BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00008510
         (3348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006390286.1| hypothetical protein EUTSA_v10018062mg [Eutr...   986   0.0  
gb|EMT31761.1| 5'-3' exoribonuclease 3 [Aegilops tauschii]            978   0.0  
gb|EMS57631.1| 5'-3' exoribonuclease 3 [Triticum urartu]              927   0.0  
ref|XP_006417024.1| hypothetical protein EUTSA_v10009553mg, part...   915   0.0  
ref|XP_004301701.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fra...   907   0.0  
ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana] ...   896   0.0  
ref|XP_006279471.1| hypothetical protein CARUB_v10025807mg [Caps...   894   0.0  
dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]        893   0.0  
ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thalian...   889   0.0  
gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana...   880   0.0  
dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]        829   0.0  
ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   825   0.0  
emb|CBI26575.3| unnamed protein product [Vitis vinifera]              790   0.0  
ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula] ...   759   0.0  
gb|EXB91256.1| 5'-3' exoribonuclease 3 [Morus notabilis]              710   0.0  
ref|XP_004308764.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fra...   700   0.0  
ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus ...   684   0.0  
gb|ESW04477.1| hypothetical protein PHAVU_011G097800g [Phaseolus...   681   0.0  
ref|XP_005525544.1| PREDICTED: 5'-3' exoribonuclease 2 [Pseudopo...   675   0.0  
ref|XP_005486835.1| PREDICTED: 5'-3' exoribonuclease 2 [Zonotric...   674   0.0  

>ref|XP_006390286.1| hypothetical protein EUTSA_v10018062mg [Eutrema salsugineum]
            gi|557086720|gb|ESQ27572.1| hypothetical protein
            EUTSA_v10018062mg [Eutrema salsugineum]
          Length = 1023

 Score =  986 bits (2549), Expect = 0.0
 Identities = 490/866 (56%), Positives = 604/866 (69%), Gaps = 35/866 (4%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVP+FYRWLA+KYP+I+ D VEEE   I GV+IP+D+SKPNPNN+E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMIVADVVEEEPVEIEGVKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PCFHPEDRPSP T+E+VF+ MFDYIDR+F +VRPRKLLYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                      PPKV+SQV DSNVITPGTEFM  LS+ LQYY+HL
Sbjct: 121  SAKDASDAAAEEERLREEFEREGRKLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHL 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            RLN+D GW+N+KVILSDANVPGEGEHKIMS+IR+QRN   +DPNTRHCLYGLDADLIMLG
Sbjct: 181  RLNYDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 240

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRESKIEKEANGSFARTPY 1026
            LATHEVHFSILREV+    + +KCF+CGQ+GH A++C+GK K+ +    E    F + PY
Sbjct: 241  LATHEVHFSILREVVFTPGQQDKCFLCGQMGHMASDCEGKAKKRAGEFDEKGDGFVKKPY 300

Query: 1027 QFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGAIN 1206
            QFL+IW LREYLE +M+IPNPPFEID ER+VDDF+FICFFVGNDFLPHMPTLEIREGAIN
Sbjct: 301  QFLHIWILREYLEFEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAIN 360

Query: 1207 LLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRS-FEQKRSSEIAKQ 1383
            LLM VYKKEF ++ GYLT+  + +L   E F+Q VG++ED IF+KR+   Q+++  I   
Sbjct: 361  LLMAVYKKEFRSLDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRTRLHQRQAERIKGD 420

Query: 1384 RSSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSAAVEDRASA----------- 1530
            ++  K+  D   TV+  S  ++P                     D  SA           
Sbjct: 421  KARKKRMDDAAPTVQPDS--LVPVARFSGSRLASAPAPSPFQANDGGSAPPQKARRVSSG 478

Query: 1531 -------------------EVEEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKER 1653
                               E +E+LK K+K  +REK D  +S   EEDKVKLG+ GW+ER
Sbjct: 479  SSIGAAIVDVENSLESDEHENKEELKTKLKELIREKSDAFNSDTHEEDKVKLGEPGWRER 538

Query: 1654 YYAEKFQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTG 1833
            YY EKF   T EE E++R+D+V KYTEGLCWVM YY  GV SW WFYPYHYAPFASD   
Sbjct: 539  YYEEKFSVVTPEEMERLRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLKD 598

Query: 1834 VSKLKITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLN 2013
            + +L I F LG PFKPFNQLLGV PAASA ALP +YR LM DPNSP+IDFYP+DFE+D+N
Sbjct: 599  LGELDIQFELGTPFKPFNQLLGVFPAASAHALPERYRTLMTDPNSPIIDFYPTDFEVDMN 658

Query: 2014 GKRFAWQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYN 2193
            GKR++WQG+AKLPFIDE RLL+AV  VE +LT+ EK RNS   D+LF+ + H LA+ I++
Sbjct: 659  GKRYSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSMMCDMLFIATSHRLAELIFS 718

Query: 2194 LYKKYANLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNS 2373
            L      LS ++R  L+  I P+ S+G+NGY++PC G  +  PP F SP+  MEDI+ N 
Sbjct: 719  LDNHCRQLSARERVDLKVKIRPELSDGMNGYLTPCSG--ETHPPIFRSPMEGMEDILANQ 776

Query: 2374 VLSVIFRLGEGCSHIPRPLEGVVMPKQTVYPGHMK-PTSIWHDEGGQK---ERIQNRAPV 2541
            V+  I+RL +   HI RP  GV+ PK+ V  G +K P ++WH+E G++      Q R   
Sbjct: 777  VICCIYRLPDAHKHITRPPPGVIFPKKIVNIGDLKPPPALWHEENGRRPMHNNHQGRQNP 836

Query: 2542 KGSLQGPSLAEAALRLVNNCLQGKFD 2619
             GS+ G  L +AA RLV+N L  + D
Sbjct: 837  PGSVSGRHLGDAAHRLVSNNLHTRTD 862


>gb|EMT31761.1| 5'-3' exoribonuclease 3 [Aegilops tauschii]
          Length = 1053

 Score =  978 bits (2527), Expect = 0.0
 Identities = 489/908 (53%), Positives = 620/908 (68%), Gaps = 53/908 (5%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVP+FYRWLA+KYP+++VD VEEE   I GV++P+D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVQVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PCFHPEDRPSP T+ +VF+ MFDYIDR+F +VRPRKLLYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                      PPK++SQ  DSNVITPGTEFM  LSV LQYYIH 
Sbjct: 121  AAKDAADAAEEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYIHR 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            RLN+D GW+ +KVILSDANVPGEGEHKIMS+IR  RN   ++PNTRHCLYGLDADLIML 
Sbjct: 181  RLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGNRNLPGFNPNTRHCLYGLDADLIMLA 240

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES-KIEKEANGSFARTP 1023
            LATHEVHFSILREV+    + +KCF+CGQ+GH A  C+GK KR++ + +++ +    + P
Sbjct: 241  LATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDEIVPKKP 300

Query: 1024 YQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGAI 1203
            YQFLNIWTLREYLE + ++PNP FE D ER++DDF+F+CFFVGNDFLPHMPTLEIREGAI
Sbjct: 301  YQFLNIWTLREYLEYEFRMPNPAFETDIERIIDDFIFMCFFVGNDFLPHMPTLEIREGAI 360

Query: 1204 NLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRS-FEQKRSSEIAK 1380
            NLLM VYKKEF  MGGYLT++    L+  EHF+Q VG+YED IF+KR+   Q+++  I +
Sbjct: 361  NLLMAVYKKEFPNMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIKR 420

Query: 1381 QRSSNKKAQDLKATVR--------------------------ESSNTVMPCKSXXXXXXX 1482
             ++  K+  DL   VR                             +T    ++       
Sbjct: 421  DKAQAKRGDDLDPHVRGDLIVPVARFQGSRLASGAVASPYEHNGRSTEKGSQAKKARVSS 480

Query: 1483 XXXXXXSAAVEDRASAEVE-----EDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWK 1647
                  +A VE   S E +     EDLK  +K+ALR+K DL +S   EEDK+KLG+ GW+
Sbjct: 481  SDSSLSAAVVEAEISVEAQARENKEDLKSMLKVALRDKSDLFNSENPEEDKIKLGEPGWR 540

Query: 1648 ERYYAEKFQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDF 1827
            ERYY +KF A T E+ E+IR D+V KYTEGLCWVM YYY GV SW WFYPYHYAPFASD 
Sbjct: 541  ERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 600

Query: 1828 TGVSKLKITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEID 2007
             G+ +L ITF LG PFKPF+QL+GV PAAS+ ALPV+YR LM DP+SP+IDFYP DFE+D
Sbjct: 601  KGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDPSSPIIDFYPIDFEVD 660

Query: 2008 LNGKRFAWQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDI 2187
            +NGKRF+WQG+AKLPFIDE RLL  +K VE +LT  E  RNST +++LFV   H ++  I
Sbjct: 661  MNGKRFSWQGIAKLPFIDEARLLSEIKKVEHTLTPEEARRNSTMYNMLFVNGAHPISPYI 720

Query: 2188 YNLYKKYANLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIIN 2367
            Y+L  K+ +L   +R +++E +NPK+S G+NGY+S C G  D  PP F SP++ +EDI++
Sbjct: 721  YSLSSKFGHLPDNERNEIKEELNPKASGGMNGYISLCGG--DPSPPVFRSPVDGLEDIMD 778

Query: 2368 NSVLSVIFRLGEGCSHIPRPLEGVVMPKQTVYPGHMKPTSI-WHDEGGQKERIQNRAPV- 2541
            N V+  I++L +   HI RP  GV +PK+ V  G +KP  + WH++ G++    NR    
Sbjct: 779  NQVICSIYKLPDPHKHIARPPPGVTIPKKIVEAGDLKPPPVLWHEDNGRRPYDNNRRHCD 838

Query: 2542 -------KGSLQGPSLAEAALRLVNNCLQGK----------FDSFLKGRDMVSEAKPK-K 2667
                    GS+QG  L EAA RLV N L  +          + + + G    +   P+ +
Sbjct: 839  NSSRQNPAGSIQGRQLGEAAHRLVANSLNVRGGGQYPPARPYQTIMNGMHYPNGMPPRME 898

Query: 2668 RPAGPVGY 2691
            +PAG  G+
Sbjct: 899  QPAGRSGW 906


>gb|EMS57631.1| 5'-3' exoribonuclease 3 [Triticum urartu]
          Length = 1033

 Score =  927 bits (2396), Expect = 0.0
 Identities = 488/1030 (47%), Positives = 635/1030 (61%), Gaps = 56/1030 (5%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVP+FYRWLA+KYP+++VD VEEE   I GV++P+D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVQVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PCFHPEDRPSP T+ +VF+ MFDYIDR+F +VRPRKL+YMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                      PPK++SQ  DSNVITPGTEFM  LSV LQYYIH 
Sbjct: 121  AAKDAADAAEEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYIHR 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            RLN+D GW+ +KVILSDANVPGEGEHKIMS+IR  RN + ++PNTRHCLYGL        
Sbjct: 181  RLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGNRNLDGFNPNTRHCLYGL-------- 232

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES-KIEKEANGSFARTP 1023
                         V+    + +KCF+CGQ+GH A  C+GK KR++ + +++ +    + P
Sbjct: 233  -------------VVFTPGQQDKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDEIVPKKP 279

Query: 1024 YQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGAI 1203
            YQFLNIWTLREYLE + ++PNP FE D ER++DDF+F+CFFVGNDFLPHMPTLEIREGAI
Sbjct: 280  YQFLNIWTLREYLEYEFRMPNPAFETDIERIIDDFIFMCFFVGNDFLPHMPTLEIREGAI 339

Query: 1204 NLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRS-FEQKRSSEIAK 1380
            NLLM VYKKEF  MGGYLT++    L+  EHF+Q VG+YED IF+KR+   Q+++  I +
Sbjct: 340  NLLMAVYKKEFPNMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIKR 399

Query: 1381 QRSSNKKAQDLKATVR--------------------------ESSNTVMPCKSXXXXXXX 1482
             ++  K+  DL   VR                             +T    ++       
Sbjct: 400  DKAQAKRGDDLDPHVRGDLIVPVARFQGSRLASGAVASPYEHNGRSTEKGSQAKKARVSS 459

Query: 1483 XXXXXXSAAVEDRASAEVE-----EDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWK 1647
                  +A VE   S E +     EDLK  +K+ALR+K DL +S   EEDK+KLG+ GW+
Sbjct: 460  SDSSLSAAVVEAEISVEAQARENKEDLKSMLKVALRDKSDLFNSENPEEDKIKLGEPGWR 519

Query: 1648 ERYYAEKFQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDF 1827
            ERYY +KF A T E+ E+IR D+V KYTEGLCWVM YYY GV SW WFYPYHYAPFASD 
Sbjct: 520  ERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 579

Query: 1828 TGVSKLKITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEID 2007
             G+ +L ITF LG PFKPF+QL+GV PAAS+ ALPV+YR LM DP+SP+IDFYP DFE+D
Sbjct: 580  KGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDPSSPIIDFYPIDFEVD 639

Query: 2008 LNGKRFAWQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDI 2187
            +NGKRF+WQG+AKLPFIDE RLL  +K VE +LT  E  RNST +++LFV   H ++  I
Sbjct: 640  MNGKRFSWQGIAKLPFIDEARLLSEIKKVEHTLTPEEARRNSTMYNMLFVNGAHPISPYI 699

Query: 2188 YNLYKKYANLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIIN 2367
            Y+L  K+ +L   +R +++E +NP++S G+NGY+S C G  D  PP F SP++ +EDI++
Sbjct: 700  YSLSSKFGHLPDNERNEIKEELNPEASGGMNGYISLCGG--DPSPPVFRSPVDGLEDIMD 757

Query: 2368 NSVLSVIFRLGEGCSHIPRPLEGVVMPKQTVYPGHMKPTSI-WHDEGGQKERIQNRAPV- 2541
            N V+  I++L +   HI RP  GV++PK+ V  G +KP  + WH++ G++    NR    
Sbjct: 758  NQVICSIYKLPDPHKHIARPPPGVIIPKKIVEAGDLKPPPVLWHEDNGRRPYDNNRKHCD 817

Query: 2542 -------KGSLQGPSLAEAALRLVNNCLQGK----------FDSFLKGRDMVSEAKPKK- 2667
                    GS+QG  L EAA RLV N L  +          + + + G        P + 
Sbjct: 818  NSSRQNPAGSIQGRQLGEAAHRLVANSLNVRGGGQYPPARPYQTIMNGMQHYPNGMPPRM 877

Query: 2668 -RPAGPVGYEKGFVNQGSEQKSSGKKANENGSKKKFVKKADGSGNKMPDNSGSNKRKRIK 2844
             +PAG  G+     N  + Q      A    S  ++ +  D  G + P    S+   R  
Sbjct: 878  EQPAGRSGWHVPSDNLPNGQ----APAYAQPSGHQYTR--DNRGRQQPYARDSHSDSRGA 931

Query: 2845 QRMKNKISETNNQLSELHQTTEMPHISRLHQPAQLHN--ISELQQMAEVRYLSELHAIRQ 3018
             R  +   + ++     H         R  QP        + + Q A      +      
Sbjct: 932  GRHPSGYHQNSSNAYSSHTAPPSSGFGRYGQPPSYAGGYAAGVYQPAPYAGAQQWQQQPP 991

Query: 3019 HSSFLAGHVP 3048
            HSS+  G  P
Sbjct: 992  HSSYSGGGAP 1001


>ref|XP_006417024.1| hypothetical protein EUTSA_v10009553mg, partial [Eutrema salsugineum]
            gi|557094795|gb|ESQ35377.1| hypothetical protein
            EUTSA_v10009553mg, partial [Eutrema salsugineum]
          Length = 902

 Score =  915 bits (2365), Expect = 0.0
 Identities = 472/861 (54%), Positives = 588/861 (68%), Gaps = 30/861 (3%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTING----VEIPLDSSKPNPNNMEFDNLYLDMN 294
            MGVPSFYRWL ++YPLI+ D +EEE   I G    V + +D+SKPNPN +E+DNLYLDMN
Sbjct: 1    MGVPSFYRWLIERYPLILQDVIEEEPLEIGGGGGVVTVSVDTSKPNPNGVEYDNLYLDMN 60

Query: 295  GIIHPCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRS 474
            GIIHPCFHPEDRPSP T+ +VF+ MFDYIDR+F +VRPRKLLY+AIDGVAPRAKMNQQRS
Sbjct: 61   GIIHPCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYLAIDGVAPRAKMNQQRS 120

Query: 475  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQY 654
                                          PPKV+SQV DSNVITPGT FM TLS+ LQY
Sbjct: 121  RRFRAAKDAAEAAAEEERLRQEFASEGKRLPPKVDSQVFDSNVITPGTHFMSTLSIALQY 180

Query: 655  YIHLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADL 834
            YIH+RLN D GW+ +KVILSDANVPGEGEHKIMS+IR+Q+N   Y+PNT HCLYGLDADL
Sbjct: 181  YIHVRLNSDPGWKKIKVILSDANVPGEGEHKIMSYIRLQKNHPGYNPNTCHCLYGLDADL 240

Query: 835  IMLGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES--KIEKEANGS 1008
            IML LATHE+H SILREV+    + +KCF+CGQIGH+A +C+GK KR++    +      
Sbjct: 241  IMLALATHEIHISILREVVFTPGQQDKCFLCGQIGHRAADCEGKVKRKAGEMFDNTETDV 300

Query: 1009 FARTPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEI 1188
             A+ PYQF+NIWTLREYLE DM+IPN   +   +R++DDF+FICFFVGNDFLPHMPTLEI
Sbjct: 301  VAKKPYQFVNIWTLREYLEYDMQIPNSRLQKCLDRIIDDFIFICFFVGNDFLPHMPTLEI 360

Query: 1189 REGAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSS 1368
            REGAI LLM+VYKKEF ++  YL+N S+++L N EHF+Q VG +E++IF++R+   +R S
Sbjct: 361  REGAIELLMSVYKKEFGSIASYLSNGSKLNLKNVEHFIQAVGLFENNIFQRRAQTYQRQS 420

Query: 1369 EIAKQRSSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXS------AAVEDRASA 1530
            E   +  +    +D    V +  N V    S             S        VE   S 
Sbjct: 421  ERFSRDRARASRKDDDGQVVQLENLVGESDSLHALPPRKCLRLSSDDSIGVVKVETENSI 480

Query: 1531 EVEE-----DLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQAHTDEER 1695
            + EE     DLKFK+K  +REK D  S+G  EEDKV+LG  GW+ERYY EKF A + EE 
Sbjct: 481  KEEELDNSEDLKFKLKKLMREKFDEFSTGKGEEDKVRLGVQGWRERYYEEKFTAKSVEEM 540

Query: 1696 EKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLGKPF 1875
            E+IR D+V KYTEGLCW+M YYY+GV SWNWFYPYHYAPFASD   + KL I F LG PF
Sbjct: 541  EQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKFLDKLDIKFELGAPF 600

Query: 1876 KPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAKLPF 2055
            KPFNQLL VLP+ASA ALP  +R LM DP+SP+ DFYPSDFEID+NGKR++WQG+AKLPF
Sbjct: 601  KPFNQLLAVLPSASAHALPECFRTLMTDPDSPIADFYPSDFEIDMNGKRYSWQGIAKLPF 660

Query: 2056 IDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQKKRA 2235
            I+E RLL A   VE SLT  E  RNS   D+LFV + H LA+ I +L  +   LS ++R 
Sbjct: 661  IEERRLLAAAAQVEHSLTNEEIRRNSVLSDMLFVVAPHPLAELIRSLNSRTIKLSTEERG 720

Query: 2236 KLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVIFRLGEGC-- 2409
             + E ++P  SEG+NGY++ C G  D+ PP F SPI  MEDI+ N V+  I++L +    
Sbjct: 721  TITETVDPGLSEGMNGYLASCGG--DSQPPCFRSPIEGMEDILANQVICAIYKLPDDVRG 778

Query: 2410 SHIPRPLEGVVMPKQTVYPGHMK-PTSIWHDEGGQKERIQNRAPVK----------GSLQ 2556
            S+  R   GVV+PK+TV    +K   ++WH++G ++     RAP K          GS+ 
Sbjct: 779  SNAARLPPGVVLPKKTVQLVDLKGGANLWHEDGDRR-----RAPAKIIKIKRYNPQGSIS 833

Query: 2557 GPSLAEAALRLVNNCLQGKFD 2619
            G  L +AA RLV   +  + D
Sbjct: 834  GDRLGKAAHRLVLQTINSQPD 854


>ref|XP_004301701.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fragaria vesca subsp. vesca]
          Length = 782

 Score =  907 bits (2344), Expect = 0.0
 Identities = 456/773 (58%), Positives = 555/773 (71%), Gaps = 22/773 (2%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVP+FYRWLA+KY L++VD VEEE   I+ V IP+D+SKPNPN +EFDNLYLDMN IIH
Sbjct: 1    MGVPAFYRWLAEKYQLVVVDVVEEEPIVIDDVSIPVDTSKPNPNGLEFDNLYLDMNAIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PCFHPEDRPSP T+++VF+ MF+YIDR+F +VRPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFDEVFQCMFEYIDRLFGMVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                      PPK+ESQ  DSNVITP T FM  LSV LQYYIHL
Sbjct: 121  AAKDVADAAVEEERLREEFEAEGRKLPPKLESQTFDSNVITPRTPFMAILSVALQYYIHL 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            RLN+D GWRNVKVIL DAN PGEGEHKIMS+IR+QRN   YDPNTRHCLYGLDADLIML 
Sbjct: 181  RLNNDPGWRNVKVILFDANSPGEGEHKIMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 240

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES----KIEKEANGS-- 1008
            LATHEVHFSILREV+   ++ +KC + GQ+GH A +C GK KR+      ++++  G+  
Sbjct: 241  LATHEVHFSILREVVYTAQQ-DKCLLYGQMGHLAADCQGKAKRKDVDMLDVDQKGTGAEV 299

Query: 1009 FARTPYQFLNIWTLREYLELDMK-IPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLE 1185
             A+ PYQFLNIWTLREYL+ +M+ IPN PFEID ER++DDF+FICFFVGNDFLPHMPTLE
Sbjct: 300  VAKKPYQFLNIWTLREYLDCEMRNIPNSPFEIDLERIIDDFIFICFFVGNDFLPHMPTLE 359

Query: 1186 IREGAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRS---FEQ 1356
            IREGAINLLM VYKKEF+A+GGYLT+SS+++LS  EHF+Q VG +ED IF+KR+     Q
Sbjct: 360  IREGAINLLMAVYKKEFHALGGYLTDSSKLNLSRVEHFIQAVGCFEDKIFQKRAQLHLRQ 419

Query: 1357 KRSSEIAKQRSSNKKAQDLKATVR------ESSNTVMPCKSXXXXXXXXXXXXXSAAVED 1518
             +  + AK++    +   L A  R       S  +  P +                  E+
Sbjct: 420  AQRIKRAKEQVPQVQPDSLVAVNRFQGSRLASGPSSAPYQQYTRLSEASSIGAAIVEAEN 479

Query: 1519 RASAEVEE-----DLKFKIKMALREKEDLMSSGG-MEEDKVKLGDAGWKERYYAEKFQAH 1680
             ++ +VEE     DLK K+K  LREK D  +S    EEDKVKLG  GWK+RYY EKF A 
Sbjct: 480  SSTPDVEEHKNKEDLKAKLKEVLREKSDAFNSKSPQEEDKVKLGAPGWKDRYYEEKFSAK 539

Query: 1681 TDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFS 1860
            T EERE + +D++ +YTEGLCWVM YYY GV SW WFYPYHYAPFASD   + +L I+F 
Sbjct: 540  TQEEREAVWKDVILRYTEGLCWVMNYYYEGVCSWEWFYPYHYAPFASDLKDIGQLNISFH 599

Query: 1861 LGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGV 2040
            LG PFKPF+QLLGV PAASA ALP  Y+ LM+DPNSP+IDFYP+DFE+D+NGKR+AWQG+
Sbjct: 600  LGTPFKPFSQLLGVFPAASAHALPENYKKLMIDPNSPIIDFYPTDFEVDMNGKRYAWQGI 659

Query: 2041 AKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLS 2220
            AKLPFID+ RLL  V  +E +LTE E  RNS  F++LFV S H L+  IY L      L+
Sbjct: 660  AKLPFIDQDRLLSEVAKIEHTLTEEETRRNSMMFEMLFVSSSHPLSVCIYFLDDCSRQLT 719

Query: 2221 QKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVL 2379
             K R + ++ I+PK SEG+NGY+S C G   +CPP F SP+  MEDI++N V+
Sbjct: 720  DKDRVEAKQQIDPKYSEGMNGYLSSCAG--QSCPPIFRSPVKYMEDIMDNQVI 770


>ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
            gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3'
            exoribonuclease 2; AltName: Full=Protein EXORIBONUCLEASE
            2 gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis
            thaliana] gi|51970342|dbj|BAD43863.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2
            [Arabidopsis thaliana] gi|332007441|gb|AED94824.1| 5'-3'
            exoribonuclease 2 [Arabidopsis thaliana]
          Length = 1012

 Score =  896 bits (2315), Expect = 0.0
 Identities = 485/1012 (47%), Positives = 631/1012 (62%), Gaps = 61/1012 (6%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTING--VEIPLDSSKPNPNNMEFDNLYLDMNGI 300
            MGVPSFYRWL Q+YPL I + +EEE   +NG  V IP+DSSKPNPN  E+DNLYLDMNGI
Sbjct: 1    MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 301  IHPCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXX 480
            IHPCFHPED+PSP T+ +VF+ MFDYIDR+F +VRPRKLL+MAIDGVAPRAKMNQQR+  
Sbjct: 61   IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYI 660
                                        PPKV+SQV DSNVITPGTEFM TLS  L+YYI
Sbjct: 121  FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 661  HLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIM 840
            H+RLN D GW+N+KVILSDANVPGEGEHKIMS+IR  +N   Y+PNT HCLYGLDADLIM
Sbjct: 181  HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 841  LGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES--KIEKEANGSFA 1014
            L LATHE+HFSILREV+    E  KCF+CGQ GH+A +C+GK KR++   ++        
Sbjct: 241  LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300

Query: 1015 RTPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIRE 1194
            + PY+F+NIW LREYLE DM+IP     +D  RL+DDF+FICFFVGNDFLPHMPTLEIRE
Sbjct: 301  KKPYEFVNIWILREYLEHDMQIPGAKKNLD--RLIDDFIFICFFVGNDFLPHMPTLEIRE 358

Query: 1195 GAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEI 1374
            GAI LLM+VYK +F +   YLT+SS+++L N E F++ VG YE+ IF+KR+  Q+R SE 
Sbjct: 359  GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418

Query: 1375 AKQRSSNKKAQD-----LKATVRESSNTVM--------------PCKSXXXXXXXXXXXX 1497
             ++  +  KA+D      +A+ + S   V               P +             
Sbjct: 419  FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478

Query: 1498 XSAAVEDRASAEV---EEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEK 1668
             +   E+   AE    EEDLKFK+K  LR+K D   SG  E+DKVKL   GW+ERYY EK
Sbjct: 479  ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEK 538

Query: 1669 FQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLK 1848
            F A + EE E+IR D+V KYTEGLCW+M YYY+GV SWNWFYPYHYAPFASD  G+ KL 
Sbjct: 539  FAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLD 598

Query: 1849 ITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFA 2028
            I F LG PFKPFNQLL VLP+ASA ALP  YR+LM +P+SP+ DFYP+DFEID+NGKR++
Sbjct: 599  IKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYS 658

Query: 2029 WQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKY 2208
            WQG++KLPF++E RLL+A   VE SLT  E  RNS  FD+LFV + H L + I +L  + 
Sbjct: 659  WQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRT 718

Query: 2209 ANLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVI 2388
             NLS ++RA + E I+P  S+G+NGY++ C G  D+ P  F S +  MED++ N V+  I
Sbjct: 719  NNLSNEERATIIEKIDPGLSDGMNGYIASCGG--DSQPSCFCSTVEGMEDVLTNQVICAI 776

Query: 2389 FRLGEGC--SHIPRPLEGVVMPKQTVYPGHMKPTS-IWHDEGGQKE------RIQNRAPV 2541
            ++L E    S I   +  + +PK+T+    +K    +WH++G ++       +I+   P 
Sbjct: 777  YKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHEDGDKRRAPPKVIKIKRYNP- 835

Query: 2542 KGSLQGPSLAEAALRLVNNCLQGKFD--------SFLKGRDMVSEAKPKKRPA------- 2676
            +GS+ G  L +A+ RLV   +  + D        +        +E  PKK P        
Sbjct: 836  EGSISGGRLGKASHRLVLQTINAQPDYMNINSEPALCPNTVFQNERVPKKIPTFKDNGIQ 895

Query: 2677 --GPVGYEKGFVNQGSEQKSSGKKANENGSKKKFVKKADGS---------GNKMPDNSGS 2823
               P   +       S Q+    K +E    ++  KK   S           K P    +
Sbjct: 896  WISPPPSQITPKKMNSPQRQKAWKKDETPQSREKSKKLKSSLKVNPLKMKKTKSPQREFT 955

Query: 2824 NKRKRIKQRMKNKISETNNQLSELHQTTEMPHISRLHQPAQLHNISELQQMA 2979
             ++K+     + K+++   Q+  +    E   I +  +   L   ++  Q A
Sbjct: 956  REKKKENITPQRKLTKAQRQVKHIRMMEEAKMIKQRKKEKYLRKKAKYAQGA 1007


>ref|XP_006279471.1| hypothetical protein CARUB_v10025807mg [Capsella rubella]
            gi|482548175|gb|EOA12369.1| hypothetical protein
            CARUB_v10025807mg [Capsella rubella]
          Length = 1006

 Score =  894 bits (2311), Expect = 0.0
 Identities = 451/855 (52%), Positives = 586/855 (68%), Gaps = 24/855 (2%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTING-VEIPLDSSKPNPNNMEFDNLYLDMNGII 303
            MGVPSFY+WL ++YPLI+ + +EEE   +NG V IP+D+SKPNPN  E+DNLYLDMNGII
Sbjct: 1    MGVPSFYKWLIERYPLILQEVIEEEPLEVNGGVTIPIDTSKPNPNGYEYDNLYLDMNGII 60

Query: 304  HPCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXX 483
            HPCFHPED+PSP T+ +VF+ MFDYIDR+F +VRPRKLL+MAIDGVAPRAKMNQQR+   
Sbjct: 61   HPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRF 120

Query: 484  XXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIH 663
                                       PPKV+SQV DSNVITPGTEFM TLS  L+YYIH
Sbjct: 121  RAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIH 180

Query: 664  LRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIML 843
            +RLN D GW+N+KVILSDANVPGEGEHKIMS+IR  +N   Y+PNT HCLYGLDADLIML
Sbjct: 181  VRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIML 240

Query: 844  GLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES--KIEKEANGSFAR 1017
             LATHE+HFSILREV+    + ++CF+CGQ+GH+A +C GK KR++   ++        +
Sbjct: 241  SLATHEIHFSILREVVFFPGDQDRCFLCGQMGHRAADCVGKAKRKAGEMLDNTETDVVKK 300

Query: 1018 TPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREG 1197
             PY+F+NIW LREYL+ DM+ P+   +   +RL+DDF+FICFFVGNDFLPHMPTLEIREG
Sbjct: 301  KPYEFVNIWILREYLKHDMQKPSKRSKKPLDRLIDDFIFICFFVGNDFLPHMPTLEIREG 360

Query: 1198 AINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSE-- 1371
            AI LLM+VY+  F +   +LT++S+++LSN E F+Q VG YE+ IF KR+   +R +E  
Sbjct: 361  AIELLMSVYRSHFGSAKRFLTDASKLNLSNVERFIQAVGIYENQIFLKRAQIHQRQAERF 420

Query: 1372 --------IAKQRSSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSAAVEDRAS 1527
                        R  + K+  L      S +   P                +   E+R  
Sbjct: 421  CRDKARDSAQASRQFSGKSVQLDCLDEVSDSLHSPPNKYLRLSLDDNIGVANVETENRIK 480

Query: 1528 AEV---EEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQAHTDEERE 1698
             E     EDLKFK+K  LR+K DL SSG  E+DKVKLG++GW+ERYY EKF A + EE E
Sbjct: 481  TEELDNREDLKFKLKKLLRDKGDLFSSGNGEQDKVKLGESGWRERYYEEKFTAKSVEEME 540

Query: 1699 KIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLGKPFK 1878
            +IR+D+V KY EGLCW+M YYY+GV SWNWFYPYHYAPFASD  G+ KL I F LG PFK
Sbjct: 541  QIRKDVVLKYIEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLDKLDIKFELGSPFK 600

Query: 1879 PFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAKLPFI 2058
            PFNQL+ VLP+ASA ALP  YR LM DP+SP+ DFYP+DFE+D+NGKR++WQG+AKLPF+
Sbjct: 601  PFNQLMAVLPSASAHALPECYRTLMTDPDSPIADFYPADFEVDMNGKRYSWQGIAKLPFV 660

Query: 2059 DETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQKKRAK 2238
            +E RLL+ V  VE SLT+ E  RNS  FD+LFV + H LA+ I +L  +  NLS ++RA 
Sbjct: 661  EEKRLLETVALVEKSLTDEEIRRNSVLFDMLFVVASHPLAELISSLNSRTNNLSNEERAT 720

Query: 2239 LREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVIFRLGEGC--S 2412
            + E I+P  S+G+NGY++      D+ PP F+SP+  M+D++ N V+S I++L E    +
Sbjct: 721  IMEKIDPGLSDGMNGYIASF--GKDSQPPCFSSPVEGMDDVLTNQVISAIYKLPEDIRGN 778

Query: 2413 HIPRPLEGVVMPKQTVYPGHMKPTS-IWHDEGGQKER-----IQNRAPVKGSLQGPSLAE 2574
             I   +  +V+PK+T+    +K    +WH++G ++         NR   +GS+ G  L +
Sbjct: 779  KITHKIPKLVIPKKTINLVDLKSEGLLWHEDGDRRRAPAKIIKTNRYNPEGSISGDRLGK 838

Query: 2575 AALRLVNNCLQGKFD 2619
            AA +LV   +  + D
Sbjct: 839  AAHKLVLQTINAQPD 853


>dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
          Length = 1012

 Score =  893 bits (2307), Expect = 0.0
 Identities = 484/1012 (47%), Positives = 630/1012 (62%), Gaps = 61/1012 (6%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTING--VEIPLDSSKPNPNNMEFDNLYLDMNGI 300
            MGVPSFYRWL Q+YPL I + +EEE   +NG  V IP+DSSKPNPN  E+DNLYLDMNGI
Sbjct: 1    MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 301  IHPCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXX 480
            IHPCFHPED+PSP T+ +VF+ MFDYIDR+F +VRPRKLL+MAIDGVAPRAKMNQQR+  
Sbjct: 61   IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYI 660
                                        PPKV+SQV DSNVITPGTEFM TLS  L+YYI
Sbjct: 121  FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 661  HLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIM 840
            H+RLN D GW+N+KVILSDANVPGEGEHKIMS+IR  +N   Y+PNT HCLYGLDADLIM
Sbjct: 181  HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 841  LGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES--KIEKEANGSFA 1014
            L LATHE+HFSILREV+    E  KCF+CGQ GH+A +C+GK KR++   ++        
Sbjct: 241  LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300

Query: 1015 RTPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIRE 1194
            + PY+F+NIW LREYLE DM+IP     +D  RL+DDF+FICFFVGNDFLPHMPTLEIRE
Sbjct: 301  KKPYEFVNIWILREYLEHDMQIPGAKKNLD--RLIDDFIFICFFVGNDFLPHMPTLEIRE 358

Query: 1195 GAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEI 1374
            GAI LLM+VYK +F +   YLT+SS+++L N E F++ VG YE+ IF+KR+  Q+  SE 
Sbjct: 359  GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNDERFIKAVGMYENQIFQKRAQVQQSQSER 418

Query: 1375 AKQRSSNKKAQD-----LKATVRESSNTVM--------------PCKSXXXXXXXXXXXX 1497
             ++  +  KA+D      +A+ + S   V               P +             
Sbjct: 419  FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478

Query: 1498 XSAAVEDRASAEV---EEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEK 1668
             +   E+   AE    EEDLKFK+K  LR+K D   SG  E+DKVKL   GW+ERYY EK
Sbjct: 479  ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEK 538

Query: 1669 FQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLK 1848
            F A + EE E+IR D+V KYTEGLCW+M YYY+GV SWNWFYPYHYAPFASD  G+ KL 
Sbjct: 539  FAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLD 598

Query: 1849 ITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFA 2028
            I F LG PFKPFNQLL VLP+ASA ALP  YR+LM +P+SP+ DFYP+DFEID+NGKR++
Sbjct: 599  IKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYS 658

Query: 2029 WQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKY 2208
            WQG++KLPF++E RLL+A   VE SLT  E  RNS  FD+LFV + H L + I +L  + 
Sbjct: 659  WQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRT 718

Query: 2209 ANLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVI 2388
             NLS ++RA + E I+P  S+G+NGY++ C G  D+ P  F S +  MED++ N V+  I
Sbjct: 719  NNLSNEERATIIEKIDPGLSDGMNGYIASCGG--DSQPSCFCSTVEGMEDVLTNQVICAI 776

Query: 2389 FRLGEGC--SHIPRPLEGVVMPKQTVYPGHMKPTS-IWHDEGGQKE------RIQNRAPV 2541
            ++L E    S I   +  + +PK+T+    +K    +WH++G ++       +I+   P 
Sbjct: 777  YKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHEDGDKRRAPPKVIKIKRYNP- 835

Query: 2542 KGSLQGPSLAEAALRLVNNCLQGKFD--------SFLKGRDMVSEAKPKKRPA------- 2676
            +GS+ G  L +A+ RLV   +  + D        +        +E  PKK P        
Sbjct: 836  EGSISGGRLGKASHRLVLQTINAQPDYMNINSEPALCPNTVFQNERVPKKIPTFKDNGIQ 895

Query: 2677 --GPVGYEKGFVNQGSEQKSSGKKANENGSKKKFVKKADGS---------GNKMPDNSGS 2823
               P   +       S Q+    K +E    ++  KK   S           K P    +
Sbjct: 896  WISPPPSQITPKKMNSPQRQKAWKKDETPQSREKSKKLKSSLKVNPLKMKKTKSPQREFT 955

Query: 2824 NKRKRIKQRMKNKISETNNQLSELHQTTEMPHISRLHQPAQLHNISELQQMA 2979
             ++K+     + K+++   Q+  +    E   I +  +   L   ++  Q A
Sbjct: 956  REKKKENITPQRKLTKAQRQVKHIRMMEEAKMIKQRKKEKYLRKKAKYAQGA 1007


>ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
            gi|332007442|gb|AED94825.1| 5'-3' exoribonuclease 2
            [Arabidopsis thaliana]
          Length = 1023

 Score =  889 bits (2296), Expect = 0.0
 Identities = 486/1023 (47%), Positives = 631/1023 (61%), Gaps = 72/1023 (7%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTING--VEIPLDSSKPNPNNMEFDNLYLDMNGI 300
            MGVPSFYRWL Q+YPL I + +EEE   +NG  V IP+DSSKPNPN  E+DNLYLDMNGI
Sbjct: 1    MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 301  IHPCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXX 480
            IHPCFHPED+PSP T+ +VF+ MFDYIDR+F +VRPRKLL+MAIDGVAPRAKMNQQR+  
Sbjct: 61   IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYI 660
                                        PPKV+SQV DSNVITPGTEFM TLS  L+YYI
Sbjct: 121  FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 661  HLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIM 840
            H+RLN D GW+N+KVILSDANVPGEGEHKIMS+IR  +N   Y+PNT HCLYGLDADLIM
Sbjct: 181  HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 841  LGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES--KIEKEANGSFA 1014
            L LATHE+HFSILREV+    E  KCF+CGQ GH+A +C+GK KR++   ++        
Sbjct: 241  LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300

Query: 1015 RTPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIRE 1194
            + PY+F+NIW LREYLE DM+IP     +D  RL+DDF+FICFFVGNDFLPHMPTLEIRE
Sbjct: 301  KKPYEFVNIWILREYLEHDMQIPGAKKNLD--RLIDDFIFICFFVGNDFLPHMPTLEIRE 358

Query: 1195 GAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEI 1374
            GAI LLM+VYK +F +   YLT+SS+++L N E F++ VG YE+ IF+KR+  Q+R SE 
Sbjct: 359  GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418

Query: 1375 AKQRSSNKKAQD-----LKATVRESSNTVM--------------PCKSXXXXXXXXXXXX 1497
             ++  +  KA+D      +A+ + S   V               P +             
Sbjct: 419  FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478

Query: 1498 XSAAVEDRASAEV---EEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEK 1668
             +   E+   AE    EEDLKFK+K  LR+K D   SG  E+DKVKL   GW+ERYY EK
Sbjct: 479  ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEK 538

Query: 1669 FQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLK 1848
            F A + EE E+IR D+V KYTEGLCW+M YYY+GV SWNWFYPYHYAPFASD  G+ KL 
Sbjct: 539  FAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLD 598

Query: 1849 ITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFA 2028
            I F LG PFKPFNQLL VLP+ASA ALP  YR+LM +P+SP+ DFYP+DFEID+NGKR++
Sbjct: 599  IKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYS 658

Query: 2029 WQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKY 2208
            WQG++KLPF++E RLL+A   VE SLT  E  RNS  FD+LFV + H L + I +L  + 
Sbjct: 659  WQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRT 718

Query: 2209 ANLSQKKRAKLREVINPKSSE-----------GLNGYMSPCHGAIDACPPKFTSPINKME 2355
             NLS ++RA + E I+P  SE           G+NGY++ C G  D+ P  F S +  ME
Sbjct: 719  NNLSNEERATIIEKIDPGLSEHIQKFLDVCSDGMNGYIASCGG--DSQPSCFCSTVEGME 776

Query: 2356 DIINNSVLSVIFRLGEGC--SHIPRPLEGVVMPKQTVYPGHMKPTS-IWHDEGGQKE--- 2517
            D++ N V+  I++L E    S I   +  + +PK+T+    +K    +WH++G ++    
Sbjct: 777  DVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHEDGDKRRAPP 836

Query: 2518 ---RIQNRAPVKGSLQGPSLAEAALRLVNNCLQGKFD--------SFLKGRDMVSEAKPK 2664
               +I+   P +GS+ G  L +A+ RLV   +  + D        +        +E  PK
Sbjct: 837  KVIKIKRYNP-EGSISGGRLGKASHRLVLQTINAQPDYMNINSEPALCPNTVFQNERVPK 895

Query: 2665 KRPA---------GPVGYEKGFVNQGSEQKSSGKKANENGSKKKFVKKADGS-------- 2793
            K P           P   +       S Q+    K +E    ++  KK   S        
Sbjct: 896  KIPTFKDNGIQWISPPPSQITPKKMNSPQRQKAWKKDETPQSREKSKKLKSSLKVNPLKM 955

Query: 2794 -GNKMPDNSGSNKRKRIKQRMKNKISETNNQLSELHQTTEMPHISRLHQPAQLHNISELQ 2970
               K P    + ++K+     + K+++   Q+  +    E   I +  +   L   ++  
Sbjct: 956  KKTKSPQREFTREKKKENITPQRKLTKAQRQVKHIRMMEEAKMIKQRKKEKYLRKKAKYA 1015

Query: 2971 QMA 2979
            Q A
Sbjct: 1016 QGA 1018


>gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana] gi|20147139|gb|AAM10286.1|
            AT5g42540/K16E1_1 [Arabidopsis thaliana]
          Length = 813

 Score =  880 bits (2274), Expect = 0.0
 Identities = 447/806 (55%), Positives = 558/806 (69%), Gaps = 28/806 (3%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTING--VEIPLDSSKPNPNNMEFDNLYLDMNGI 300
            MGVPSFYRWL Q+YPL I + +EEE   +NG  V IP+DSSKPNPN  E+DNLYLDMNGI
Sbjct: 1    MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 301  IHPCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXX 480
            IHPCFHPED+PSP T+ +VF+ MFDYIDR+F +VRPRKLL+MAIDGVAPRAKMNQQR+  
Sbjct: 61   IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYI 660
                                        PPKV+SQV DSNVITPGTEFM TLS  L+YYI
Sbjct: 121  FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 661  HLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIM 840
            H+RLN D GW+N+KVILSDANVPGEGEHKIMS+IR  +N   Y+PNT HCLYGLDADLIM
Sbjct: 181  HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 841  LGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES--KIEKEANGSFA 1014
            L LATHE+HFSILREV+    E  KCF+CGQ GH+A +C+GK KR++   ++        
Sbjct: 241  LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300

Query: 1015 RTPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIRE 1194
            + PY+F+NIW LREYLE DM+IP     +D  RL+DDF+FICFFVGNDFLPHMPTLEIRE
Sbjct: 301  KKPYEFVNIWILREYLEHDMQIPGAKKNLD--RLIDDFIFICFFVGNDFLPHMPTLEIRE 358

Query: 1195 GAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEI 1374
            GAI LLM+VYK +F +   YLT+SS+++L N E F++ VG YE+ IF+KR+  Q+R SE 
Sbjct: 359  GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418

Query: 1375 AKQRSSNKKAQD-----LKATVRESSNTVM--------------PCKSXXXXXXXXXXXX 1497
             ++  +  KA+D      +A+ + S   V               P +             
Sbjct: 419  FRRDKARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGV 478

Query: 1498 XSAAVEDRASAEV---EEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEK 1668
             +   E+   AE    EEDLKFK+K  LR+K D   SG  E+DKVKL   GW+ERYY EK
Sbjct: 479  ANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEK 538

Query: 1669 FQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLK 1848
            F A + EE E+IR D+V KYTEGLCW+M YYY+GV SWNWFYPYHYAPFASD  G+ KL 
Sbjct: 539  FAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLD 598

Query: 1849 ITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFA 2028
            I F LG PFKPFNQLL VLP+ASA ALP  YR+LM +P+SP+ DFYP+DFEID+NGKR++
Sbjct: 599  IKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYS 658

Query: 2029 WQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKY 2208
            WQG++KLPF++E RLL+A   VE SLT  E  RNS  FD+LFV + H L + I +L  + 
Sbjct: 659  WQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRT 718

Query: 2209 ANLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVI 2388
             NLS ++RA + E I+P  S+G+NGY++ C G  D+ P  F S +  MED++ N V+  I
Sbjct: 719  NNLSNEERATIIEKIDPGLSDGMNGYIASCGG--DSQPSCFCSTVEGMEDVLTNQVICAI 776

Query: 2389 FRLGEGC--SHIPRPLEGVVMPKQTV 2460
            ++L E    S I   +  + +PK+T+
Sbjct: 777  YKLPEDIRGSEITHQIPRLAIPKKTI 802


>dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
          Length = 746

 Score =  829 bits (2141), Expect = 0.0
 Identities = 417/741 (56%), Positives = 514/741 (69%), Gaps = 30/741 (4%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTING--VEIPLDSSKPNPNNMEFDNLYLDMNGI 300
            MGVPSFYRWL Q+YPL I + +EEE   +NG  V IP+DSSKPNPN  E+DNLYLDMNGI
Sbjct: 1    MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 301  IHPCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXX 480
            IHPCFHPED+PSP T+ +VF+ MFDYIDR+F +VRPRKLL+MAIDGVAPRAKMNQQR+  
Sbjct: 61   IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYI 660
                                        PPKV+SQV DSNVITPGTEFM TLS  L+YYI
Sbjct: 121  FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180

Query: 661  HLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIM 840
            H+RLN D GW+N+KVILSDANVPGEGEHKIMS+IR  +N   Y+PNT HCLYGLDADLIM
Sbjct: 181  HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240

Query: 841  LGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRES--KIEKEANGSFA 1014
            L LATHE+HFSILREV    +E  KCF+CGQ GH+A +C+GK KR++   ++        
Sbjct: 241  LSLATHEIHFSILREVFFPGEEG-KCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 299

Query: 1015 RTPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIRE 1194
            + PY+F+NIW LREYLE DM+IP     +D  RL+DDF+FICFFVGNDFLPHMPTLEIRE
Sbjct: 300  KKPYEFVNIWILREYLEHDMQIPGAKKNLD--RLIDDFIFICFFVGNDFLPHMPTLEIRE 357

Query: 1195 GAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEI 1374
            GAI LLM+VYK +F +   YLT+SS+++L N E F++ VG YE+ IF+KR   ++   + 
Sbjct: 358  GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRRQSERFRRDK 417

Query: 1375 AKQRSSNKKAQDLKATVRESSNTVM--------------PCKSXXXXXXXXXXXXXSAAV 1512
            A+ ++ +    + +A+ + S   V               P +              +   
Sbjct: 418  ARDKARDNARDNAQASRQFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVET 477

Query: 1513 EDRASAEV------------EEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERY 1656
            E+   AE             EEDLKFK+K  LR+K D   SG  E+DKVKL   GW+ERY
Sbjct: 478  ENSLKAECTKVHSGFQELDNEEDLKFKLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERY 537

Query: 1657 YAEKFQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGV 1836
            Y EKF A + EE E+IR D+V KYTEGLCW+M YYY+GV SWNWFYPYHYAPFASD  G+
Sbjct: 538  YEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGL 597

Query: 1837 SKLKITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNG 2016
             KL I F LG PFKPFNQLL VLP+ASA ALP  YR+LM +P+SP+ DFYP+DFEID+NG
Sbjct: 598  EKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPIADFYPADFEIDMNG 657

Query: 2017 KRFAWQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNL 2196
            KR++WQG++KLPF++E RLL+A   VE SLT  E  RNS  FD+LFV + H L + I +L
Sbjct: 658  KRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLFVVASHPLGELIRSL 717

Query: 2197 YKKYANLSQKKRAKLREVINP 2259
              +  NLS ++RA + E I+P
Sbjct: 718  NSRTNNLSNEERATIIEKIDP 738


>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 834

 Score =  825 bits (2132), Expect = 0.0
 Identities = 421/792 (53%), Positives = 534/792 (67%), Gaps = 1/792 (0%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MG+P+FYRWLA +YPL +V+AVE+    +NGV + +D+++PNPN  EFDNLYLDMNGIIH
Sbjct: 1    MGIPAFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PCFHPE  P+P TY DVFK +F YIDRIF +VRPRKLLYMAIDGVAPRAKMNQQR+    
Sbjct: 61   PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                          +++  DSNVITPGTEFM  LS  L+YYIHL
Sbjct: 121  AAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHL 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            R+N D GWR +KVILSDANVPGEGEHKIMS+IR+QRN   +DPNTRHCLYGLDADLIML 
Sbjct: 181  RMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRESKIEKEANGSFARTPY 1026
            LATHE+HFSILRE +      +K     +      N  GK K+     ++     +R  +
Sbjct: 241  LATHEIHFSILREDVHKAYRKDKNNKPRK-DSLLVNKRGKSKQGEVGGEDIEDFISRQKF 299

Query: 1027 QFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGAIN 1206
            QFLNIWTLR+YL  DM IP+   + D ERL+DDFVF+C FVGNDFLPHMP+LEI EGAI+
Sbjct: 300  QFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAID 359

Query: 1207 LLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEIAKQR 1386
            LLMTVYKKEF  +GGYLTNSSEV+L   E F+QVVG++E++IF+KRS  QK+   +  Q 
Sbjct: 360  LLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRG-VRFQG 418

Query: 1387 SSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSAAVEDRASAEVEEDLKFKIKM 1566
            SSNKK      TV + S T  PC                +++E R +   ++     +K 
Sbjct: 419  SSNKK------TVSDYSTT--PCVEPQGMTGSS-----GSSLEPRKTPFCQDSKNSTVKE 465

Query: 1567 ALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQAHTDEEREKIREDIVSKYTEGLCW 1746
                   + +      DK+KLG+ GWKER+Y EKF+A T+++RE++R   V KY EG+CW
Sbjct: 466  IQCSTNCISTGANSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICW 525

Query: 1747 VMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLGKPFKPFNQLLGVLPAASAQA 1926
            VM YYY GV SW WFYPYHYAPFASD  G+ +L I F+LGKPFKPF+QL+GVLPAASA A
Sbjct: 526  VMHYYYQGVCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHA 585

Query: 1927 LPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAKLPFIDETRLLDAVKNVEGSL 2106
            LP+ YR LMMD  SP++DFYP+DFE+D+NGKR+ WQ + KLPFI E+RLL  +  VE +L
Sbjct: 586  LPLYYRKLMMDETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTL 645

Query: 2107 TEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQKKRAKLREVINPKSSEGLNGY 2286
            T++EKLRN    D LF++    LA  I++ YK+  +  +   AK++  I+PK S G+NGY
Sbjct: 646  TDKEKLRNRLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGY 705

Query: 2287 MSPCHGAIDACPPKFTSPINKMEDIINNSVLSVIFRLGEGCSHIPRPLEGVVMPKQTVYP 2466
            M      +   P +F SPI  ME I  N V+S+ ++      HIPRPLEGV++P +TV  
Sbjct: 706  MYISDRPV--WPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIK 763

Query: 2467 GH-MKPTSIWHD 2499
             H ++P  +WH+
Sbjct: 764  PHLLRPPVLWHE 775


>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  790 bits (2041), Expect = 0.0
 Identities = 412/792 (52%), Positives = 519/792 (65%), Gaps = 1/792 (0%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MG+P+FYRWLA +YPL +V+AVE+                       FDNLYLDMNGIIH
Sbjct: 1    MGIPAFYRWLADRYPLAVVNAVEDRPAV-------------------FDNLYLDMNGIIH 41

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PCFHPE  P+P TY DVFK +F YIDRIF +VRPRKLLYMAIDGVAPRAKMNQQR+    
Sbjct: 42   PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 101

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                          +++  DSNVITPGTEFM  LS  L+YYIHL
Sbjct: 102  AAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHL 161

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            R+N D GWR +KVILSDANVPGEGEHKIMS+IR+QRN   +DPNTRHCLYGLDADLIML 
Sbjct: 162  RMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 221

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRESKIEKEANGSFARTPY 1026
            LATHE+HFSILRE +      +K     +      N  GK K+     ++     +R  +
Sbjct: 222  LATHEIHFSILREDVHKAYRKDKNNKPRK-DSLLVNKRGKSKQGEVGGEDIEDFISRQKF 280

Query: 1027 QFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGAIN 1206
            QFLNIWTLR+YL  DM IP+   + D ERL+DDFVF+C FVGNDFLPHMP+LEI EGAI+
Sbjct: 281  QFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAID 340

Query: 1207 LLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEIAKQR 1386
            LLMTVYKKEF  +GGYLTNSSEV+L   E F+QVVG++E++IF+KRS  QK+   +  Q 
Sbjct: 341  LLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRG-VRFQG 399

Query: 1387 SSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSAAVEDRASAEVEEDLKFKIKM 1566
            SSNKK      TV + S T  PC                +++E R +   ++     +K 
Sbjct: 400  SSNKK------TVSDYSTT--PCVEPQGMTGSS-----GSSLEPRKTPFCQDSKNSTVKE 446

Query: 1567 ALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQAHTDEEREKIREDIVSKYTEGLCW 1746
                   + +      DK+KLG+ GWKER+Y EKF+A T+++RE++R   V KY EG+CW
Sbjct: 447  IQCSTNCISTGANSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICW 506

Query: 1747 VMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLGKPFKPFNQLLGVLPAASAQA 1926
            VM YYY GV SW WFYPYHYAPFASD  G+ +L I F+LGKPFKPF+QL+GVLPAASA A
Sbjct: 507  VMHYYYQGVCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHA 566

Query: 1927 LPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAKLPFIDETRLLDAVKNVEGSL 2106
            LP+ YR LMMD  SP++DFYP+DFE+D+NGKR+ WQ + KLPFI E+RLL  +  VE +L
Sbjct: 567  LPLYYRKLMMDETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTL 626

Query: 2107 TEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQKKRAKLREVINPKSSEGLNGY 2286
            T++EKLRN    D LF++    LA  I++ YK+  +  +   AK++  I+PK S G+NGY
Sbjct: 627  TDKEKLRNRLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGY 686

Query: 2287 MSPCHGAIDACPPKFTSPINKMEDIINNSVLSVIFRLGEGCSHIPRPLEGVVMPKQTVYP 2466
            M      +   P +F SPI  ME I  N V+S+ ++      HIPRPLEGV++P +TV  
Sbjct: 687  MYISDRPV--WPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIK 744

Query: 2467 GH-MKPTSIWHD 2499
             H ++P  +WH+
Sbjct: 745  PHLLRPPVLWHE 756


>ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 909

 Score =  759 bits (1961), Expect = 0.0
 Identities = 392/699 (56%), Positives = 480/699 (68%), Gaps = 33/699 (4%)
 Frame = +1

Query: 625  METLSVVLQYYIHLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTR 804
            M  LSV LQYYIHLRLN+D GW+N+KVILSDANVPGEGEHKI S+IR+QRN + YDPNT+
Sbjct: 1    MAVLSVALQYYIHLRLNNDPGWKNIKVILSDANVPGEGEHKITSYIRLQRNLKGYDPNTQ 60

Query: 805  HCLYGLDADLIMLGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRESK 984
            HCLYGLDADLIMLGLATHE+HFSILREV+    + +KCF+CGQ+GH A  C+GK KR++ 
Sbjct: 61   HCLYGLDADLIMLGLATHEIHFSILREVVFTPGQ-DKCFLCGQMGHMAAECEGKAKRKTD 119

Query: 985  IEKEANGSFARTPYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFL 1164
             EK  +   A+ P+QFLNIWTLREYLE +M+IPN PFEIDFE ++DDF+FICFFVGNDFL
Sbjct: 120  DEK-GDAIVAKLPFQFLNIWTLREYLEYEMRIPNSPFEIDFECILDDFIFICFFVGNDFL 178

Query: 1165 PHMPTLEIREGAINLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKR 1344
            PHMPTL+IREGAI+ LMTVYK EF  +GGYLTN S+ +LS  EHF+Q VG++ED IF+KR
Sbjct: 179  PHMPTLDIREGAIDSLMTVYKNEFTKLGGYLTNGSKPNLSRVEHFIQAVGSHEDEIFQKR 238

Query: 1345 SFEQKRSSEIAKQRSSNKKAQDLKATVRESS-------------NTVMPC---------- 1455
            +   +R  E  K+R    +  D+   V+  S             + +MP           
Sbjct: 239  ARLHQRQVETIKRRKRQARGDDVGPQVQPESLAAISQFHGSRLASALMPSPFQQSGHNKE 298

Query: 1456 ---KSXXXXXXXXXXXXXSAAVEDRASAEV-----EEDLKFKIKMALREKEDLMSSGGME 1611
               K              +A VE   S E+     E++LK K+K  L +K D+ +S G  
Sbjct: 299  VLEKPSKVSRLSSGVTVVAAIVEAENSLEIDVQDNEDELKAKLKRILLDKSDVFNSKGGH 358

Query: 1612 EDKVKLGDAGWKERYYAEKFQAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWF 1791
            EDK+KLG+ GWKERYY EKF A T EE   IR+D+V KYTEGLCWVM YYY GV SW WF
Sbjct: 359  EDKIKLGEPGWKERYYEEKFSAKTPEELVAIRKDVVLKYTEGLCWVMHYYYEGVCSWQWF 418

Query: 1792 YPYHYAPFASDFTGVSKLKITFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSP 1971
            YPYHYAPFASD  G+S+L I F LG PFKPF+QL+GV PAAS+ ALP  YR LM DP+SP
Sbjct: 419  YPYHYAPFASDLKGLSELNINFELGAPFKPFDQLIGVFPAASSHALPETYRKLMTDPSSP 478

Query: 1972 VIDFYPSDFEIDLNGKRFAWQGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDIL 2151
            +IDFYP DFE+D+NGKRFAWQG+AKLPFIDETRLL AV+ +E  LT  EK RN+  FD+L
Sbjct: 479  IIDFYPIDFEVDMNGKRFAWQGIAKLPFIDETRLLAAVQKIENFLTPEEKRRNAIMFDML 538

Query: 2152 FVYSKHGLAQDIYNLYKKYANLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKF 2331
            FV S H L+  I  L  K  N S  +RA ++E INP  S G+NGY+S C G  + CPP F
Sbjct: 539  FVNSCHPLSACISTLDNKCRNTSNCERANVKEKINPIESGGMNGYISFCDG--EPCPPFF 596

Query: 2332 TSPINKMEDIINNSVLSVIFRLGEGCSHIPRPLEGVVMPKQTVYPGHMKPTSI-WHDEGG 2508
             SP+  MEDII+N V+  I+RL +   HI RPL GV  PK+TV    +KP  + WH++ G
Sbjct: 597  RSPVAGMEDIIDNHVICAIYRLPDAHEHINRPLHGVKFPKKTVAIEDLKPEPVLWHEDSG 656

Query: 2509 QKERIQNRAPVKGSLQGPSL-AEAALRLVNNCLQGKFDS 2622
            ++     R    G+     L  EAA RLV N LQ K D+
Sbjct: 657  RRYGESQRKKPSGTYSCRQLNEEAAHRLVVNSLQVKMDA 695


>gb|EXB91256.1| 5'-3' exoribonuclease 3 [Morus notabilis]
          Length = 1010

 Score =  710 bits (1832), Expect = 0.0
 Identities = 393/816 (48%), Positives = 504/816 (61%), Gaps = 21/816 (2%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVPSFYRWL  KYP ++ +A+EE        EI L++S PNPN +EFDNLYLDMNGIIH
Sbjct: 1    MGVPSFYRWLVDKYPKVVENAIEE-------TEISLNTSLPNPNGIEFDNLYLDMNGIIH 53

Query: 307  PCFHPE--DRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXX 480
            PCFHPE  D  +P T+E+VFKNMF+YIDR+F IVRPRKLLYMA+DGVAPRAKMNQQR+  
Sbjct: 54   PCFHPEEEDISTPSTFEEVFKNMFEYIDRLFNIVRPRKLLYMAVDGVAPRAKMNQQRARR 113

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVE-SQVHDSNVITPGTEFMETLSVVLQYY 657
                                         PK E S+V DSN+ITPGTEFM  LS  L+ Y
Sbjct: 114  FRTSKDKEIAEEEELKVRQQFEMEGKKVLPKEEESEVSDSNIITPGTEFMHKLSEALKSY 173

Query: 658  IHLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLI 837
            I LRL +D GWRN+KVILSDANVPGEGEHKIMSFIR+QR   +Y+ NTRHCLYGLDADLI
Sbjct: 174  ISLRLRNDLGWRNIKVILSDANVPGEGEHKIMSFIRLQRTLPSYNANTRHCLYGLDADLI 233

Query: 838  MLGLATHEVHFSILREVITDKKEAEKCF-ICGQIGHKATNCDGKRKRE------SKIEKE 996
            +L LATHEVHFSILRE +  +++  + F       H       ++ R          +K 
Sbjct: 234  LLSLATHEVHFSILRENVKVQEQNHRNFKSVRATSHSTAEFSPQKSRGWFNNVLDSADKC 293

Query: 997  ANGSFARTPYQFLNIWTLREYLELDMKIPNPP--FEIDFERLVDDFVFICFFVGNDFLPH 1170
               S  + PYQFL++W LREYLELDM+I +PP  F+ DFER+VDDF+F+CFFVGNDFLPH
Sbjct: 294  LAASVTKKPYQFLHVWILREYLELDMRIDDPPENFKYDFERIVDDFIFMCFFVGNDFLPH 353

Query: 1171 MPTLEIREGAINLLMTVYKKEFNAMGGYLTNSSEVH--------LSNAEHFLQVVGTYED 1326
             P+L I EGAI+LLMT+YK E   +GGYL + + V          S  E F+  VG +E+
Sbjct: 354  TPSLAIHEGAIDLLMTIYKNELKKIGGYLVDMNRVEDKKGGFIKPSRVERFILSVGAHEE 413

Query: 1327 SIFKKRSFEQKRSSEIAKQRSSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSA 1506
             IFKKRS  Q+R        +++++  +   +  E+S+                     A
Sbjct: 414  KIFKKRSEIQERKLRRLCLNNADQEDSNGSCSATETSSCAF-LDVQAQLNNSAIAPSGDA 472

Query: 1507 AVEDRASAEVEEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQAHTD 1686
            + +     +   DLK K++  LR K D++  GG   DKV+LG  G+KERYY +KF A + 
Sbjct: 473  SFDYHEMLKNTNDLKEKVRHNLRRKADML-KGGFGVDKVRLGSPGYKERYYKKKFSAESP 531

Query: 1687 EEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLG 1866
             E E IR+ +V KY+EGL WV+ YY++   SWNWFYPYHY PF SD  G+S++K+    G
Sbjct: 532  GEIESIRKRLVEKYSEGLLWVLLYYFSEPPSWNWFYPYHYGPFVSDLKGLSQVKLRLKKG 591

Query: 1867 KPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAK 2046
             PF PF+QLL VLP+ S  ALP  Y+ALM D +SP++DFYP+DFEID++GKRF+WQG+ K
Sbjct: 592  VPFNPFDQLLSVLPSRSGHALPKAYQALMND-DSPIVDFYPTDFEIDVDGKRFSWQGICK 650

Query: 2047 LPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQK 2226
            LPFIDE RLL     +E  L   E+ RNS K D L VYS H L   I ++ K+      K
Sbjct: 651  LPFIDEERLLSETTKLENDLGVEERERNSKKLDQLLVYSTHKLGSHILSVSKEQNQNVGK 710

Query: 2227 KRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVIFRLGEG 2406
            +   L        S+ + G +   H        + T    + ED   NSVL V +    G
Sbjct: 711  RGTSL--------SDEIGGVLWLHH--------EHTVVDKENED---NSVLCVYYE-PPG 750

Query: 2407 CS-HIPRPLEGVVMPKQTVYPGHMKPTSIWHDEGGQ 2511
            C  H+PR LEGV  P++T+    +K T +WH+  G+
Sbjct: 751  CGPHVPRLLEGVKCPEKTIREDDIKETQLWHEYQGK 786


>ref|XP_004308764.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fragaria vesca subsp. vesca]
          Length = 968

 Score =  700 bits (1806), Expect = 0.0
 Identities = 391/808 (48%), Positives = 500/808 (61%), Gaps = 17/808 (2%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVPSF+RWL  KYP ++V A+EE       ++  +D + PNPN +EFDNLYLDMNGIIH
Sbjct: 1    MGVPSFFRWLVNKYPKVVVKAIEE-------IDEFVDPTSPNPNGIEFDNLYLDMNGIIH 53

Query: 307  PCFHPEDRPS-PLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXX 483
            PCFHPE+    P TYEDVF N+F+YIDR+FRIVRPRKLLYMAIDGVAPRAKMNQQRS   
Sbjct: 54   PCFHPEEEDDVPRTYEDVFNNIFEYIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 113

Query: 484  XXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIH 663
                                         + ES++ DSN+ITPGT+FM  LS  LQ Y +
Sbjct: 114  KSAMDKNLAEAEEEKLRLHFEKEGKKILLEQESEISDSNIITPGTDFMYKLSKALQSYTN 173

Query: 664  LRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIML 843
            LRL+ D GW+++KVILSDANVPGEGEHK+MSFIR QR   +YDPNTRHCLYGLDADLIML
Sbjct: 174  LRLSQDPGWKDIKVILSDANVPGEGEHKVMSFIRHQRTVPSYDPNTRHCLYGLDADLIML 233

Query: 844  GLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRESKIEKEANGSFARTP 1023
             LATHEVHFSILRE +    + ++ +  GQ+    T    KRK              + P
Sbjct: 234  SLATHEVHFSILREDLL--LQNQQPYANGQL----TASSDKRK----------AYMMKKP 277

Query: 1024 YQFLNIWTLREYLELDMKIPNPP--FEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREG 1197
            YQFL+IW LREYLELDM+I +PP  F+ D ER++DDF+FICFF GNDFLPHMPTLEI EG
Sbjct: 278  YQFLHIWILREYLELDMQINDPPENFKFDLERIIDDFIFICFFAGNDFLPHMPTLEIHEG 337

Query: 1198 AINLLMTVYKKEFNAMGGYLTNSSEVH--------LSNAEHFLQVVGTYEDSIFKKRSFE 1353
            AI+LLM VYKKEF  +GGYL +   VH        LS  E F+ ++G YE+ IFKKRS  
Sbjct: 338  AIDLLMQVYKKEFKKIGGYLVDMIRVHDKKLGYIKLSRVEKFILLIGAYEEKIFKKRSDI 397

Query: 1354 QKRSSEIAKQRSSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSAAV--EDRAS 1527
            + R     K R        ++  +   S+T                   SA V  ++ +S
Sbjct: 398  RDR-----KLRGFCNNDDTIEEEIDAGSST-----------SNVKAIEGSAVVSADNLSS 441

Query: 1528 AEVEE---DLKFKIKMALREKEDLMSSGG-MEEDKVKLGDAGWKERYYAEKFQAHTDEER 1695
            +E+ E   + K K+K ++R K DL  +G     DKV+LG  G+KERYY  KF A T  E 
Sbjct: 442  SEIAENTKEYKQKLKASIRRKSDLFRNGDHFGTDKVRLGATGFKERYYKYKFSAETPGEI 501

Query: 1696 EKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLGKPF 1875
            E  R+++V  YTEGL WV+ YY++G  SW WFYP+HY PFASD  G++++K  F  G PF
Sbjct: 502  ECKRKEVVKCYTEGLLWVLLYYFSGPPSWKWFYPFHYGPFASDMKGLAQVKPQFEKGSPF 561

Query: 1876 KPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAKLPF 2055
            KP + L+ VLP  SA ALP  YRALMM+  S +I+FYPSDFE+D++GKRF WQG++KLPF
Sbjct: 562  KPIDTLMAVLPPRSAHALPEDYRALMMEDCSSIIEFYPSDFEVDMDGKRFTWQGISKLPF 621

Query: 2056 IDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQKKRA 2235
            IDE+RLL   + +E  L   E  RN+ K D LF+ S H +A  I +L     N S K   
Sbjct: 622  IDESRLLHETRKLEKELKGEEIERNAEKLDRLFIRSSHIMASQIVSL-TNGGNQSIK--- 677

Query: 2236 KLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVIFRLGEGCSH 2415
                 I+P  S G++ ++      +D    K     +  ED     VL  ++ L     H
Sbjct: 678  -----IDPNLSFGISDFIR----QLDDNDAKVKGDDSSEED----PVLCALYELPNTSLH 724

Query: 2416 IPRPLEGVVMPKQTVYPGHMKPTSIWHD 2499
            +PR L+G+ +P +T+    +  T +WH+
Sbjct: 725  MPRLLDGLQLPPKTINECELLETVLWHE 752


>ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
            gi|144578533|gb|ABO96597.1| predicted protein
            [Ostreococcus lucimarinus CCE9901]
          Length = 802

 Score =  684 bits (1766), Expect = 0.0
 Identities = 373/811 (45%), Positives = 494/811 (60%), Gaps = 26/811 (3%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVPSFYRW+AQKYP I+ D VE+E     G  + L+S++ NPN +EFDNLYLDMNGIIH
Sbjct: 1    MGVPSFYRWIAQKYPKIVADVVEDEPVDALGRRVELNSAEANPNGIEFDNLYLDMNGIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PCFHPEDRP+P T E+VF+ +FDYIDR+F ++RPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPAPTTEEEVFECIFDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                       PK ES V DSNVITPGT FM  LS  L+YY+H 
Sbjct: 121  SAQEAREKAEEEEKLREKLIREGVKVQPKQESGVFDSNVITPGTPFMGRLSEALKYYVHD 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            +LN+D GWR ++VI SDA+VPGEGEHK M +IR QR     +PNTRH +YGLDADLIML 
Sbjct: 181  KLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIMLA 240

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRESKIEKEANGSFARTPY 1026
            LATHE HF ILRE++  KK+ E     G          G  + + K+      + AR PY
Sbjct: 241  LATHEPHFWILREIVFQKKDNEAPQTLGL---------GTEETKKKV------AIARKPY 285

Query: 1027 QFLNIWTLREYLELDMKIPNP-PFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGAI 1203
            Q L++  LREYL LDM+   P PF++D ER+ DDF+F+CFFVGNDFLPH PTLEIREGAI
Sbjct: 286  QLLSVSVLREYLALDMRPVAPTPFKLDPERMFDDFIFMCFFVGNDFLPHSPTLEIREGAI 345

Query: 1204 NLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEIAKQ 1383
            +LLMT+Y+     +GGYL      +LS  E F+++V  +ED+IF+KR+ ++ R    + +
Sbjct: 346  DLLMTLYRNCLPTLGGYLCADGRPNLSIVEKFVRLVSEHEDAIFQKRAKKEARMR--SSR 403

Query: 1384 RSSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSA------------------- 1506
            +   +KA+D     R+ S T +P                +A                   
Sbjct: 404  QRDKQKAKDYYERQRKGSGTNVPQHRVLGGSRNASDRAPAAPTEQLVALGRGKPTPPPSA 463

Query: 1507 ---AVEDRASAE-VEEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQ 1674
               A E++++A+ + E LK + K A     D M     E D ++LG++GWK+RYY  K Q
Sbjct: 464  PKTAAENKSAADALRERLKTRGKRAAEATADAMGEREEETDNIRLGESGWKDRYYEAKMQ 523

Query: 1675 AHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKIT 1854
            A T + R++I   +V +Y  GL WV +YY+ G  SW+WFYPYHYAPFASD   +S +   
Sbjct: 524  A-TPQTRDEIIRGMVIEYVRGLIWVCRYYFEGCCSWSWFYPYHYAPFASDLYDLSTISTD 582

Query: 1855 FSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQ 2034
            F LGKPFKPF+QL+GVLPAAS+ ALP  +  LM D +SP+IDFYP DF +D+NGKRF WQ
Sbjct: 583  FDLGKPFKPFSQLMGVLPAASSHALPAAFAPLMSDKDSPIIDFYPEDFALDMNGKRFTWQ 642

Query: 2035 GVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYAN 2214
             VA LP+ID  RLL+  + +E +LT  EK RNS   + ++V + H LA       K++  
Sbjct: 643  AVALLPWIDANRLLEQTEMLEYTLTAEEKRRNSINEEEIYVNAAHPLA-------KQFLE 695

Query: 2215 LSQKKRAKLREVI--NPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVI 2388
            L +++   + + +  +PK S+G+N  +       DA P    SP++  +DI NN V+   
Sbjct: 696  LEEREDEDVEKTLKMDPKLSKGMNATLVSVKR--DAQPTMIPSPMSSRQDISNNKVVVAS 753

Query: 2389 FRLGEGCSHIPRPLEGVVMPKQTVYPGHMKP 2481
             RL       P  + G V+P   V    + P
Sbjct: 754  MRLPTDRFVPPVLMPGAVLPTPMVTEADLPP 784


>gb|ESW04477.1| hypothetical protein PHAVU_011G097800g [Phaseolus vulgaris]
          Length = 898

 Score =  681 bits (1757), Expect = 0.0
 Identities = 375/832 (45%), Positives = 500/832 (60%), Gaps = 30/832 (3%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVPSFYRWL  KYP ++ D               +D++  +PN +++DNLY+DMN IIH
Sbjct: 1    MGVPSFYRWLTNKYPKVVQD---------------VDAAMQDPNGVKYDNLYVDMNAIIH 45

Query: 307  PCFHPEDR----PSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRS 474
            PCFHP+D     P P T+EDVF+N+FDYIDR+   V+PR+LLYMAIDGVAPRAKMNQQRS
Sbjct: 46   PCFHPDDHNNNIPFPTTFEDVFRNVFDYIDRLVDTVKPRRLLYMAIDGVAPRAKMNQQRS 105

Query: 475  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQY 654
                                           PK E+++ DSN+ITPGTEFM  LS  L+ 
Sbjct: 106  RRFRAAKDNEIHEAEEERLRKQFEMEGKQVLPKQETELADSNIITPGTEFMHELSKALKS 165

Query: 655  YIHLRLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADL 834
            YI  R+  +S W+++ VILSDA+VPGEGEHKIMS+IR QR+ E YDPNT HCLYG DADL
Sbjct: 166  YISSRIICNSLWKDIMVILSDASVPGEGEHKIMSYIRKQRSLEEYDPNTSHCLYGSDADL 225

Query: 835  IMLGLATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDGKRKRESKIEKEANGSFA 1014
            IML +ATHE HFSILRE ++ ++  +                             +   A
Sbjct: 226  IMLAMATHEPHFSILREDVSVQQHQQ-----------------------------HPKVA 256

Query: 1015 RTPYQFLNIWTLREYLELDMKIPNPP--FEIDFERLVDDFVFICFFVGNDFLPHMPTLEI 1188
              P++FL+IW LREYLELDMKI NPP    I+ ER++DDF+F+CFF GNDFLPHMP+L+I
Sbjct: 257  SKPFKFLHIWLLREYLELDMKIENPPKTCSIELERIIDDFIFMCFFAGNDFLPHMPSLDI 316

Query: 1189 REGAINLLMTVYKKEFNAMGGYLTNSSEV--------HLSNAEHFLQVVGTYEDSIFKKR 1344
             EGAI+LLMTVYK+EFN +GGYL + S V         LS  E F+  VGTYE+ IFK+R
Sbjct: 317  HEGAIDLLMTVYKEEFNTLGGYLVDMSRVGEKNAAFMKLSRVEKFILKVGTYEEKIFKRR 376

Query: 1345 SFEQKR--------SSEIAKQRSSNKKAQDLKATVRESSNTVMPCKSXXXXXXXXXXXXX 1500
            S  ++R        + E  ++ ++ K   DL     ++S+  +  K              
Sbjct: 377  SEVRERKLKRLIQDNQEAKREETNGKYFSDLDN--EDTSDCTLLIKKAPDSKNSILVNNV 434

Query: 1501 SAAVEDRASAEVEE---DLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKF 1671
            SA       AE+E+   DLK ++K ++R+K DL  S     DK+K G  G+KERYY  KF
Sbjct: 435  SAT-----HAEIEQNTKDLKDELKRSIRKKCDLRLSEDFLIDKIKFGAPGYKERYYKAKF 489

Query: 1672 QAHTDEEREKIREDIVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKI 1851
               T  + E  R++IV  YTEGL WV+QYY++GV+SW WFYP+HY PFASD  G+ ++++
Sbjct: 490  SVETSTDIEGKRKEIVENYTEGLVWVLQYYFSGVASWRWFYPFHYGPFASDLKGMGQVRV 549

Query: 1852 TFSLGKPFKPFNQLLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAW 2031
             F  G PF P +QLL VLP ASA ALP  Y  LM+D  S ++DFYP DFE+D  GK F W
Sbjct: 550  KFEKGVPFLPLDQLLSVLPPASADALPKAYEQLMLDEQSRILDFYPQDFEVDTEGKPFTW 609

Query: 2032 QGVAKLPFIDETRLLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYA 2211
            QG+ KLP+ID+ RL+   K ++  L+E+E +RNS K D L V S   LA+       K+ 
Sbjct: 610  QGICKLPWIDDGRLVAETKELKNELSEKEAIRNSPKADSLLVRSSSKLAE-------KFG 662

Query: 2212 NLSQKKRAKLREVINPKSSEGLNGYMSPCHGAIDACPPKFTSPINKMEDIINNSVLSVIF 2391
            +LS    A  + +    SS+G+ G +S CH  +D        P + + D   + VL V +
Sbjct: 663  SLSVDPNAPCK-LDTRISSDGIGGTISLCHEFVD-------KPCSDICDSKEDRVLCVYY 714

Query: 2392 RLGEGCSHIPRPLEGVVMPKQTVYPGHMKPTSIWHDEGGQKE-----RIQNR 2532
             L  G +HIPR L GV +P++T++ G +  T +WH+   QK      R+QN+
Sbjct: 715  ELPTGSNHIPRLLSGVSLPEKTIFEGDIMETELWHER--QKHFSIYGRVQNQ 764


>ref|XP_005525544.1| PREDICTED: 5'-3' exoribonuclease 2 [Pseudopodoces humilis]
          Length = 949

 Score =  675 bits (1741), Expect = 0.0
 Identities = 362/801 (45%), Positives = 477/801 (59%), Gaps = 13/801 (1%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVP+F+RWL++KYP IIV+ +EE+A   NGV++P+D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1    MGVPAFFRWLSRKYPSIIVNCIEEKAKECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PC HPED+P+P   +++   +F+YIDRIF IVRPR+LLYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                      PP+   +  DSN ITPGTEFM+ L+  L+YYI  
Sbjct: 121  ASKEGMEAAEEKQKIRQEILAKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            RLN D GW+N+ VILSDA+ PGEGEHKIM +IR QR + N+DPNT HCL G DADLIMLG
Sbjct: 181  RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDG-KRKRESKIEKEANG-SFART 1020
            LATHE +F+I+RE     K  + C +C Q+GH+  +C G  R+++ K ++ A+    +  
Sbjct: 241  LATHEPNFTIIREEFKPNK-PKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTLPVSEQ 299

Query: 1021 PYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGA 1200
             + F+ +  LREYLE ++ + + PF  DFER VDD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 300  EFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359

Query: 1201 INLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEIAK 1380
            I+ L+ +YK   +  GGYLT S  V+L   +  +  VG  EDSIFKKR  +        K
Sbjct: 360  IDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQK 419

Query: 1381 QRSSNKK---------AQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSAAVEDRASAE 1533
            ++    K          Q     +   S+    C               ++      +  
Sbjct: 420  EKRKRLKRDQPSFIPGGQFSPQALGNRSSPQAICNPRQAAFEMRMHDRQNSTTAASPNTS 479

Query: 1534 VEEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQAHTDEEREKIRED 1713
            +  D    +   ++ K +   S    ED ++L + GWK+RYY  KF    D   EK R  
Sbjct: 480  LTPDGSPSLGAGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFD--VDASDEKFRRK 537

Query: 1714 IVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLG-KPFKPFNQ 1890
            +V  Y EGLCWV++YYY G +SWNW+YP+HYAPFASDF G++ +   F  G KPFKP  Q
Sbjct: 538  VVQSYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQ 597

Query: 1891 LLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAKLPFIDETR 2070
            L+GV PAAS   LP  +R LM DP S +IDFYP DF IDLNGK++AWQGVA LPF+DE R
Sbjct: 598  LMGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERR 657

Query: 2071 LLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQKKRAKLREV 2250
            L  A++ V   LT  E  RNS   D+LFV   H L   I   YK  +  +          
Sbjct: 658  LRAALEEVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFIVEQYKSKSGEAVD-------- 709

Query: 2251 INPKSSEGLNGYMSPCHGAIDACPPKFT-SPINKMEDIINNSVLSVIFRLGEGCSHIPRP 2427
            I P+   G+ G ++    A+   P +   SP+  + D+  NS +S+ F+        P+ 
Sbjct: 710  IPPELCHGIQGKLTLNDNAV--LPDQVVQSPVPMLRDLTQNSAVSISFK-------DPQF 760

Query: 2428 LEGVVMPKQTVYPGHMKPTSI 2490
             E  V  K TV PG  KP  +
Sbjct: 761  AEDFVF-KATVLPGAKKPAPV 780


>ref|XP_005486835.1| PREDICTED: 5'-3' exoribonuclease 2 [Zonotrichia albicollis]
          Length = 949

 Score =  674 bits (1740), Expect = 0.0
 Identities = 363/803 (45%), Positives = 478/803 (59%), Gaps = 15/803 (1%)
 Frame = +1

Query: 127  MGVPSFYRWLAQKYPLIIVDAVEEEATTINGVEIPLDSSKPNPNNMEFDNLYLDMNGIIH 306
            MGVP+F+RWL++KYP IIV+ VEE+A   NGV++P+D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1    MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIH 60

Query: 307  PCFHPEDRPSPLTYEDVFKNMFDYIDRIFRIVRPRKLLYMAIDGVAPRAKMNQQRSXXXX 486
            PC HPED+P+P   +++   +F+YIDRIF IVRPR+LLYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 487  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKVESQVHDSNVITPGTEFMETLSVVLQYYIHL 666
                                      PP+   +  DSN ITPGTEFM+ L+  L+YYI  
Sbjct: 121  ASKEGMEAAEEKQKIRQEILAKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD 180

Query: 667  RLNHDSGWRNVKVILSDANVPGEGEHKIMSFIRMQRNKENYDPNTRHCLYGLDADLIMLG 846
            RLN D GW+N+ VILSDA+ PGEGEHKIM +IR QR + N+DPNT HCL G DADLIMLG
Sbjct: 181  RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240

Query: 847  LATHEVHFSILREVITDKKEAEKCFICGQIGHKATNCDG-KRKRESKIEKEANG-SFART 1020
            LATHE +F+I+RE     K  + C +C Q+GH+  +C G  R+++ K ++ A+    +  
Sbjct: 241  LATHEPNFTIIREEFKPNK-PKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTMPVSEQ 299

Query: 1021 PYQFLNIWTLREYLELDMKIPNPPFEIDFERLVDDFVFICFFVGNDFLPHMPTLEIREGA 1200
             + F+ +  LREYLE ++ + + PF  DFER VDD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 300  EFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359

Query: 1201 INLLMTVYKKEFNAMGGYLTNSSEVHLSNAEHFLQVVGTYEDSIFKKRSFEQKRSSEIAK 1380
            I+ L+ +YK   +  GGYLT S  V+L   +  +  VG  EDSIFKKR  +        K
Sbjct: 360  IDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQK 419

Query: 1381 QRSSNKK---------AQDLKATVRESSNTVMPCKSXXXXXXXXXXXXXSAAVEDRASAE 1533
            ++    K          Q     +   S+    C               ++      +  
Sbjct: 420  EKRKRLKRDQPSFIPGGQFSPQALGNRSSPQAICNPRQAAFEMRMHDRQNSTTSASPNTS 479

Query: 1534 VEEDLKFKIKMALREKEDLMSSGGMEEDKVKLGDAGWKERYYAEKFQAHTDEEREKIRED 1713
            +  D    +   ++ K +   S    ED ++L + GWK+RYY  KF    D   EK R  
Sbjct: 480  LTPDSSPSLGGGIKRKPEDSDSEPEPEDNIRLWETGWKQRYYKNKFD--VDASDEKFRRK 537

Query: 1714 IVSKYTEGLCWVMQYYYNGVSSWNWFYPYHYAPFASDFTGVSKLKITFSLG-KPFKPFNQ 1890
            +V  Y EGLCWV++YYY G +SWNW+YP+HYAPFASDF G++ +   F  G KPFKP  Q
Sbjct: 538  VVQSYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQ 597

Query: 1891 LLGVLPAASAQALPVKYRALMMDPNSPVIDFYPSDFEIDLNGKRFAWQGVAKLPFIDETR 2070
            L+GV PAAS   LP  +R LM DP S +IDFYP DF IDLNGK++AWQGVA LPF+DE R
Sbjct: 598  LMGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERR 657

Query: 2071 LLDAVKNVEGSLTEREKLRNSTKFDILFVYSKHGLAQDIYNLYKKYANLSQKKRAKLREV 2250
            L  A++ V   LT  E  RNS   D+LFV   H L   I   YK           K  E 
Sbjct: 658  LRAALEKVYPDLTPEETRRNSLGGDVLFVGKHHPLCDFIVEQYK----------TKNTEA 707

Query: 2251 IN--PKSSEGLNGYMSPCHGAIDACPPKFT-SPINKMEDIINNSVLSVIFRLGEGCSHIP 2421
            ++  P+   G+ G ++    A+   P +   SP+  + D+  NS +S+ F+        P
Sbjct: 708  VDIPPELCHGIQGKLTLNDNAV--LPDQVVQSPVPMLRDLTQNSAVSISFK-------DP 758

Query: 2422 RPLEGVVMPKQTVYPGHMKPTSI 2490
            +  E  +  K TV PG  KP  +
Sbjct: 759  QFAEDFIF-KATVLPGAKKPAPV 780