRGAAAAASPLAESYDGSPLRRQA 207
Query: 1253 --TNLAKSSVMSS--PTSTLI 1203
+ L KS ++SS PTSTL+
Sbjct: 208 FESYLTKSGIVSSPPPTSTLV 228
>gb|EPS57796.1| hypothetical protein M569_17020, partial [Genlisea aurea]
Length = 368
Score = 63.2 bits (152), Expect = 3e-07
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = -3
Query: 1406 RYRTQPCKDGRNCTRRICFFAHTTEQLRNVE-GSPSSPSARTIHRIPESKTITNLAKSSV 1230
RYRTQPCKDG +C RR+CFFAHT EQLR + S +SP A + +S T +
Sbjct: 163 RYRTQPCKDGTHCRRRVCFFAHTPEQLRVLPYSSAASPEASPGRFVQDSNTF--FSAGPF 220
Query: 1229 MSSPTSTL 1206
+SPTS L
Sbjct: 221 GTSPTSAL 228