BLASTX nr result
ID: Ephedra27_contig00008809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00008809
(469 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS58879.1| nucleoporin 98, partial [Genlisea aurea] 61 2e-07
gb|ABA95895.1| hypothetical protein LOC_Os12g06880 [Oryza sativa... 60 2e-07
ref|XP_003539631.1| PREDICTED: nuclear pore complex protein Nup9... 60 4e-07
ref|XP_002317654.1| nucleoporin family protein [Populus trichoca... 59 7e-07
ref|XP_006664369.1| PREDICTED: uncharacterized protein DDB_G0274... 59 9e-07
ref|XP_006432656.1| hypothetical protein CICLE_v10000333mg [Citr... 58 1e-06
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ... 58 1e-06
gb|EAY82387.1| hypothetical protein OsI_37600 [Oryza sativa Indi... 57 3e-06
gb|EEE52825.1| hypothetical protein OsJ_35341 [Oryza sativa Japo... 57 3e-06
ref|XP_004495523.1| PREDICTED: nuclear pore complex protein Nup9... 56 4e-06
gb|EEC68918.1| hypothetical protein OsI_37599 [Oryza sativa Indi... 56 4e-06
ref|XP_006594707.1| PREDICTED: nuclear pore complex protein Nup9... 55 7e-06
ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup9... 55 7e-06
ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup9... 55 7e-06
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9... 55 7e-06
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9... 55 1e-05
>gb|EPS58879.1| nucleoporin 98, partial [Genlisea aurea]
Length = 595
Score = 60.8 bits (146), Expect = 2e-07
Identities = 46/123 (37%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +3
Query: 105 FGQPIFSPFGAQQPAFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXAP-Q 281
FGQ SPFG+Q PAF Q NNAS N F P GSTSP AP
Sbjct: 1 FGQSTSSPFGSQ-PAFGQANNASSNPFAPKPFGSTSPFGSQTGGSIFGGMSTGAFGAPTS 59
Query: 282 TPL-ATSAFGAYSTPAFGTATFGSTTSAVGEXXXXXXXXXXXXXXXXXXXXERSAFRGFG 458
+PL + S FGA S+PA FGS T A G +++ F GFG
Sbjct: 60 SPLGSNSVFGASSSPA-----FGSPTPAFGASSGSAFGNSSSSFGGSSVFGQKATFGGFG 114
Query: 459 TPN 467
N
Sbjct: 115 ASN 117
>gb|ABA95895.1| hypothetical protein LOC_Os12g06880 [Oryza sativa Japonica Group]
gi|125578616|gb|EAZ19762.1| hypothetical protein
OsJ_35342 [Oryza sativa Japonica Group]
Length = 157
Score = 60.5 bits (145), Expect = 2e-07
Identities = 49/131 (37%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Frame = -1
Query: 457 PNPLNADLSPKG-DVPNADDDPEAKVGNADSPTAEV-VEPNVAV---PNAGVE*APNAEV 293
PN D G ++PN +DD G P A V PN V P A V+ PNA
Sbjct: 21 PNAGAGDAPKAGAELPNGEDDGVPNAGVDGWPKAPADVAPNAGVDGWPKAPVDVEPNA-- 78
Query: 292 AKGVCGAPNTPVEVPLNKDPPVCVPKGLV-LPNGVR*NTL*LALFVWANAGCCAPNGLNI 116
GV G P PV+V +PPVC P +V LPNG N L + + W N AP GL
Sbjct: 79 --GVDGWPKAPVDVVPKGEPPVCAPNVVVGLPNGFGANGLEVEVLAWPNP-VWAPKGLLE 135
Query: 115 GWPNTNAEGVP 83
WP + P
Sbjct: 136 VWPKGLVDDCP 146
>ref|XP_003539631.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Glycine
max]
Length = 1007
Score = 59.7 bits (143), Expect = 4e-07
Identities = 53/143 (37%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Frame = +3
Query: 3 SSTPAFGIT---------VGSAPSAAGESSFP----PFAYGTPSAFVFGQPIF---SPFG 134
SSTPAFG + G P+ G S P PF PS FG IF +PFG
Sbjct: 86 SSTPAFGSSSSSFGGSSVFGQKPAFGGFGSTPTQTSPFGAAQPSQPAFGSSIFGSSTPFG 145
Query: 135 AQ-QPAFAQTNNASYNVFHRTPLGSTS-PXXXXXXXXXXXXXXXXXXXAPQTPLATSAFG 308
A QPAF T+ ++ G+TS P A +P AFG
Sbjct: 146 ASSQPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSSP----AFG 201
Query: 309 AYSTPAFGTA---TFGSTTSAVG 368
A STPAFG+ TFGST SA G
Sbjct: 202 ATSTPAFGSTSSPTFGSTGSAFG 224
>ref|XP_002317654.1| nucleoporin family protein [Populus trichocarpa]
gi|222860719|gb|EEE98266.1| nucleoporin family protein
[Populus trichocarpa]
Length = 1007
Score = 58.9 bits (141), Expect = 7e-07
Identities = 41/99 (41%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Frame = +3
Query: 105 FGQPIFSPFGAQQPAFAQTNNASYNVFHRTPLGS-TSPXXXXXXXXXXXXXXXXXXXAPQ 281
FGQ SPFG QPAF QT+NAS N F P GS T+P PQ
Sbjct: 8 FGQSSNSPFGTTQPAFGQTSNASNNPFAPKPFGSPTTPFGAQTGSSIFGGTSTGMFGTPQ 67
Query: 282 TP---------LATSAFGAYSTPAFG---TATFGSTTSA 362
T +T AFGA STPAFG T FG+++S+
Sbjct: 68 TSSFSATNAFGSSTPAFGASSTPAFGASSTPAFGASSSS 106
>ref|XP_006664369.1| PREDICTED: uncharacterized protein DDB_G0274915-like [Oryza
brachyantha]
Length = 976
Score = 58.5 bits (140), Expect = 9e-07
Identities = 50/145 (34%), Positives = 59/145 (40%), Gaps = 24/145 (16%)
Frame = +3
Query: 6 STPAFGITVGSAPSAAGESSFPPF------AYGTPSAFVFGQPIFSPFGAQQPAFAQTNN 167
S PAFG T + A G+ S P F A+G PS FG P SPFG+ PAF +
Sbjct: 103 SAPAFGAT---STGAFGQPSTPAFGAASTPAFGQPSTPAFGTPSSSPFGSSTPAFGASPA 159
Query: 168 ASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXA-------PQTPLATSAFGAYSTPA 326
++ T GS+ A Q +SAFGA STPA
Sbjct: 160 PAFGATSST-FGSSGSLFGQKPSFGGFGSSPSQSSAFGGTFQQTQPAFGSSAFGASSTPA 218
Query: 327 FGTAT-----------FGSTTSAVG 368
FGT T FGSTT A G
Sbjct: 219 FGTTTTPSFGATTTPSFGSTTPAFG 243
>ref|XP_006432656.1| hypothetical protein CICLE_v10000333mg [Citrus clementina]
gi|557534778|gb|ESR45896.1| hypothetical protein
CICLE_v10000333mg [Citrus clementina]
Length = 793
Score = 58.2 bits (139), Expect = 1e-06
Identities = 51/145 (35%), Positives = 59/145 (40%), Gaps = 23/145 (15%)
Frame = +3
Query: 3 SSTPAFGITVGSAPSAA-----GESSFPPFA------YGTPSAFVFGQPIFSPFGA-QQP 146
SST AFG T SA A G +S PPF +G+ S FG S FGA P
Sbjct: 191 SSTSAFGATSTSAFGATSSPAFGATSTPPFGATSTPPFGSSSTSAFGATSTSAFGATSSP 250
Query: 147 AFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXAPQTPLATSAFGAYSTPA 326
AF TN + P GS+S TSAFGA STPA
Sbjct: 251 AFGATNTPPFGATSTPPFGSSS---------------------------TSAFGATSTPA 283
Query: 327 FGTAT-----------FGSTTSAVG 368
FG + FGS+TSA+G
Sbjct: 284 FGATSSPAFGATSSPAFGSSTSAIG 308
>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
Length = 994
Score = 58.2 bits (139), Expect = 1e-06
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = +3
Query: 81 YGTPSAFVFGQPIFSPFGAQQPAFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXX 260
+G+P+ F GQP SPF A QP F QT NAS N F P GSTSP
Sbjct: 2 FGSPNPF--GQPSTSPF-ASQPVFGQTANASNNPFAPKPFGSTSPFGPQTGNTVFGGTST 58
Query: 261 XXXXAPQTPL---ATSAFGAYSTPAFGT--ATFGSTTS 359
A Q+ +T+ FG S+PAFG +TFGS+++
Sbjct: 59 GVFGAAQSSSPFPSTTTFGGSSSPAFGATPSTFGSSST 96
>gb|EAY82387.1| hypothetical protein OsI_37600 [Oryza sativa Indica Group]
Length = 157
Score = 56.6 bits (135), Expect = 3e-06
Identities = 48/131 (36%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Frame = -1
Query: 457 PNPLNADLSPKG-DVPNADDDPEAKVGNADSPTAEV-VEPNVAV---PNAGVE*APNAEV 293
PN D G ++PN +DD G P A V PN V P A V+ PNA
Sbjct: 21 PNAGAGDAPKAGAELPNGEDDGVPNAGVDGWPKAPADVAPNAGVDGWPKAPVDVEPNA-- 78
Query: 292 AKGVCGAPNTPVEVPLNKDPPVCVPKGLV-LPNGVR*NTL*LALFVWANAGCCAPNGLNI 116
GV G PV+V +PPVC P +V LPNG N L + + W N AP GL
Sbjct: 79 --GVDGWLKAPVDVVPKGEPPVCAPNVVVGLPNGFGANGLEVEVLAWPNP-VWAPKGLLE 135
Query: 115 GWPNTNAEGVP 83
WP + P
Sbjct: 136 VWPKGLVDDCP 146
>gb|EEE52825.1| hypothetical protein OsJ_35341 [Oryza sativa Japonica Group]
Length = 903
Score = 56.6 bits (135), Expect = 3e-06
Identities = 46/130 (35%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Frame = +3
Query: 6 STPAFGITVGSAPSAAGESSFPPF------AYGTPSAFVFGQPIFSPFGAQQPAFAQTNN 167
STPAFG T + A G+ S P F A+G PS FG P SPFG+ PAF +
Sbjct: 74 STPAFGST---STGAFGQPSTPAFGATSAGAFGQPSTPAFGTPSSSPFGSSAPAFGASPA 130
Query: 168 ASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXAPQTPLATSAFGAYSTPAFGTAT-- 341
++ G+TS + +S FGA STPAFG T
Sbjct: 131 PAF--------GATSSTFG-------------------SAFGSSTFGASSTPAFGATTTP 163
Query: 342 -FGSTTSAVG 368
FG+TT A G
Sbjct: 164 AFGTTTPAFG 173
>ref|XP_004495523.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X8
[Cicer arietinum]
Length = 987
Score = 56.2 bits (134), Expect = 4e-06
Identities = 49/130 (37%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Frame = +3
Query: 3 SSTPAFGITVGSAPSAAGESSFPPFAYGTPS---AFVFGQ-PIFSPFGA----QQPAFAQ 158
SS+PAFG S+ A G SS P F + S + VFGQ P F FG+ QPAF
Sbjct: 81 SSSPAFG----SSMPAFGASSTPAFGSSSSSFGGSSVFGQKPAFGAFGSVTQPSQPAFGS 136
Query: 159 TNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXAPQTPLATSAFGAYSTPAFG-- 332
T S F + GS++P +T +FGA STPAFG
Sbjct: 137 TTQPSQPAFGSSIFGSSTPFGASSQPAFGSTGTPAFGAT-----STPSFGATSTPAFGAA 191
Query: 333 -TATFGSTTS 359
T TFGST+S
Sbjct: 192 STPTFGSTSS 201
>gb|EEC68918.1| hypothetical protein OsI_37599 [Oryza sativa Indica Group]
Length = 944
Score = 56.2 bits (134), Expect = 4e-06
Identities = 47/134 (35%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Frame = +3
Query: 6 STPAFGITVGSAPSAAGESSFPPF------AYGTPSAFVFGQPIFSPFGAQQPAFAQTNN 167
STPAFG T + A G+ S P F A+G PS FG P SPFG+ PAF +
Sbjct: 74 STPAFGST---STGAFGQPSTPAFGATSAGAFGQPSTPAFGTPSSSPFGSSAPAFGASPA 130
Query: 168 ASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXA-------PQTPLATSAFGAYSTPA 326
++ T GS S A Q +S FGA STPA
Sbjct: 131 PAFGATSST-FGSGSSLFGQKPSFGGFGSSPSQSNAFGGTFQQTQPAFGSSTFGASSTPA 189
Query: 327 FGTAT---FGSTTS 359
FG T FG+TT+
Sbjct: 190 FGATTTPAFGATTT 203
>ref|XP_006594707.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2
[Glycine max]
Length = 1016
Score = 55.5 bits (132), Expect = 7e-06
Identities = 50/139 (35%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Frame = +3
Query: 3 SSTPAFGIT---------VGSAPSAAGESSFP----PFAYGTPSAFVFGQPIF---SPFG 134
SSTPAFG + G P+ G S P PF PS FG IF +PFG
Sbjct: 87 SSTPAFGSSSSSFGGSSVFGQKPAFGGFGSTPTQTTPFGAAQPSQPAFGSSIFGSSTPFG 146
Query: 135 AQ-QPAFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXAPQTPLATSAFGA 311
A QPAF T+N ++ G+TS A TP AFGA
Sbjct: 147 ASSQPAFGATSNPAFGATSTPAFGATSTPAFG---------------ATSTP----AFGA 187
Query: 312 YSTPAFG---TATFGSTTS 359
STP+FG T FG+T+S
Sbjct: 188 TSTPSFGATSTPAFGATSS 206
>ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
[Solanum tuberosum]
Length = 993
Score = 55.5 bits (132), Expect = 7e-06
Identities = 42/98 (42%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +3
Query: 93 SAFVFGQPIFSPFGAQQPAFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXX 272
S FGQ SPFG+Q F QT+N N F P GST+P
Sbjct: 4 STNAFGQSSSSPFGSQS-VFGQTSN---NPFAPKPFGSTNPFGSQSGGSFFGSTSTGVFG 59
Query: 273 APQT--PL-ATSAFGAYSTPAFG---TATFGSTTSAVG 368
PQ+ PL +TS FGA S+PAFG T TFGS++SA G
Sbjct: 60 TPQSSSPLGSTSVFGASSSPAFGASTTPTFGSSSSAFG 97
>ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Solanum tuberosum] gi|565389417|ref|XP_006360452.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Solanum tuberosum]
Length = 994
Score = 55.5 bits (132), Expect = 7e-06
Identities = 42/98 (42%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +3
Query: 93 SAFVFGQPIFSPFGAQQPAFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXX 272
S FGQ SPFG+Q F QT+N N F P GST+P
Sbjct: 4 STNAFGQSSSSPFGSQS-VFGQTSN---NPFAPKPFGSTNPFGSQSGGSFFGSTSTGVFG 59
Query: 273 APQT--PL-ATSAFGAYSTPAFG---TATFGSTTSAVG 368
PQ+ PL +TS FGA S+PAFG T TFGS++SA G
Sbjct: 60 TPQSSSPLGSTSVFGASSSPAFGASTTPTFGSSSSAFG 97
>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoformX1
[Glycine max]
Length = 1038
Score = 55.5 bits (132), Expect = 7e-06
Identities = 50/139 (35%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Frame = +3
Query: 3 SSTPAFGIT---------VGSAPSAAGESSFP----PFAYGTPSAFVFGQPIF---SPFG 134
SSTPAFG + G P+ G S P PF PS FG IF +PFG
Sbjct: 87 SSTPAFGSSSSSFGGSSVFGQKPAFGGFGSTPTQTTPFGAAQPSQPAFGSSIFGSSTPFG 146
Query: 135 AQ-QPAFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXAPQTPLATSAFGA 311
A QPAF T+N ++ G+TS A TP AFGA
Sbjct: 147 ASSQPAFGATSNPAFGATSTPAFGATSTPAFG---------------ATSTP----AFGA 187
Query: 312 YSTPAFG---TATFGSTTS 359
STP+FG T FG+T+S
Sbjct: 188 TSTPSFGATSTPAFGATSS 206
>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
[Vitis vinifera]
Length = 1013
Score = 55.1 bits (131), Expect = 1e-05
Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Frame = +3
Query: 105 FGQPIFSPFGAQQPAFAQTNNASYNVFHRTPLGSTSPXXXXXXXXXXXXXXXXXXXAPQ- 281
FGQ SPFG+Q F QTNNA+ N F P GST+P A Q
Sbjct: 8 FGQSSSSPFGSQS-VFGQTNNATTNPFAPKPFGSTTPFGAQTGGSIFGGTSTGVFGATQS 66
Query: 282 -TPL-ATSAFGAYSTPAFG----------TATFGSTTSAVG 368
+PL +T+ FGA S+PAFG T FGS++S+ G
Sbjct: 67 SSPLPSTATFGASSSPAFGSSVPAFGASSTPAFGSSSSSFG 107