BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00008983
         (607 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A...   282   6e-74
gb|ABR18148.1| unknown [Picea sitchensis]                             272   5e-71
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   270   2e-70
gb|ABK23892.1| unknown [Picea sitchensis]                             268   1e-69
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   268   1e-69
gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family pro...   266   4e-69
ref|XP_002979667.1| hypothetical protein SELMODRAFT_228648 [Sela...   261   1e-67
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun...   260   2e-67
ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|5...   257   2e-66
gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus pe...   256   3e-66
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...   256   3e-66
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I...   256   4e-66
gb|AFK41303.1| unknown [Medicago truncatula]                          256   4e-66
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I...   253   4e-65
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I...   250   2e-64
ref|XP_001758465.1| predicted protein [Physcomitrella patens] gi...   250   2e-64
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a...   249   3e-64
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a...   249   4e-64
emb|CBI28035.3| unnamed protein product [Vitis vinifera]              249   5e-64
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   248   1e-63

>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
           gi|548863022|gb|ERN20377.1| hypothetical protein
           AMTR_s00068p00034280 [Amborella trichopoda]
          Length = 206

 Score =  282 bits (721), Expect = 6e-74
 Identities = 132/177 (74%), Positives = 159/177 (89%)
 Frame = -3

Query: 533 MDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDK 354
           MDD  +++FRIRRT++QML+DRGYLVGDFEIN+TK  FI KFG++ +KDDL INK MR+ 
Sbjct: 4   MDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNN 63

Query: 353 PSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHL 174
           PS+QI+VFFPE+ KVGVKT+KTY ERMK+E+VFRAILV+QQ+LTPFAR  +QE   KFHL
Sbjct: 64  PSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHL 123

Query: 173 EVFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           E+FQESELLVNIKEH+LVPEHQVLT+EEKK+LLERYTLKETQLPR+Q +DP+ RYYG
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYG 180


>gb|ABR18148.1| unknown [Picea sitchensis]
          Length = 194

 Score =  272 bits (696), Expect = 5e-71
 Identities = 135/179 (75%), Positives = 153/179 (85%)
 Frame = -3

Query: 539 LSMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMR 360
           +++D+  N++FRIRRTVLQML DR YLVGDFEIN TKE F+ KFGEDP+K+DL INKA R
Sbjct: 1   MALDEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKR 60

Query: 359 DKPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKF 180
           + PS+QIFVFFPE+AKVGVK+IKTYVERMK+E VFRAILVVQ           QEF GKF
Sbjct: 61  NSPSEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQ-----------QEFSGKF 109

Query: 179 HLEVFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           HLEVFQE+ELLVNIKEH+LVPE Q+LT EEKK+LLERYTLKETQLPRMQESDPV RYYG
Sbjct: 110 HLEVFQEAELLVNIKEHVLVPEQQILTPEEKKTLLERYTLKETQLPRMQESDPVARYYG 168


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  270 bits (691), Expect = 2e-70
 Identities = 127/176 (72%), Positives = 156/176 (88%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           D+   R+FRIRRTV+QML+DRGY VGDFEIN++KE FI+KFGE+ +++DL INKA+R+  
Sbjct: 5   DEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRNDS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFP++ KVGVKT+KTY  RMK+E+VFRAILVVQQ+LTPFAR  +QE   KFHLE
Sbjct: 65  SDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIKEH+LVPEHQVLT EEKK+LL+RYT+KETQLPR+Q +DP+ RYYG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYG 180


>gb|ABK23892.1| unknown [Picea sitchensis]
          Length = 191

 Score =  268 bits (684), Expect = 1e-69
 Identities = 129/165 (78%), Positives = 150/165 (90%)
 Frame = -3

Query: 539 LSMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMR 360
           +++D+  N++FRIRRTVLQML DR YLVGDFEIN TKE F+ KFGEDP+K+DL INKA R
Sbjct: 1   MALDEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKR 60

Query: 359 DKPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKF 180
           + PS+QIFVFFPE+AKVGVK+IKTYVERMK+E VFRAILVVQQ+LTPFAR S+QEF GKF
Sbjct: 61  NSPSEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFSGKF 120

Query: 179 HLEVFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQL 45
           HLEVFQE+ELLVNIKEH+LVPE Q+LT EEKK+LLERYTLKETQ+
Sbjct: 121 HLEVFQEAELLVNIKEHVLVPEQQILTPEEKKTLLERYTLKETQV 165


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  268 bits (684), Expect = 1e-69
 Identities = 127/176 (72%), Positives = 154/176 (87%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++  +R+FRIR+TV+QMLKDRGY VGDFEIN+TK  F+SKFGE+ +++DL INKA R   
Sbjct: 5   EEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+ KVGVKT+KTY  RMK+E+VFRAILVVQQ+LTPFAR  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIKEH+LVPEHQVLT+EEKK+LLERYT+KETQLPR+Q SDP+ RY+G
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 180


>gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  266 bits (679), Expect = 4e-69
 Identities = 126/176 (71%), Positives = 151/176 (85%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           DD   R+FRIR+TV+QMLKDRGY VGDFEI +TK  FISK+GE+ +++DL INK  R+  
Sbjct: 5   DDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRNDN 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFP++AKVGVKT+KTY  RMK+E+VFRA+LVVQQ+LTPFAR  + E   KFHLE
Sbjct: 65  SDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQESELLVN+KEH LVPEHQVLT EEKK+LL+RYT+KETQLPR+Q SDP+ RYYG
Sbjct: 125 VFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYG 180


>ref|XP_002979667.1| hypothetical protein SELMODRAFT_228648 [Selaginella moellendorffii]
           gi|302807361|ref|XP_002985375.1| hypothetical protein
           SELMODRAFT_181697 [Selaginella moellendorffii]
           gi|300146838|gb|EFJ13505.1| hypothetical protein
           SELMODRAFT_181697 [Selaginella moellendorffii]
           gi|300152427|gb|EFJ19069.1| hypothetical protein
           SELMODRAFT_228648 [Selaginella moellendorffii]
          Length = 206

 Score =  261 bits (666), Expect = 1e-67
 Identities = 124/177 (70%), Positives = 151/177 (85%)
 Frame = -3

Query: 533 MDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDK 354
           +DD+ NR++RIRRT++QML+DR YLV D+E++LTKE F  KFG++P++DDL I+KA R  
Sbjct: 4   LDDSTNRLYRIRRTIMQMLRDRDYLVADYEVSLTKEQFRDKFGDEPKRDDLVISKAKRSD 63

Query: 353 PSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHL 174
            SDQIFVFFPE+ KVGVKTIKTY ERMK+E VFRAI+VVQ SLTPFA+  L E   K+ +
Sbjct: 64  QSDQIFVFFPEEPKVGVKTIKTYAERMKSELVFRAIMVVQTSLTPFAKQCLSEMAPKYQI 123

Query: 173 EVFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           EVFQE+ELLVNIKEH LVPEHQVL+ EEKK+LLERYT+KE+QLPRMQ+ DPV RYYG
Sbjct: 124 EVFQEAELLVNIKEHTLVPEHQVLSAEEKKTLLERYTVKESQLPRMQDRDPVARYYG 180


>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  260 bits (665), Expect = 2e-67
 Identities = 122/176 (69%), Positives = 152/176 (86%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           +D   R+FRIRRTV+QML+DR YLVGDFE+N+TKE F +K+GE+ +++DL INK+ R+  
Sbjct: 5   EDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
            DQI+VFFPE+ KVGVKT+KTY+ RMK+E+V RA+LVVQQ+LTPFAR  + E   KFHLE
Sbjct: 65  PDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIKEH+LVPEHQVLT EEKK+LLERYT+KETQLPR+Q +DP+ RYYG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYG 180


>ref|XP_002331171.1| predicted protein [Populus trichocarpa]
           gi|566176743|ref|XP_006381734.1| DNA-directed RNA
           polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  257 bits (657), Expect = 2e-66
 Identities = 122/176 (69%), Positives = 150/176 (85%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++   R+ RIR+TV+QMLKDRGY VGDFEI +T+E F SK+G + +++DL INK  R+  
Sbjct: 5   EEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+AKVGVKT+KTY  RMK+E+VFRAILVVQQ+LTPFAR  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIKEH+LVPEHQVL+ EEKK+LLERYT+KETQLPR+Q +DP+ RYYG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180


>gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  256 bits (655), Expect = 3e-66
 Identities = 119/176 (67%), Positives = 150/176 (85%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++   R++R+R+TV+QMLKDR YLVGDFEIN+T+E F SK+GE+ +++DLTINK  R   
Sbjct: 5   EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+ KVGVKT+KTY  RMK+E+V RA+LV QQ+LTPFA+  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIKEH+LVPEH VLTTEEKK+LLERYT+KETQLPR+Q +DP+ +YYG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYG 180


>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|355511987|gb|AES93610.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 [Medicago truncatula]
          Length = 410

 Score =  256 bits (655), Expect = 3e-66
 Identities = 120/185 (64%), Positives = 153/185 (82%)
 Frame = -3

Query: 557 TSSVRILSMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLT 378
           T+   ++  ++   R++RIR+TV+QMLKDR YLVGDFE+N++K DF  K+GE+ +++DL 
Sbjct: 200 TTKKTMVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLV 259

Query: 377 INKAMRDKPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQ 198
           INK  +DKPSDQI+VFFPE+AKVGVKT+KTY  RM +E+V+RAILV Q SLTPFA+  + 
Sbjct: 260 INKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVS 319

Query: 197 EFQGKFHLEVFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPV 18
           E   KFHLEVFQE+ELLVNIKEH+LVPEHQ+L   EKK+LLERYT+KETQLPR+Q +DPV
Sbjct: 320 EIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPV 379

Query: 17  GRYYG 3
            RYYG
Sbjct: 380 ARYYG 384


>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score =  256 bits (653), Expect = 4e-66
 Identities = 119/176 (67%), Positives = 150/176 (85%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++   R++RIR+TV++ML+DR YLVGDFEIN++K  F  K+GE+ +++DL INK  +DKP
Sbjct: 5   EEEITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKP 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+ KVGVKT+KTY+ RM +E+V+RAILV Q SLTPFAR S+ E   KFHLE
Sbjct: 65  SDQIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSVAEISSKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIK+H+LVPEHQVLT  EKK+LLERYT+KETQLPR+Q +DPV RYYG
Sbjct: 125 VFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 180


>gb|AFK41303.1| unknown [Medicago truncatula]
          Length = 206

 Score =  256 bits (653), Expect = 4e-66
 Identities = 119/176 (67%), Positives = 149/176 (84%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++   R++RIR+TV+QMLKDR YLVGDFE+N++K DF  K+GE+ +++DL INK  +DKP
Sbjct: 5   EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDKP 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+AKVGVKT+KTY  RM +E+V+RAILV Q SLTPFA+  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIKEH+LVPEHQ+L   EKK+LLERYT+KETQLPR+Q +DPV RYYG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 180


>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score =  253 bits (645), Expect = 4e-65
 Identities = 118/176 (67%), Positives = 148/176 (84%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++   R++RIR+TV+ ML+DR YLVGDFE+N++K +F  K+GE+ +++DL INK  +DKP
Sbjct: 5   EEEITRLYRIRKTVMVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKTKKDKP 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+ KVGVKT+KTY  RM +E+V+RAILV Q SLTPFAR  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCIAEVSSKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+ELLVNIKEH+LVPEHQVLT  EKK+LLERYT+KETQLPR+Q +DPV RYYG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTETEKKTLLERYTVKETQLPRIQVTDPVARYYG 180


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Solanum lycopersicum]
           gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           isoform 2 [Solanum lycopersicum]
          Length = 206

 Score =  250 bits (639), Expect = 2e-64
 Identities = 113/176 (64%), Positives = 150/176 (85%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++  +++FR+R+T+++ML DRGYLVGDFEIN++K  F+ K+GE+ +++DL I KA R+  
Sbjct: 5   EEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNNS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+ KVGVKT+KTY ERMK E VF+AIL+VQQ+LTPFAR  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+E+LVNIK H+L+PEHQ+L+ EEKK+LLERYT+KETQLPR+Q +DP+ RYYG
Sbjct: 125 VFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180


>ref|XP_001758465.1| predicted protein [Physcomitrella patens]
           gi|162690500|gb|EDQ76867.1| predicted protein
           [Physcomitrella patens]
          Length = 208

 Score =  250 bits (639), Expect = 2e-64
 Identities = 117/178 (65%), Positives = 151/178 (84%)
 Frame = -3

Query: 536 SMDDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRD 357
           S+D+ + R++RIR+TV++ML+DR Y+V D+E+ L+KE F  K+G++P+++DL I K  R 
Sbjct: 5   SLDEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRS 64

Query: 356 KPSDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFH 177
             ++ IFVFFPE+AKVGVKTIKTYV+RMK E+V RAILVVQQ+LTPFAR  + E   K+H
Sbjct: 65  NNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMASKYH 124

Query: 176 LEVFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           LEVFQE+ELLVNIKEH+LVP H+VLT +EKK+LLERYT+KETQLPRMQE+DPV RYYG
Sbjct: 125 LEVFQEAELLVNIKEHVLVPLHEVLTPDEKKTLLERYTVKETQLPRMQENDPVARYYG 182


>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  249 bits (637), Expect = 3e-64
 Identities = 113/176 (64%), Positives = 150/176 (85%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++  +R+FR+R+T+++ML DRGYLVGDFEIN++K +F+ K+GE+ +++DL + KA R+  
Sbjct: 5   EEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRNNS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+ KVGVKT+KTY ERMK E VF+AIL+VQQ+LTPFAR  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+E+LVNIK H+L+P+HQ LT EEKK+LLERYT+KETQLPR+Q +DP+ RYYG
Sbjct: 125 VFQEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180


>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  249 bits (636), Expect = 4e-64
 Identities = 113/176 (64%), Positives = 149/176 (84%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++  +R+FR+R+T+++ML DRGYLVGDFEIN++K  F+ K+GE+ +++DL + KA R+  
Sbjct: 5   EEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAKRNNS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLE 171
           SDQI+VFFPE+ KVGVKT+KTY ERMK E VF+AIL+VQQ+LTPFAR  + E   KFHLE
Sbjct: 65  SDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLE 124

Query: 170 VFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VFQE+E+LVNIK H+L+PEH +L+ EEKKSLLERYT+KETQLPR+Q +DP+ RYYG
Sbjct: 125 VFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYG 180


>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  249 bits (635), Expect = 5e-64
 Identities = 119/160 (74%), Positives = 140/160 (87%)
 Frame = -3

Query: 482 MLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKPSDQIFVFFPEDAKVGV 303
           MLKDRGY VGDFEIN+TK  F+SKFGE+ +++DL INKA R   SDQI+VFFPE+ KVGV
Sbjct: 1   MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGV 60

Query: 302 KTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGKFHLEVFQESELLVNIKEHIL 123
           KT+KTY  RMK+E+VFRAILVVQQ+LTPFAR  + E   KFHLEVFQE+ELLVNIKEH+L
Sbjct: 61  KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVL 120

Query: 122 VPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           VPEHQVLT+EEKK+LLERYT+KETQLPR+Q SDP+ RY+G
Sbjct: 121 VPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 160


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  248 bits (632), Expect = 1e-63
 Identities = 118/177 (66%), Positives = 150/177 (84%), Gaps = 1/177 (0%)
 Frame = -3

Query: 530 DDNANRMFRIRRTVLQMLKDRGYLVGDFEINLTKEDFISKFGEDPRKDDLTINKAMRDKP 351
           ++   R+FRIR+TV QML+DRGY VGDFEI++T+E F  K+GE+ +++D+ INK+ R+  
Sbjct: 5   EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDS 64

Query: 350 SDQIFVFFPEDAKVGVKTIKTYVERMKNESVFRAILVVQQSLTPFARNSLQEFQGK-FHL 174
           SDQI+VFFPE+AKVG+K +KTY  RMK+E+VFRAILVVQQ+LTPFAR  + E   K FHL
Sbjct: 65  SDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSKSFHL 124

Query: 173 EVFQESELLVNIKEHILVPEHQVLTTEEKKSLLERYTLKETQLPRMQESDPVGRYYG 3
           EVFQE+ELLVNIK+H+LVPEHQ+L  EEKK+LLERYT+KETQLPR+Q +DPV RYYG
Sbjct: 125 EVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYG 181