BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00008525
         (675 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76390.1| unknown [Picea sitchensis]                             288   1e-75
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   253   5e-65
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   252   8e-65
ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [A...   251   2e-64
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   249   7e-64
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   247   2e-63
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   246   5e-63
gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [The...   244   1e-62
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   244   2e-62
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              244   2e-62
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   243   3e-62
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   241   2e-61
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             239   4e-61
gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Th...   235   8e-60
gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Th...   235   1e-59
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   233   4e-59
ref|XP_002315726.1| predicted protein [Populus trichocarpa]           233   4e-59
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab...   232   7e-59
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         232   9e-59
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop...   229   8e-58

>gb|ADE76390.1| unknown [Picea sitchensis]
          Length = 334

 Score =  288 bits (736), Expect = 1e-75
 Identities = 139/190 (73%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = -3

Query: 568 ASEETCARLET-ATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQS 392
           AS +TC R+E    N +V++VK +WFPTHF+L ITDG+HAWI   SEKNVADRASQWDQS
Sbjct: 3   ASADTCVRIEANGANRDVIYVKSTWFPTHFSLSITDGLHAWICDGSEKNVADRASQWDQS 62

Query: 391 VSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVT 212
           VSEYLEDA+ YL  QQPGS Y+ +DAGN  +RLSWTLEK GTKLE RWKC++A N+QKV 
Sbjct: 63  VSEYLEDAQRYLSYQQPGSAYTIKDAGNGSIRLSWTLEKQGTKLEWRWKCDKAPNEQKVI 122

Query: 211 RSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAV 32
             ILDFLM+ANT+LS+EVVRKTRSF+RMKVEAEKCL QSEK KNEK EFE  ++AKFVAV
Sbjct: 123 SDILDFLMDANTRLSEEVVRKTRSFDRMKVEAEKCLAQSEKFKNEKAEFETTIFAKFVAV 182

Query: 31  LNSKKAKLRE 2
           LNSKKAKLRE
Sbjct: 183 LNSKKAKLRE 192


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  253 bits (645), Expect = 5e-65
 Identities = 123/193 (63%), Positives = 146/193 (75%)
 Frame = -3

Query: 580 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQW 401
           M + + + TC +L   +N E +FVKG+WF +HF LFITDG+ +W   ASE+ V +RASQW
Sbjct: 1   MGSASPKHTCLKL-VISNKEQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQW 59

Query: 400 DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 221
           DQ VSEY++ A  YLG QQPGS Y F DAG  H RLSWT EK+GTKLE RWKC+ ++N +
Sbjct: 60  DQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNSK 119

Query: 220 KVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 41
           K T  ILDFLM+AN +LSDEVV KT SFERMKVEAEKCL QSEKL  EK EFE  +YAKF
Sbjct: 120 KTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIYAKF 179

Query: 40  VAVLNSKKAKLRE 2
           + VLNSKK KLRE
Sbjct: 180 LGVLNSKKKKLRE 192


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  252 bits (643), Expect = 8e-65
 Identities = 121/193 (62%), Positives = 147/193 (76%)
 Frame = -3

Query: 580 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQW 401
           M + + + TC +L   +N E +FVKG+WF ++F LFITDG+H+W   ASE+ V +RASQW
Sbjct: 1   MGSPSPKHTCLKL-VISNKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQW 59

Query: 400 DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 221
           DQ VSEY++    YLG QQPGS+Y F DAG  H RLSWT EK+GTKLE RWKC+ ++N +
Sbjct: 60  DQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSK 119

Query: 220 KVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 41
           K T  ILDFLM+AN +LSDEVV KT SFERMKVEAEKCL QSEKL  EK EFE  +YAKF
Sbjct: 120 KTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAKF 179

Query: 40  VAVLNSKKAKLRE 2
           + VLN+KK KLRE
Sbjct: 180 LGVLNAKKKKLRE 192


>ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [Amborella trichopoda]
           gi|548855821|gb|ERN13684.1| hypothetical protein
           AMTR_s00049p00133960 [Amborella trichopoda]
          Length = 235

 Score =  251 bits (640), Expect = 2e-64
 Identities = 119/187 (63%), Positives = 146/187 (78%)
 Frame = -3

Query: 562 EETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSVSE 383
           + +C RL+  +   V ++ G+W P+ F+L ITDG+  W   ASE+ V +RA+QWDQ VSE
Sbjct: 6   KHSCMRLDLGSKDGVFYIMGTWLPSRFSLSITDGLRTWTCNASEEEVENRANQWDQLVSE 65

Query: 382 YLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTRSI 203
           YLE A HYLG QQPGS+Y+F  AG+++ RLSW  EK GTKLE RWKCE++++D+KVT SI
Sbjct: 66  YLETAEHYLGFQQPGSVYAFTPAGDENRRLSWAYEKQGTKLEWRWKCEKSSDDKKVTASI 125

Query: 202 LDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNS 23
           LDFLMEANT+LSDEVVR TRSFERMKVEAEKCL QSE+   +K EFE   YAKFVAVLNS
Sbjct: 126 LDFLMEANTRLSDEVVRNTRSFERMKVEAEKCLAQSERFNIDKAEFESAAYAKFVAVLNS 185

Query: 22  KKAKLRE 2
           KK KLR+
Sbjct: 186 KKMKLRD 192


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  249 bits (635), Expect = 7e-64
 Identities = 120/189 (63%), Positives = 145/189 (76%)
 Frame = -3

Query: 568 ASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSV 389
           A+  TC +LE     + +FVKG+WF THF L ITDG++AW+  ASE+ V DRA+ WDQ V
Sbjct: 3   ATSHTCLKLEIPDATDPIFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAALWDQPV 62

Query: 388 SEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTR 209
           +EY++ A  YLG QQPGS+Y F DA +   RLSWT EK+GTKLE RWKC  A N +KVT 
Sbjct: 63  TEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTA 122

Query: 208 SILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVL 29
            ILDFLM+AN +LSDEVV KT+SFER+KVEAEKCL QSE+ KNEK EFE  +YAKF+ VL
Sbjct: 123 GILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIYAKFLGVL 182

Query: 28  NSKKAKLRE 2
           NSKK+KLRE
Sbjct: 183 NSKKSKLRE 191


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  247 bits (631), Expect = 2e-63
 Identities = 118/188 (62%), Positives = 144/188 (76%)
 Frame = -3

Query: 565 SEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSVS 386
           +  TC +LE +   + +FVKG+WF THF L ITDG++ W+  ASE+ V DRA+QWDQ V+
Sbjct: 3   TRHTCLKLEISDATDPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQWDQPVT 62

Query: 385 EYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTRS 206
           EY++ A  YLG QQPGS+Y F DA +   RLSWT EK+GTKLE RWKC  A N +KVT  
Sbjct: 63  EYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVTAG 122

Query: 205 ILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLN 26
           ILDFLM+AN +LSDEVV KT+SFER+KVEAEKCL QSE+  NEK EFE  +YAKF+ VLN
Sbjct: 123 ILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAKFLGVLN 182

Query: 25  SKKAKLRE 2
           SKK+KLRE
Sbjct: 183 SKKSKLRE 190


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  246 bits (628), Expect = 5e-63
 Identities = 118/176 (67%), Positives = 141/176 (80%)
 Frame = -3

Query: 529 NGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSVSEYLEDARHYLGN 350
           NG+  +VKG+WF THF L ITDG++AW+  ASE+ V DRA+QWDQ V+EY++ A  YLG 
Sbjct: 2   NGDETYVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLGF 61

Query: 349 QQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTRSILDFLMEANTKL 170
           QQPGS+Y+F DA +   RLSWT EK+GTKLE RWKC  A N +KVT  ILDFLM+AN +L
Sbjct: 62  QQPGSVYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRL 121

Query: 169 SDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSKKAKLRE 2
           SDEVV KT+SFER+KVEAEKCL QSE+ KNEK EFE  VYAKF+ VLNSKK+KLRE
Sbjct: 122 SDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRE 177


>gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  244 bits (624), Expect = 1e-62
 Identities = 119/196 (60%), Positives = 149/196 (76%), Gaps = 3/196 (1%)
 Frame = -3

Query: 580 METGASE---ETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRA 410
           MET +S     TC +LE  +  E +FVKG+WF  HF + ITDG+HAW+  A+E+ V +RA
Sbjct: 1   METSSSSTTRHTCLKLEIPST-EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERA 59

Query: 409 SQWDQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERAT 230
           +QWDQ V+EY+E A  YLG QQ GS+Y F DAG+DH RLSW  EK+GTKLE RWK   + 
Sbjct: 60  AQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSP 119

Query: 229 NDQKVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVY 50
           + QK+T  ILDFLM+AN +LS+EV RKT+SFE++KVEAEKCL QSE+  NEK EFE ++Y
Sbjct: 120 DSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIY 179

Query: 49  AKFVAVLNSKKAKLRE 2
           AKF+ VLNSKKAKLRE
Sbjct: 180 AKFLGVLNSKKAKLRE 195


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  244 bits (623), Expect = 2e-62
 Identities = 113/185 (61%), Positives = 140/185 (75%)
 Frame = -3

Query: 556 TCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSVSEYL 377
           +C +L+     E +F+K +WFP+HF L ITDG+HAW+  ASE  V +RA+QWDQ VS+Y+
Sbjct: 8   SCLKLQIPNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYI 67

Query: 376 EDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTRSILD 197
             A  +LG QQPGS+Y F DAG+ H RLSWT EK+GTKLE RWKC  + + +  T  +LD
Sbjct: 68  ALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLD 127

Query: 196 FLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSKK 17
           FLM AN +LS+EVV KT+SFER+KVEAEKCL QSEK  NEK EFE  +YAKF+ VLNSKK
Sbjct: 128 FLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKK 187

Query: 16  AKLRE 2
           AKLRE
Sbjct: 188 AKLRE 192


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  244 bits (623), Expect = 2e-62
 Identities = 113/185 (61%), Positives = 140/185 (75%)
 Frame = -3

Query: 556 TCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSVSEYL 377
           +C +L+     E +F+K +WFP+HF L ITDG+HAW+  ASE  V +RA+QWDQ VS+Y+
Sbjct: 8   SCLKLQIPNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYI 67

Query: 376 EDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTRSILD 197
             A  +LG QQPGS+Y F DAG+ H RLSWT EK+GTKLE RWKC  + + +  T  +LD
Sbjct: 68  ALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLD 127

Query: 196 FLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSKK 17
           FLM AN +LS+EVV KT+SFER+KVEAEKCL QSEK  NEK EFE  +YAKF+ VLNSKK
Sbjct: 128 FLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKK 187

Query: 16  AKLRE 2
           AKLRE
Sbjct: 188 AKLRE 192


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  243 bits (621), Expect = 3e-62
 Identities = 116/192 (60%), Positives = 145/192 (75%)
 Frame = -3

Query: 577 ETGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWD 398
           E   +  TC +LE     E +FVKG+WF +HF L ITDG++AW+  A+E  V +RA+QWD
Sbjct: 9   EAETARHTCLKLEIT---EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQWD 65

Query: 397 QSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQK 218
           Q VSEY+  A HYLG QQPGSIY F DAG+ H RLSWT EK+GTKLE RWKC+ + +++ 
Sbjct: 66  QPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNKM 125

Query: 217 VTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFV 38
            T  ILDFLM+AN +LS+EVV+KT SFER+K EA+KCL QSE+   EKTEFE  +YAKF+
Sbjct: 126 TTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKFL 185

Query: 37  AVLNSKKAKLRE 2
           AVLNSKK KLR+
Sbjct: 186 AVLNSKKRKLRQ 197


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  241 bits (614), Expect = 2e-61
 Identities = 115/188 (61%), Positives = 142/188 (75%)
 Frame = -3

Query: 565 SEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSVS 386
           +  TC +LE     + +F KG+WF THF L ITDG++AW+  ASE+ V DRA+QWDQ V+
Sbjct: 3   TRHTCLKLEIPDATDPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVT 62

Query: 385 EYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTRS 206
           EY++ A  YLG QQPGS+Y F DA +   RLSWT EK+GTKLE RWK   A N +KVT  
Sbjct: 63  EYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSKKVTAG 122

Query: 205 ILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLN 26
           ILDFLM+AN +LSDEVV KT+SFER+KVE +KCL QSE+ KNEK EFE  +Y+KF+ VLN
Sbjct: 123 ILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSKFLGVLN 182

Query: 25  SKKAKLRE 2
           SKK+KLRE
Sbjct: 183 SKKSKLRE 190


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  239 bits (611), Expect = 4e-61
 Identities = 115/189 (60%), Positives = 143/189 (75%)
 Frame = -3

Query: 568 ASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSV 389
           +   TC +LE   + + +FV  +WFP+HF L +TDG HAWI  ASE+ V DRA+QWDQ V
Sbjct: 4   SKRHTCLKLEPK-DSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAAQWDQPV 62

Query: 388 SEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTR 209
            EY+  A  YLG QQP S+Y+F DAG+ H RLSWT EK+GTKL+ RWKC+ A + +K T 
Sbjct: 63  PEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPDSKKTTA 122

Query: 208 SILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVL 29
             LDFLM+AN +LS+EVV K++SFER+KVEAEKCL QSEK+ NEK EFE  +YAKF+ VL
Sbjct: 123 ETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYAKFLGVL 182

Query: 28  NSKKAKLRE 2
           NSKKAKLRE
Sbjct: 183 NSKKAKLRE 191


>gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  235 bits (600), Expect = 8e-60
 Identities = 119/209 (56%), Positives = 149/209 (71%), Gaps = 16/209 (7%)
 Frame = -3

Query: 580 METGASE---ETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRA 410
           MET +S     TC +LE  +  E +FVKG+WF  HF + ITDG+HAW+  A+E+ V +RA
Sbjct: 1   METSSSSTTRHTCLKLEIPST-EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERA 59

Query: 409 SQWDQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERAT 230
           +QWDQ V+EY+E A  YLG QQ GS+Y F DAG+DH RLSW  EK+GTKLE RWK   + 
Sbjct: 60  AQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSP 119

Query: 229 NDQKVTRSILDFLMEANTKLS-------------DEVVRKTRSFERMKVEAEKCLVQSEK 89
           + QK+T  ILDFLM+AN +LS             +EV RKT+SFE++KVEAEKCL QSE+
Sbjct: 120 DSQKITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSER 179

Query: 88  LKNEKTEFEHDVYAKFVAVLNSKKAKLRE 2
             NEK EFE ++YAKF+ VLNSKKAKLRE
Sbjct: 180 STNEKMEFESEIYAKFLGVLNSKKAKLRE 208


>gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  235 bits (599), Expect = 1e-59
 Identities = 119/210 (56%), Positives = 149/210 (70%), Gaps = 17/210 (8%)
 Frame = -3

Query: 580 METGASE---ETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRA 410
           MET +S     TC +LE  +  E +FVKG+WF  HF + ITDG+HAW+  A+E+ V +RA
Sbjct: 1   METSSSSTTRHTCLKLEIPST-EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERA 59

Query: 409 SQWDQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERAT 230
           +QWDQ V+EY+E A  YLG QQ GS+Y F DAG+DH RLSW  EK+GTKLE RWK   + 
Sbjct: 60  AQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSP 119

Query: 229 NDQKVTRSILDFLMEANTKLS--------------DEVVRKTRSFERMKVEAEKCLVQSE 92
           + QK+T  ILDFLM+AN +LS              +EV RKT+SFE++KVEAEKCL QSE
Sbjct: 120 DSQKITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSE 179

Query: 91  KLKNEKTEFEHDVYAKFVAVLNSKKAKLRE 2
           +  NEK EFE ++YAKF+ VLNSKKAKLRE
Sbjct: 180 RSTNEKMEFESEIYAKFLGVLNSKKAKLRE 209


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score =  233 bits (594), Expect = 4e-59
 Identities = 111/186 (59%), Positives = 142/186 (76%)
 Frame = -3

Query: 559 ETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQWDQSVSEY 380
           ++C +LE   + + +FVKG+WF + F L ITDG++AW+  ASE  V DRA+QWDQ V +Y
Sbjct: 11  QSCLKLEPKES-QPIFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRAAQWDQPVPDY 69

Query: 379 LEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTRSIL 200
           +  A  YLG Q P S+Y F DAG+ H RLSWT +K+GTKLE RWKCE + N ++ T ++L
Sbjct: 70  VSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSPNSKETTAAVL 129

Query: 199 DFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSK 20
           DFLM+AN  LS+EVVRKT+SFER+KVEAE CL+QSE++ NEK EFE  VYAKF+ VLNSK
Sbjct: 130 DFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVYAKFLGVLNSK 189

Query: 19  KAKLRE 2
           K KLRE
Sbjct: 190 KTKLRE 195


>ref|XP_002315726.1| predicted protein [Populus trichocarpa]
          Length = 233

 Score =  233 bits (594), Expect = 4e-59
 Identities = 113/193 (58%), Positives = 144/193 (74%)
 Frame = -3

Query: 580 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQW 401
           ME+  +  TC +LE     E +F+KG+WFP HF L ITDG+++W   A+E+ V DRA+QW
Sbjct: 1   MESTMARHTCLKLEIP---EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQW 57

Query: 400 DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 221
           DQ VS Y++ A  +LG Q PGS+Y F DAG  + RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 58  DQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTK 117

Query: 220 KVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 41
           K T  ILDFLM+AN +LS+EVVRKT+SFE++K EAEKCL QSEK  ++K EFE  VYAKF
Sbjct: 118 KTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAKF 177

Query: 40  VAVLNSKKAKLRE 2
           + VLNSKK KLRE
Sbjct: 178 LGVLNSKKRKLRE 190


>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
           lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
           ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  232 bits (592), Expect = 7e-59
 Identities = 113/192 (58%), Positives = 145/192 (75%)
 Frame = -3

Query: 580 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQW 401
           +E+  ++ TC RLE +   + +FVKG+W  +HF + +TDG  +WI  A+E+ VA+RA+QW
Sbjct: 2   VESEKTKHTCLRLEIS-GADPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAAQW 60

Query: 400 DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 221
           DQ VSEYLE A  YLG QQP S+Y F DA     RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 61  DQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHDSK 120

Query: 220 KVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 41
           K+T  ILDFL+EAN +LS+EVV KTRSFE+MK EAE+CL Q EKL  EKTEFE+  YAKF
Sbjct: 121 KITVGILDFLLEANIRLSEEVVNKTRSFEKMKCEAERCLAQGEKLCEEKTEFENATYAKF 180

Query: 40  VAVLNSKKAKLR 5
           ++VLN+KKAKLR
Sbjct: 181 LSVLNAKKAKLR 192


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  232 bits (591), Expect = 9e-59
 Identities = 113/193 (58%), Positives = 143/193 (74%)
 Frame = -3

Query: 580 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQW 401
           ME+  +  TC +LE     E +F+KG+WFP HF L ITDG+++W   A+E+ V  RA+QW
Sbjct: 1   MESTMARHTCLKLEIP---EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQW 57

Query: 400 DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 221
           DQ VS Y++ A  +LG Q PGS+Y F DAG  + RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 58  DQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTK 117

Query: 220 KVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 41
           K T  ILDFLM+AN +LS+EVVRKT+SFER+K EAEKCL QSEK  ++K EFE  VYAKF
Sbjct: 118 KTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKF 177

Query: 40  VAVLNSKKAKLRE 2
           + VLNSKK KLRE
Sbjct: 178 LGVLNSKKRKLRE 190


>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
           gi|238479872|ref|NP_001154639.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
           repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
           putative double strand break repair protein [Arabidopsis
           thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643196|gb|AEE76717.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|332643197|gb|AEE76718.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
          Length = 264

 Score =  229 bits (583), Expect = 8e-58
 Identities = 112/192 (58%), Positives = 145/192 (75%)
 Frame = -3

Query: 580 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGIHAWITKASEKNVADRASQW 401
           +E+  ++ TC RLE +   + +FVKG+W  + F + +TDG  +WI  A+E+ VA+RA+QW
Sbjct: 18  VESEKTKHTCLRLEIS-GADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQW 76

Query: 400 DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 221
           DQ VSEYL+ A  YLG QQP S+YSF DA     RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 77  DQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSK 136

Query: 220 KVTRSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 41
           K+T  ILDFLMEAN +LS+EVV KTRSFE+M+ EAE+CL Q EKL +EKTEFE   YAKF
Sbjct: 137 KITVGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATYAKF 196

Query: 40  VAVLNSKKAKLR 5
           ++VLN+KKAKLR
Sbjct: 197 LSVLNAKKAKLR 208