BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00009021
         (2330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346636.1| PREDICTED: ATP-dependent Clp protease ATP-bi...  1072   0.0  
ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ...  1071   0.0  
ref|XP_004975454.1| PREDICTED: chaperone protein ClpC1, chloropl...  1070   0.0  
gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]       1070   0.0  
ref|XP_004252280.1| PREDICTED: ATP-dependent Clp protease ATP-bi...  1070   0.0  
ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata ...  1070   0.0  
ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloropl...  1069   0.0  
ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloropl...  1069   0.0  
ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [S...  1069   0.0  
ref|XP_006652229.1| PREDICTED: chaperone protein ClpC1, chloropl...  1068   0.0  
ref|XP_006485108.1| PREDICTED: ATP-dependent Clp protease ATP-bi...  1068   0.0  
emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]        1068   0.0  
sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, c...  1068   0.0  
gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japo...  1068   0.0  
ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Sela...  1068   0.0  
ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Sela...  1068   0.0  
ref|XP_004975455.1| PREDICTED: chaperone protein ClpC1, chloropl...  1067   0.0  
sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease...  1067   0.0  
ref|XP_006402040.1| hypothetical protein EUTSA_v10012603mg [Eutr...  1067   0.0  
ref|XP_004297496.1| PREDICTED: chaperone protein ClpC, chloropla...  1064   0.0  

>ref|XP_006346636.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4B, chloroplastic [Solanum tuberosum]
          Length = 923

 Score = 1072 bits (2772), Expect = 0.0
 Identities = 557/739 (75%), Positives = 616/739 (83%)
 Frame = +2

Query: 110  FKVKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGIT 289
            F  KAMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI 
Sbjct: 86   FVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGIN 145

Query: 290  MKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKE 469
            +KDAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++E
Sbjct: 146  LKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLRE 205

Query: 470  GEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTIL 649
            GEGVA +VLE  G D SNIR Q++ +V E  E      G   +  KMPTL+EYGTNLT L
Sbjct: 206  GEGVAARVLENLGADPSNIRTQVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKL 265

Query: 650  AEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPET 829
            AE+GKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PET
Sbjct: 266  AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 325

Query: 830  IENKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXX 1009
            IE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ +IILFIDEVHTL         
Sbjct: 326  IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 385

Query: 1010 XXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRG 1189
                  LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QIL+G
Sbjct: 386  IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKG 445

Query: 1190 LRERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEA 1369
            LRERYE+HHKL YTDEALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LPEEA
Sbjct: 446  LRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 505

Query: 1370 KELGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDT 1549
            KEL  ELR+I++EKN+AVR +DF+KAG L D+ ++LKAQI A+ DK KE  KAE E +DT
Sbjct: 506  KELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADT 565

Query: 1550 GPMVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXX 1729
            GP+VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E            
Sbjct: 566  GPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRA 625

Query: 1730 XXGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLI 1909
              GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLI
Sbjct: 626  RVGLKNPNRPIASFIFSGPTGVGKSELAKALATYYFGSEEAMIRLDMSEFMERHTVSKLI 685

Query: 1910 GSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 2089
            GSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 686  GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 745

Query: 2090 DFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYF 2269
            DFKNTLLIMTSNVGSSVIE        I F LDF    +++D  Y  I  LV EELK+YF
Sbjct: 746  DFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDF----DEKDSSYNRIKSLVTEELKQYF 798

Query: 2270 RPEFLNRLDEIIVFKQLTK 2326
            RPEFLNRLDE+IVF+QLTK
Sbjct: 799  RPEFLNRLDEMIVFRQLTK 817


>ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
            thaliana] gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName:
            Full=Chaperone protein ClpC1, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpC
            homolog 1; AltName: Full=Casein lytic proteinase C1;
            AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
            AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
            Precursor gi|9758239|dbj|BAB08738.1| ATP-dependent Clp
            protease, ATP-binding subunit [Arabidopsis thaliana]
            gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis
            thaliana] gi|110742601|dbj|BAE99213.1| ATP-dependent Clp
            protease [Arabidopsis thaliana]
            gi|332008628|gb|AED96011.1| ATP-dependent Clp protease
            ATP-binding subunit ClpC [Arabidopsis thaliana]
          Length = 929

 Score = 1071 bits (2769), Expect = 0.0
 Identities = 559/765 (73%), Positives = 629/765 (82%), Gaps = 8/765 (1%)
 Frame = +2

Query: 56   TIGTKSMPFRTKTRKQVG--------FKVKAMFDRFTEKAIKVIMLSQEESRRLGHNFVX 211
            T+G     F +K R+ +         F VKAMF+RFTEKAIKVIML+QEE+RRLGHNFV 
Sbjct: 63   TLGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 122

Query: 212  XXXXXXXXXXXXXXXAAKVLKSSGITMKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLE 391
                           AAKVLKS GI +KDAR EVEKIIGRG+G V+VEIPFT RAK VLE
Sbjct: 123  TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 182

Query: 392  LALEEAKQLGHSYIGSEHLLLGLIKEGEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELA 571
            L+LEEA+QLGH+YIGSEHLLLGL++EGEGVA +VLE  G D SNIR Q++ +V E+ E+ 
Sbjct: 183  LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVT 242

Query: 572  YNKAGQNATSGKMPTLDEYGTNLTILAEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLI 751
             N  G  ++S KMPTL+EYGTNLT LAE+GKLDPVVGRQ QIERV QILGRRTKNNPCLI
Sbjct: 243  ANVGG-GSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 301

Query: 752  GEPGVGKTAIAEGLAQRIVSGTIPETIENKKVITLDMGMLVAGTKYRGEFEERIKKLMDE 931
            GEPGVGKTAIAEGLAQRI SG +PETIE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E
Sbjct: 302  GEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 361

Query: 932  VRQNPDIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKD 1111
            +RQ+ +IILFIDEVHTL               LKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 362  IRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 421

Query: 1112 PALERRFQPVQVPEPTVDEAVQILRGLRERYELHHKLNYTDEALVAAAELSSQYISDRFL 1291
            PALERRFQPV+VPEPTVDE +QIL+GLRERYE+HHKL YTDE+LVAAA+LS QYISDRFL
Sbjct: 422  PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFL 481

Query: 1292 PDKAIDLIDEAGSRVRLKHAKLPEEAKELGVELRKISQEKNDAVRNKDFDKAGMLHDQYL 1471
            PDKAIDLIDEAGSRVRL+HA++PEEA+EL  ELR+I++EKN+AVR +DF+KAG L D+ +
Sbjct: 482  PDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREI 541

Query: 1472 ELKAQIAAITDKEKEKGKAEVETSDTGPMVTEADIRYIVSLWTGIPVEKVSHEESARLLK 1651
            EL+A+++AI  K KE  KAE ET + GPMVTE+DI++IVS WTGIPVEKVS +ES RLLK
Sbjct: 542  ELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 601

Query: 1652 MEETLHNRIIGQHEXXXXXXXXXXXXXXGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 1831
            MEETLH RIIGQ E              GLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 602  MEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 661

Query: 1832 YFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEK 2011
            YFGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 662  YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 721

Query: 2012 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDF 2191
            AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE        I F LD+
Sbjct: 722  AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDY 778

Query: 2192 VEEANKRDYDYETIAGLVHEELKKYFRPEFLNRLDEIIVFKQLTK 2326
                +++D  Y  I  LV EELK+YFRPEFLNRLDE+IVF+QLTK
Sbjct: 779  ----DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 819


>ref|XP_004975454.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Setaria
            italica]
          Length = 921

 Score = 1070 bits (2768), Expect = 0.0
 Identities = 555/737 (75%), Positives = 618/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 87   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 146

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 147  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 206

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 207  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 266

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 267  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIE 326

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 327  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAID 386

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 387  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 446

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTDEAL+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 447  ERYELHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 506

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+I+++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 507  LDKELRQITKQKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMIKAETESGEVGP 566

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 567  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 626

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 627  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 686

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 687  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 746

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 747  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 799

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 800  EFLNRLDEMIVFRQLTK 816


>gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]
          Length = 921

 Score = 1070 bits (2767), Expect = 0.0
 Identities = 554/737 (75%), Positives = 618/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKV+KS GI +K
Sbjct: 87   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVMKSMGINLK 146

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 147  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 206

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 207  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 266

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 267  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIE 326

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 327  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAID 386

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 387  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 446

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD+AL+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 447  ERYELHHKLRYTDDALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 506

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+I+++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ D GP
Sbjct: 507  LDKELRQITKQKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMIKAETESGDVGP 566

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 567  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 626

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 627  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 686

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 687  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 746

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 747  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 799

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 800  EFLNRLDEMIVFRQLTK 816


>ref|XP_004252280.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4B, chloroplastic-like [Solanum lycopersicum]
          Length = 923

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 556/739 (75%), Positives = 615/739 (83%)
 Frame = +2

Query: 110  FKVKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGIT 289
            F  KAMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI 
Sbjct: 86   FVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGIN 145

Query: 290  MKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKE 469
            +KDAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++E
Sbjct: 146  LKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLRE 205

Query: 470  GEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTIL 649
            GEGVA +VLE  G D SNIR Q++ +V E  E      G   +  KMPTL+EYGTNLT L
Sbjct: 206  GEGVAARVLENLGADPSNIRTQVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKL 265

Query: 650  AEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPET 829
            AE+GKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PET
Sbjct: 266  AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 325

Query: 830  IENKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXX 1009
            IE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ +IILFIDEVHTL         
Sbjct: 326  IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 385

Query: 1010 XXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRG 1189
                  LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QIL+G
Sbjct: 386  IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKG 445

Query: 1190 LRERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEA 1369
            LRERYE+HHKL YTDEALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LPEEA
Sbjct: 446  LRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 505

Query: 1370 KELGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDT 1549
            KEL  ELR+I++EKN+AVR +DF+KAG L D+ ++LKAQI A+ DK KE  KAE E +DT
Sbjct: 506  KELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADT 565

Query: 1550 GPMVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXX 1729
            GP+VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E            
Sbjct: 566  GPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRA 625

Query: 1730 XXGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLI 1909
              GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLI
Sbjct: 626  RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 685

Query: 1910 GSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 2089
            GSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 686  GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 745

Query: 2090 DFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYF 2269
            DFKNTLLIMTSNVGSSVIE        I F LD     +++D  Y  I  LV EELK+YF
Sbjct: 746  DFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDL----DEKDSSYNRIKSLVTEELKQYF 798

Query: 2270 RPEFLNRLDEIIVFKQLTK 2326
            RPEFLNRLDE+IVF+QLTK
Sbjct: 799  RPEFLNRLDEMIVFRQLTK 817


>ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
            gi|297311666|gb|EFH42090.1| heat shock protein 93-V
            [Arabidopsis lyrata subsp. lyrata]
          Length = 929

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 558/765 (72%), Positives = 629/765 (82%), Gaps = 8/765 (1%)
 Frame = +2

Query: 56   TIGTKSMPFRTKTRKQVG--------FKVKAMFDRFTEKAIKVIMLSQEESRRLGHNFVX 211
            T+G     F +K R+ +         F VKAMF+RFTEKAIKVIML+QEE+RRLGHNFV 
Sbjct: 63   TLGKNRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 122

Query: 212  XXXXXXXXXXXXXXXAAKVLKSSGITMKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLE 391
                           AAKVLKS GI +KDAR EVEKIIGRG+G V+VEIPFT RAK VLE
Sbjct: 123  TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 182

Query: 392  LALEEAKQLGHSYIGSEHLLLGLIKEGEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELA 571
            L+LEEA+QLGH+YIGSEHLLLGL++EGEGVA +VLE  G D SNIR Q++ +V E+ E+ 
Sbjct: 183  LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVT 242

Query: 572  YNKAGQNATSGKMPTLDEYGTNLTILAEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLI 751
             N  G  ++S KMPTL+EYGTNLT LAE+GKLDPVVGRQ QIERV QILGRRTKNNPCLI
Sbjct: 243  ANVGG-GSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 301

Query: 752  GEPGVGKTAIAEGLAQRIVSGTIPETIENKKVITLDMGMLVAGTKYRGEFEERIKKLMDE 931
            GEPGVGKTAIAEGLAQRI SG +PETIE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E
Sbjct: 302  GEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 361

Query: 932  VRQNPDIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKD 1111
            +RQ+ +IILFIDEVHTL               LKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 362  IRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 421

Query: 1112 PALERRFQPVQVPEPTVDEAVQILRGLRERYELHHKLNYTDEALVAAAELSSQYISDRFL 1291
            PALERRFQPV+VPEPTVDE +QIL+GLRERYE+HHKL YTD++LVAAA+LS QYISDRFL
Sbjct: 422  PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDSLVAAAQLSYQYISDRFL 481

Query: 1292 PDKAIDLIDEAGSRVRLKHAKLPEEAKELGVELRKISQEKNDAVRNKDFDKAGMLHDQYL 1471
            PDKAIDLIDEAGSRVRL+HA++PEEA+EL  ELR+I++EKN+AVR +DF+KAG L D+ +
Sbjct: 482  PDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREI 541

Query: 1472 ELKAQIAAITDKEKEKGKAEVETSDTGPMVTEADIRYIVSLWTGIPVEKVSHEESARLLK 1651
            EL+A+++AI  K KE  KAE ET + GPMVTE+DI++IVS WTGIPVEKVS +ES RLLK
Sbjct: 542  ELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 601

Query: 1652 MEETLHNRIIGQHEXXXXXXXXXXXXXXGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 1831
            MEETLH RIIGQ E              GLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 602  MEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 661

Query: 1832 YFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEK 2011
            YFGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 662  YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 721

Query: 2012 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDF 2191
            AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE        I F LD+
Sbjct: 722  AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDY 778

Query: 2192 VEEANKRDYDYETIAGLVHEELKKYFRPEFLNRLDEIIVFKQLTK 2326
                +++D  Y  I  LV EELK+YFRPEFLNRLDE+IVF+QLTK
Sbjct: 779  ----DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 819


>ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Brachypodium
            distachyon]
          Length = 879

 Score = 1069 bits (2765), Expect = 0.0
 Identities = 554/737 (75%), Positives = 617/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 45   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 104

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 105  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 164

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 165  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 224

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 225  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRITNGDVPETIE 284

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ DIILFIDEVHTL           
Sbjct: 285  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAID 344

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 345  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 404

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD+AL AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 405  ERYELHHKLRYTDDALTAAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 464

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELRK++++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 465  LDKELRKVTKDKNEAVRGQDFEKAGELRDKEMELKAQITAIIDKSKEMVKAETESGEVGP 524

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 525  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARV 584

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LASYYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 585  GLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGS 644

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 645  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 704

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 705  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 757

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 758  EFLNRLDEMIVFRQLTK 774


>ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Brachypodium
            distachyon]
          Length = 921

 Score = 1069 bits (2764), Expect = 0.0
 Identities = 553/737 (75%), Positives = 618/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 87   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 146

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 147  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 206

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 207  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 266

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 267  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRITNGDVPETIE 326

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ DIILFIDEVHTL           
Sbjct: 327  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAID 386

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 387  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 446

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD+AL+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 447  ERYELHHKLRYTDDALIAAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 506

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+++++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 507  LDKELRQVTKDKNEAVRGQDFEKAGELRDKEMELKAQITAIIDKSKEMVKAETESGEVGP 566

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 567  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARV 626

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LASYYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 627  GLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGS 686

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 687  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 746

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 747  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 799

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 800  EFLNRLDEMIVFRQLTK 816


>ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
            gi|241938907|gb|EES12052.1| hypothetical protein
            SORBIDRAFT_06g014590 [Sorghum bicolor]
          Length = 921

 Score = 1069 bits (2764), Expect = 0.0
 Identities = 553/737 (75%), Positives = 619/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 87   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 146

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 147  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 206

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 207  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 266

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGR++QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 267  EGKLDPVVGRRDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIE 326

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 327  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAID 386

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 387  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 446

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD+AL+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 447  ERYELHHKLRYTDDALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 506

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+I+++KN+AVR++DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 507  LDKELRQITKQKNEAVRSQDFEKAGELRDREMELKAQITAIIDKSKEMIKAETESGEVGP 566

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 567  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 626

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 627  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 686

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 687  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 746

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 747  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 799

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 800  EFLNRLDEMIVFRQLTK 816


>ref|XP_006652229.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Oryza
            brachyantha]
          Length = 888

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 552/737 (74%), Positives = 618/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 54   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 113

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 114  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 173

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 174  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 233

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 234  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIE 293

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 294  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAID 353

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 354  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 413

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD++L+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 414  ERYELHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 473

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+++++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 474  LDKELRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGP 533

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 534  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 593

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 594  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 653

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 654  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 713

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 714  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 766

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 767  EFLNRLDEMIVFRQLTK 783


>ref|XP_006485108.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4B, chloroplastic-like isoform X1 [Citrus
            sinensis] gi|568863338|ref|XP_006485109.1| PREDICTED:
            ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4B, chloroplastic-like isoform X2 [Citrus
            sinensis]
          Length = 923

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 555/761 (72%), Positives = 624/761 (81%)
 Frame = +2

Query: 44   FHDFTIGTKSMPFRTKTRKQVGFKVKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXX 223
            FH  T+       R K+ +  GF VKAMF+RFTEKAIKVIML+QEE+RRLGHNFV     
Sbjct: 65   FHS-TVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQI 123

Query: 224  XXXXXXXXXXXAAKVLKSSGITMKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALE 403
                       AAKVLKS GI +KDAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LE
Sbjct: 124  LLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLE 183

Query: 404  EAKQLGHSYIGSEHLLLGLIKEGEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKA 583
            EA+QLGH+YIGSEHLLLGL++EGEGVA +VLE  G D SNIR Q++ +V E  E      
Sbjct: 184  EARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGV 243

Query: 584  GQNATSGKMPTLDEYGTNLTILAEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPG 763
            G  ++  KMPTL+EYGTNLT LAE+GKLDPVVGRQ QIERV QILGRRTKNNPCLIGEPG
Sbjct: 244  GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 303

Query: 764  VGKTAIAEGLAQRIVSGTIPETIENKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQN 943
            VGKTAIAEGLAQRI SG +P+TIE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++Q+
Sbjct: 304  VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 363

Query: 944  PDIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALE 1123
             +IILFIDEVHTL               LKP+LARGELQCIGATTLDEYRKHIEKDPALE
Sbjct: 364  DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 423

Query: 1124 RRFQPVQVPEPTVDEAVQILRGLRERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKA 1303
            RRFQPV+VPEP+VDE +QIL+GLRERYE+HHKL YTDEALV+AA+LS QYISDRFLPDKA
Sbjct: 424  RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 483

Query: 1304 IDLIDEAGSRVRLKHAKLPEEAKELGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKA 1483
            IDLIDEAGSRVRL+HA+LPEEA+EL  ELR+I++EKN+AVR +DF+KAG L D+ ++LKA
Sbjct: 484  IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 543

Query: 1484 QIAAITDKEKEKGKAEVETSDTGPMVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEET 1663
            QI+A+ DK KE  KAE E  D GP+VTE DI++IVS WTGIPVEKVS +ES RLLKMEET
Sbjct: 544  QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 603

Query: 1664 LHNRIIGQHEXXXXXXXXXXXXXXGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGS 1843
            LH R+IGQ E              GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGS
Sbjct: 604  LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 663

Query: 1844 EEAMVRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPD 2023
            EEAM+RLDMSE+MERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPD
Sbjct: 664  EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 723

Query: 2024 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEA 2203
            VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE        I F LD+    
Sbjct: 724  VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDY---- 776

Query: 2204 NKRDYDYETIAGLVHEELKKYFRPEFLNRLDEIIVFKQLTK 2326
            +++D  Y  I  LV EELK+YFRPEFLNRLDE+IVF+QLTK
Sbjct: 777  DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 817


>emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]
          Length = 888

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 552/737 (74%), Positives = 618/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 54   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 113

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 114  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 173

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 174  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 233

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 234  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIE 293

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 294  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAID 353

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 354  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 413

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD++L+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 414  ERYELHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 473

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+++++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 474  LDKELRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGP 533

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 534  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 593

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 594  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 653

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 654  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 713

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 714  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 766

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 767  EFLNRLDEMIVFRQLTK 783


>sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpC
            homolog 1; AltName: Full=Casein lytic proteinase C1;
            Flags: Precursor
          Length = 918

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 552/737 (74%), Positives = 618/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 84   VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 143

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 144  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 203

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 204  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 263

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 264  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIE 323

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 324  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAID 383

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 384  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 443

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD++L+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 444  ERYELHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 503

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+++++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 504  LDKELRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGP 563

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 564  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 623

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 624  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 683

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 684  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 743

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 744  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 796

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 797  EFLNRLDEMIVFRQLTK 813


>gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japonica Group]
          Length = 1033

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 552/737 (74%), Positives = 618/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 199  VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 258

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 259  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 318

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G  ++  KMPTL+EYGTNLT LAE
Sbjct: 319  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAE 378

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 379  EGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIE 438

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 439  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAID 498

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QILRGLR
Sbjct: 499  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLR 558

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTD++L+AAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 559  ERYELHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 618

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+++++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 619  LDKELRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGP 678

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 679  LVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 738

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLIGS
Sbjct: 739  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 798

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 799  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 858

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 859  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDTSYNRIKSLVTEELKQYFRP 911

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 912  EFLNRLDEMIVFRQLTK 928


>ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
            gi|300167545|gb|EFJ34150.1| hypothetical protein
            SELMODRAFT_439163 [Selaginella moellendorffii]
          Length = 937

 Score = 1068 bits (2761), Expect = 0.0
 Identities = 552/737 (74%), Positives = 616/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS G+ +K
Sbjct: 100  VVAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLK 159

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            +AR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 160  EARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 219

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D  NIR Q++ +V E  E      G  ++S KMPTL+EYGTNLT LAE
Sbjct: 220  GVAARVLENLGADPGNIRTQVIRMVGESTEAVGASVGGGSSSNKMPTLEEYGTNLTKLAE 279

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 280  EGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIE 339

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKV+TLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ DIIL IDEVHTL           
Sbjct: 340  GKKVVTLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILVIDEVHTLIGAGAAEGAID 399

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPV VPEPTVDE +QIL+GLR
Sbjct: 400  AANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVNVPEPTVDETIQILKGLR 459

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYE+HHKL YTDEALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LPEEA++
Sbjct: 460  ERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARD 519

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+I++EKN+AVR +DF+KAG L D+ +ELKAQI+AIT+K KEK KAE E  +TGP
Sbjct: 520  LDKELRQITKEKNEAVRGQDFEKAGELRDREMELKAQISAITEKGKEKSKAETEAGETGP 579

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI+ IVS WTGIPVEKVS +ES RL+KMEETLH R+IGQ E              
Sbjct: 580  LVTEADIQQIVSAWTGIPVEKVSTDESDRLMKMEETLHQRVIGQDEAVKAISRAIRRARV 639

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMVRLDMSE+MERHTVSKLIGS
Sbjct: 640  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMVRLDMSEFMERHTVSKLIGS 699

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 700  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 759

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE        I F LD+ E    +D  Y  I  LV+EELK+YFRP
Sbjct: 760  KNTLLIMTSNVGSSVIEKGGGG---IGFQLDYGE----KDSSYNRIKTLVNEELKQYFRP 812

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDEIIVF+QLTK
Sbjct: 813  EFLNRLDEIIVFRQLTK 829


>ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
            gi|300155137|gb|EFJ21770.1| hypothetical protein
            SELMODRAFT_176012 [Selaginella moellendorffii]
          Length = 901

 Score = 1068 bits (2761), Expect = 0.0
 Identities = 552/737 (74%), Positives = 616/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V AMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS G+ +K
Sbjct: 64   VVAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLK 123

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            +AR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 124  EARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 183

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D  NIR Q++ +V E  E      G  ++S KMPTL+EYGTNLT LAE
Sbjct: 184  GVAARVLENLGADPGNIRTQVIRMVGESTEAVGASVGGGSSSNKMPTLEEYGTNLTKLAE 243

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ+QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 244  EGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIE 303

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKV+TLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ DIIL IDEVHTL           
Sbjct: 304  GKKVVTLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILVIDEVHTLIGAGAAEGAID 363

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPV VPEPTVDE +QIL+GLR
Sbjct: 364  AANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVNVPEPTVDETIQILKGLR 423

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYE+HHKL YTDEALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LPEEA++
Sbjct: 424  ERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARD 483

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+I++EKN+AVR +DF+KAG L D+ +ELKAQI+AIT+K KEK KAE E  +TGP
Sbjct: 484  LDKELRQITKEKNEAVRGQDFEKAGELRDREMELKAQISAITEKGKEKSKAETEAGETGP 543

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI+ IVS WTGIPVEKVS +ES RL+KMEETLH R+IGQ E              
Sbjct: 544  LVTEADIQQIVSAWTGIPVEKVSTDESDRLMKMEETLHQRVIGQDEAVKAISRAIRRARV 603

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAMVRLDMSE+MERHTVSKLIGS
Sbjct: 604  GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMVRLDMSEFMERHTVSKLIGS 663

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 664  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 723

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE        I F LD+ E    +D  Y  I  LV+EELK+YFRP
Sbjct: 724  KNTLLIMTSNVGSSVIEKGGGG---IGFQLDYGE----KDSSYNRIKTLVNEELKQYFRP 776

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDEIIVF+QLTK
Sbjct: 777  EFLNRLDEIIVFRQLTK 793


>ref|XP_004975455.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like [Setaria
            italica]
          Length = 918

 Score = 1067 bits (2760), Expect = 0.0
 Identities = 554/737 (75%), Positives = 616/737 (83%)
 Frame = +2

Query: 116  VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGITMK 295
            V+AMF+RFTEKAIKV+ML+QEE+RRLGHNFV                AAKVLKS GI +K
Sbjct: 84   VRAMFERFTEKAIKVVMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 143

Query: 296  DARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKEGE 475
            DAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++EGE
Sbjct: 144  DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGE 203

Query: 476  GVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTILAE 655
            GVA +VLE  G D +NIR Q++ +V E  E      G   +  KMPTL+EYGTNLT LAE
Sbjct: 204  GVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGTSGQKMPTLEEYGTNLTKLAE 263

Query: 656  QGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPETIE 835
            +GKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PETIE
Sbjct: 264  EGKLDPVVGRQNQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIE 323

Query: 836  NKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXXXX 1015
             KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++QN DIILFIDEVHTL           
Sbjct: 324  GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAID 383

Query: 1016 XXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRGLR 1195
                LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE  QILRGLR
Sbjct: 384  AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETTQILRGLR 443

Query: 1196 ERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEAKE 1375
            ERYELHHKL YTDEALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LP+EAKE
Sbjct: 444  ERYELHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKE 503

Query: 1376 LGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDTGP 1555
            L  ELR+I+++KN+AVR +DF+KAG L D+ +ELKAQI AI DK KE  KAE E+ + GP
Sbjct: 504  LDKELRQITKQKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMIKAETESGEVGP 563

Query: 1556 MVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXXXX 1735
            +VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E              
Sbjct: 564  LVTEADIQHIVSSWTGIPVEKVSADESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARV 623

Query: 1736 GLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLIGS 1915
            GLKNPNRPIASFIFSGPTGVGKSELAK+LA+YYFGSEEAM+RLDMSE+MERHTV+KLIGS
Sbjct: 624  GLKNPNRPIASFIFSGPTGVGKSELAKSLAAYYFGSEEAMIRLDMSEFMERHTVAKLIGS 683

Query: 1916 PPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 2095
            PPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF
Sbjct: 684  PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 743

Query: 2096 KNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYFRP 2275
            KNTLLIMTSNVGSSVIE       +I F LD+    +++D  Y  I  LV EELK+YFRP
Sbjct: 744  KNTLLIMTSNVGSSVIEKGGR---KIGFDLDY----DEKDSSYTRIKSLVTEELKQYFRP 796

Query: 2276 EFLNRLDEIIVFKQLTK 2326
            EFLNRLDE+IVF+QLTK
Sbjct: 797  EFLNRLDEMIVFRQLTK 813


>sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4B, chloroplastic; Flags: Precursor
            gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
            [Solanum lycopersicum]
          Length = 923

 Score = 1067 bits (2760), Expect = 0.0
 Identities = 555/739 (75%), Positives = 614/739 (83%)
 Frame = +2

Query: 110  FKVKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSSGIT 289
            F  KAMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAKVLKS GI 
Sbjct: 86   FVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGIN 145

Query: 290  MKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEHLLLGLIKE 469
            +KDAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEHLLLGL++E
Sbjct: 146  LKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLRE 205

Query: 470  GEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDEYGTNLTIL 649
            GEGVA +VLE  G D SNIR Q++ +V E  E      G   +  KMPTL+EYGTNLT L
Sbjct: 206  GEGVAARVLENLGADPSNIRTQVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKL 265

Query: 650  AEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIVSGTIPET 829
            AE+GKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +G +PET
Sbjct: 266  AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 325

Query: 830  IENKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLXXXXXXXXX 1009
            IE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ +IILFIDEVHTL         
Sbjct: 326  IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 385

Query: 1010 XXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVDEAVQILRG 1189
                  LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVDE +QIL+G
Sbjct: 386  IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKG 445

Query: 1190 LRERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLKHAKLPEEA 1369
            LRERYE+HHKL YTDE LVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRL+HA+LPEEA
Sbjct: 446  LRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 505

Query: 1370 KELGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGKAEVETSDT 1549
            KEL  ELR+I++EKN+AVR +DF+KAG L D+ ++LKAQI A+ DK KE  KAE E +DT
Sbjct: 506  KELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADT 565

Query: 1550 GPMVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXXXXXXXXXX 1729
            GP+VTEADI++IVS WTGIPVEKVS +ES RLLKMEETLH RIIGQ E            
Sbjct: 566  GPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRA 625

Query: 1730 XXGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYMERHTVSKLI 1909
              GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSE+MERHTVSKLI
Sbjct: 626  RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 685

Query: 1910 GSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 2089
            GSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 686  GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 745

Query: 2090 DFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLVHEELKKYF 2269
            DFKNTLLIMTSNVGSSVIE        I F LD     +++D  Y  I  LV EELK+YF
Sbjct: 746  DFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDL----DEKDSSYNRIKSLVTEELKQYF 798

Query: 2270 RPEFLNRLDEIIVFKQLTK 2326
            RPEFLNRLDE+IVF+QLTK
Sbjct: 799  RPEFLNRLDEMIVFRQLTK 817


>ref|XP_006402040.1| hypothetical protein EUTSA_v10012603mg [Eutrema salsugineum]
            gi|557103130|gb|ESQ43493.1| hypothetical protein
            EUTSA_v10012603mg [Eutrema salsugineum]
          Length = 929

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 556/766 (72%), Positives = 628/766 (81%), Gaps = 8/766 (1%)
 Frame = +2

Query: 56   TIGTKSMPFRTKTRKQVGFK--------VKAMFDRFTEKAIKVIMLSQEESRRLGHNFVX 211
            T+G     F ++ R+ +            KAMF+RFTEKAIKVIML+QEE+RRLGHNFV 
Sbjct: 63   TLGRSRQDFHSRVRQAMNVPKGKASRCVTKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 122

Query: 212  XXXXXXXXXXXXXXXAAKVLKSSGITMKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLE 391
                           AAKVLKS GI +KDAR EVEKIIGRG+G V+VEIPFT RAK VLE
Sbjct: 123  TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 182

Query: 392  LALEEAKQLGHSYIGSEHLLLGLIKEGEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELA 571
            L+LEEA+QLGH+YIGSEHLLLGL++EGEGVA +VLE  G D SNIR Q++ +V E+ E+ 
Sbjct: 183  LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVT 242

Query: 572  YNKAGQNATSGKMPTLDEYGTNLTILAEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLI 751
             N  G  ++S KMPTL+EYGTNLT LAE+GKLDPVVGRQ QIERV QILGRRTKNNPCLI
Sbjct: 243  ANVGG-GSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI 301

Query: 752  GEPGVGKTAIAEGLAQRIVSGTIPETIENKKVITLDMGMLVAGTKYRGEFEERIKKLMDE 931
            GEPGVGKTAIAEGLAQRI SG +PETIE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E
Sbjct: 302  GEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 361

Query: 932  VRQNPDIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKD 1111
            +RQ+ +IILFIDEVHTL               LKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 362  IRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 421

Query: 1112 PALERRFQPVQVPEPTVDEAVQILRGLRERYELHHKLNYTDEALVAAAELSSQYISDRFL 1291
            PALERRFQPV+VPEPTVDE +QIL+GLRERYE+HHKL YTD++LVAAA+LS QYISDRFL
Sbjct: 422  PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDSLVAAAQLSYQYISDRFL 481

Query: 1292 PDKAIDLIDEAGSRVRLKHAKLPEEAKELGVELRKISQEKNDAVRNKDFDKAGMLHDQYL 1471
            PDKAIDLIDEAGSRVRL+HA++PEEA+EL  ELR+I++EKN+AVR +DF+KAG L D+ +
Sbjct: 482  PDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREI 541

Query: 1472 ELKAQIAAITDKEKEKGKAEVETSDTGPMVTEADIRYIVSLWTGIPVEKVSHEESARLLK 1651
            EL+A+++AI  K KE  KAE ET + GPMVTE+DI++IVS WTGIPVEKVS +ES RLLK
Sbjct: 542  ELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLK 601

Query: 1652 MEETLHNRIIGQHEXXXXXXXXXXXXXXGLKNPNRPIASFIFSGPTGVGKSELAKTLASY 1831
            MEETLH RIIGQ E              GLKNPNRPIASFIFSGPTGVGKSELAK LA+Y
Sbjct: 602  MEETLHKRIIGQDEAVVAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY 661

Query: 1832 YFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEK 2011
            YFGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEK
Sbjct: 662  YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK 721

Query: 2012 AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDF 2191
            AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE        I F LD+
Sbjct: 722  AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDY 778

Query: 2192 VEEANKRDYDYETIAGLVHEELKKYFRPEFLNRLDEIIVFKQLTKP 2329
                +++D  Y  I  LV EELK+YFRPEFLNRLDE+IVF+QLTKP
Sbjct: 779  ----DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKP 820


>ref|XP_004297496.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Fragaria vesca
            subsp. vesca]
          Length = 922

 Score = 1064 bits (2751), Expect = 0.0
 Identities = 551/747 (73%), Positives = 618/747 (82%)
 Frame = +2

Query: 86   TKTRKQVGFKVKAMFDRFTEKAIKVIMLSQEESRRLGHNFVXXXXXXXXXXXXXXXXAAK 265
            ++ RK      KAMF+RFTEKAIKVIML+QEE+RRLGHNFV                AAK
Sbjct: 78   SRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAK 137

Query: 266  VLKSSGITMKDARAEVEKIIGRGNGNVSVEIPFTLRAKHVLELALEEAKQLGHSYIGSEH 445
            VLKS GI +KDAR EVEKIIGRG+G V+VEIPFT RAK VLEL+LEEA+QLGH+YIGSEH
Sbjct: 138  VLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEH 197

Query: 446  LLLGLIKEGEGVAVKVLEQFGVDLSNIRAQILHLVSEDGELAYNKAGQNATSGKMPTLDE 625
            LLLGL++EGEGVA +VLE  G D SNIR Q++ +V E  E     AGQ  +  KMPTL+E
Sbjct: 198  LLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGVGAGQGTSGNKMPTLEE 257

Query: 626  YGTNLTILAEQGKLDPVVGRQEQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 805
            YGTNLT LAE+GKLDPVVGRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI
Sbjct: 258  YGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 317

Query: 806  VSGTIPETIENKKVITLDMGMLVAGTKYRGEFEERIKKLMDEVRQNPDIILFIDEVHTLX 985
             SG +PETIE KKVITLDMG+LVAGTKYRGEFEER+KKLM+E++Q+ +IILFIDEVHTL 
Sbjct: 318  ASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLI 377

Query: 986  XXXXXXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVQVPEPTVD 1165
                          LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEPTVD
Sbjct: 378  GAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVD 437

Query: 1166 EAVQILRGLRERYELHHKLNYTDEALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLK 1345
            E +QILRGLRERYE+HHKL YTDEAL++AA+LS QYISDRFLPDKAIDLIDEAGSRVRL+
Sbjct: 438  ETIQILRGLRERYEIHHKLRYTDEALISAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLR 497

Query: 1346 HAKLPEEAKELGVELRKISQEKNDAVRNKDFDKAGMLHDQYLELKAQIAAITDKEKEKGK 1525
            HA+LPEEA+EL  ELR+I++EKN+AVR++DF+KAG L D+ ++LK QI AIT+K KE  K
Sbjct: 498  HAQLPEEARELDKELRQITKEKNEAVRSQDFEKAGELRDREMDLKTQITAITEKGKEMSK 557

Query: 1526 AEVETSDTGPMVTEADIRYIVSLWTGIPVEKVSHEESARLLKMEETLHNRIIGQHEXXXX 1705
            AE E  D GP+VTE DI++IV+ WTGIPV+KVS +ES RLLKMEETLH R+IGQ E    
Sbjct: 558  AESEAGDVGPLVTEVDIQHIVASWTGIPVDKVSADESDRLLKMEETLHTRVIGQDEAVKA 617

Query: 1706 XXXXXXXXXXGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEYME 1885
                      GLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGS+EAM+RLDMSE+ME
Sbjct: 618  ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSQEAMIRLDMSEFME 677

Query: 1886 RHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 2065
            RHTVSKLIGSPPGYVGY+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL
Sbjct: 678  RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 737

Query: 2066 TDSKGRTVDFKNTLLIMTSNVGSSVIEXXXXXXPEIRFHLDFVEEANKRDYDYETIAGLV 2245
            TDSKGRTVDFKNTLLIMTSNVGSSVIE        I F LD+    +++D  Y  I  LV
Sbjct: 738  TDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDY----DEKDSSYNRIKSLV 790

Query: 2246 HEELKKYFRPEFLNRLDEIIVFKQLTK 2326
             EELK+YFRPEFLNRLDE+IVF+QLTK
Sbjct: 791  TEELKQYFRPEFLNRLDEMIVFRQLTK 817