BLASTX nr result
ID: Ephedra27_contig00008494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00008494
(1786 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002135479.1| GA28568 [Drosophila pseudoobscura pseudoobsc... 55 6e-08
ref|XP_005233256.1| PREDICTED: neurofilament heavy polypeptide [... 45 2e-07
emb|CAK18547.1| cell surface flocculin [Saccharomyces cerevisiae] 51 3e-07
ref|NP_593531.1| nucleolar protein required for rRNA processing ... 62 6e-07
emb|CAA88179.1| gar2 [Schizosaccharomyces pombe] 62 6e-07
ref|XP_003104780.1| CRE-UNC-89 protein [Caenorhabditis remanei] ... 47 8e-07
ref|XP_415310.4| PREDICTED: neurofilament heavy polypeptide [Gal... 54 2e-06
>ref|XP_002135479.1| GA28568 [Drosophila pseudoobscura pseudoobscura]
gi|198151215|gb|EDY74106.1| GA28568 [Drosophila
pseudoobscura pseudoobscura]
Length = 1997
Score = 55.5 bits (132), Expect(2) = 6e-08
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 7/235 (2%)
Frame = -3
Query: 1448 SSTKQKPTKEAQNQVTKEVPKQSVGSNEEPKKENLNVPKVTGLNSTSRATTASQNGLVKS 1269
SS+ ++P+ + + P S S+EEP + T NS+S +S +S
Sbjct: 244 SSSSEEPSSTEPSPESSTEPNSS--SSEEPSSTEPSPESSTEPNSSSSEEPSSTERSPES 301
Query: 1268 ALSKSQRDRTSITTTNNASTGLSRTSNMAPARKSISGDPRAKKPIIRE-------DKRRA 1110
+ S ++T +ST S S+ P+ S S +P + +P E + +
Sbjct: 302 STEPSNSSSEEPSSTEPSSTEPSPESSTEPSNSS-SKEPSSTEPSSTEPSPESSTEPNNS 360
Query: 1109 SVSMVSKTDAKPRKSPEPSETKSENSEATVTKTESLSESVDSKEDSGVECMEKTDICSVK 930
S S T+ P S EP+ + SE +T ES +E +S + T+ S K
Sbjct: 361 SSEEPSSTEPSPESSTEPNSSSSEEPSSTERSPESSTEPSNSSSEEP----SSTEPSSTK 416
Query: 929 KDEPGSLSFSLKGYAQDMASSPGGSSMAPDSPGPITFEFSRLKAAPEPEVDLSSE 765
S S + ++ P + +P+S S ++ EP + S+E
Sbjct: 417 PSPESSTEPSNSSSEEPSSTEPSSTEPSPESSTEPNSSSSEEPSSTEPSPESSTE 471
Score = 30.0 bits (66), Expect(2) = 6e-08
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 2/125 (1%)
Frame = -2
Query: 660 SKQTAVYGPVKESISKQNPIHA--PLMVSKQTSAPVETKQTTVPGPVKEPVSKQKPMYAP 487
S++ + P ES ++ N + P + + E ++ P S +P +P
Sbjct: 503 SEEPSSTKPSPESSTEPNSSSSEEPSSTERSPESSTEPSNSSSEEPTSTEPSSTEP--SP 560
Query: 486 TMDSKQTSAPMEYKQTTVPGSVKEPKEKVMSVPQPKQTLRAVVSEPEPKHESASTPAADV 307
++ ++ E +T P + S +P T + S EP S+ P++
Sbjct: 561 ESSTEPNNSSSEEPSSTEPSPESSTEPNSSSSEEPSSTEPSPESSTEPNSSSSEEPSSTE 620
Query: 306 IRPES 292
PES
Sbjct: 621 RSPES 625
>ref|XP_005233256.1| PREDICTED: neurofilament heavy polypeptide [Falco peregrinus]
Length = 604
Score = 45.1 bits (105), Expect(2) = 2e-07
Identities = 51/240 (21%), Positives = 85/240 (35%), Gaps = 8/240 (3%)
Frame = -3
Query: 1424 KEAQNQVTKEVPKQSVGSNEEPKKENLNVPKVTGLNSTSRATTASQNGLVKSALSKSQRD 1245
+EA+ K K + S EE K + P+ S A + + K A +
Sbjct: 223 EEAKTPTVKSPEKPAPPSKEEAKTPTVKSPEKPAPPSKEEAKSPAIKSPEKPAPPSKEEA 282
Query: 1244 RTSITTTNNASTGLSRTSNMAPARKSISGDPRAKKPIIREDKRRASVSMVSKTDAKPRKS 1065
+T + S+ PA KS P K E+ + +V K+ ++
Sbjct: 283 KTPAMKSPEKPAPPSKEEAKTPAMKSPEKTPTPSK----EEAKTPAVKSPEKSPTPSKEE 338
Query: 1064 PEPSETKSENSEATVTKTESLSESVDSKEDSGVECMEKTDICSVKKDE--PGSLSFSLKG 891
+ TKS + +K E+ + +V S E E+ SVK E P K
Sbjct: 339 AKSPATKSPEKPSPPSKEEAKTPAVKSPEKPAPPSKEEAKTPSVKSPEKTPTPSKEEAKS 398
Query: 890 YAQDMASSP------GGSSMAPDSPGPITFEFSRLKAAPEPEVDLSSEETFTPRFDFKGP 729
A P G ++ SP + + +P+ E + E T +P+ + K P
Sbjct: 399 PAVKSPEKPPSPSKEEGKTLTVKSPDKVKSPVKEVVKSPQKEAAPAKEPTPSPQKEPKAP 458
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Frame = -2
Query: 663 ESKQTAVYGPVKESISKQNPIHAPLMVSKQTSAPVET---KQTTVPGPVKEPVSKQKPMY 493
E + V P K + + AP K SA VE K VP P V + KP
Sbjct: 461 EEQPKEVKPPSKPAPEEGRKAEAP---KKDVSAKVEKPKEKAAAVPEPPAPQVKETKPGL 517
Query: 492 APTMDSK-QTSAPMEYKQTTVPGSVKEPKEKVMSVPQPKQTLRAVVSEPEPKHESASTPA 316
P + K + AP + +Q +VKE ++ PK +A EPK E P
Sbjct: 518 KPVEEGKAEKEAPPKPQQEVSKAAVKEAEK-------PKTEEKA----EEPKKEKVEDPK 566
Query: 315 ADVIRPESPPRSRKRWGSAE 256
A V +P+ P++ K AE
Sbjct: 567 AKV-KPKEEPKASKDPSKAE 585
>emb|CAK18547.1| cell surface flocculin [Saccharomyces cerevisiae]
Length = 1630
Score = 50.8 bits (120), Expect(2) = 3e-07
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 18/248 (7%)
Frame = -3
Query: 1448 SSTKQKPT--KEAQNQVTKEVPKQSVGSNEEPKK-------ENLNVPKVTGLNSTSRATT 1296
S TK+K T K + T VP S + E E+ + P T +ST+ +++
Sbjct: 258 SCTKKKTTRSKTCTKKTTTPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSS 317
Query: 1295 ASQNGLVKSALSKSQRDRTSITTTNNAS-----TGLSRTSNMAPARKSISGDPRAKKPII 1131
A S S +S TT ++++ + + S+ P S + A P
Sbjct: 318 APAPTPSSSTTESSSAPVSSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPAPTP 377
Query: 1130 REDKRRASVSMV--SKTDAKPRKSPEPSETKSENSEATVTK--TESLSESVDSKEDSGVE 963
+S + V S T++ +P PS + +E+S A V+ TES S V + S E
Sbjct: 378 SSSTTESSSAPVTSSTTESSSAPAPTPSSSTTESSSAPVSSSTTESSSAPVPTPSSSTTE 437
Query: 962 CMEKTDICSVKKDEPGSLSFSLKGYAQDMASSPGGSSMAPDSPGPITFEFSRLKAAPEPE 783
T + S + + + + + +S+P SS S P++ + AP P
Sbjct: 438 S-SSTPVTSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVSSSTTESSVAPVPT 496
Query: 782 VDLSSEET 759
S+ E+
Sbjct: 497 PSSSTTES 504
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 35/144 (24%), Positives = 49/144 (34%), Gaps = 25/144 (17%)
Frame = -2
Query: 669 PGESKQTAVYGPVKESISKQNPIHAPLMVSKQT---SAPV-----ETKQTTVPGPVKEPV 514
P S + PV S ++ + P S T SAPV E+ VP P
Sbjct: 539 PSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVSSSTTESSSAPVPTPSSSTT 598
Query: 513 -SKQKPMYAPTMDSKQTSAPMEYKQTT----------------VPGSVKEPKEKVMSVPQ 385
S P+ + T +S AP TT P S + V VP
Sbjct: 599 ESSSTPVTSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVSSSTTESSVAPVPT 658
Query: 384 PKQTLRAVVSEPEPKHESASTPAA 313
P + S P P S++T ++
Sbjct: 659 PSSSTTESSSAPVPTPSSSTTESS 682
Score = 47.4 bits (111), Expect(2) = 9e-06
Identities = 66/259 (25%), Positives = 98/259 (37%), Gaps = 29/259 (11%)
Frame = -3
Query: 1448 SSTKQKPTKEAQNQVTKEVPKQS--VGSNEEPKKENLNVPKVTGLNSTSRATTASQNGLV 1275
SS+ PT + + P S S+ P + V + + S +TT S + V
Sbjct: 612 SSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVSSSTTESSVAPVPTPSSSTTESSSAPV 671
Query: 1274 ----KSALSKSQRDRTSITTTNN---ASTGLSRT--SNMAPARKSISGDPRAKKPIIRED 1122
S S TS TT ++ A T S T S+ AP S + A P
Sbjct: 672 PTPSSSTTESSSTPVTSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSS 731
Query: 1121 KRRASVSMV--SKTDAKPRKSPEPSETKSENSEATVTK--TESLSESVDSKEDSGVECME 954
+S + V S T++ +P PS + +E+S A VT TES S V + S E
Sbjct: 732 TTESSSTPVTSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSS 791
Query: 953 KTDICSVKKDE----PGSLSFSLKGYAQDMASSPGGSSMAP----------DSPGPITFE 816
S + P S + + + + SS SS AP S P+T
Sbjct: 792 TPVTSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPAPTPSSSTTESSSAPVTSS 851
Query: 815 FSRLKAAPEPEVDLSSEET 759
+ +AP P S+ E+
Sbjct: 852 TTESSSAPVPTPSSSTTES 870
Score = 30.8 bits (68), Expect(2) = 9e-06
Identities = 33/147 (22%), Positives = 48/147 (32%), Gaps = 28/147 (19%)
Frame = -2
Query: 669 PGESKQTAVYGPVKESISKQNPIHAPLMVSKQT---SAPVETKQTTVPGPVKEPV----- 514
P S + PV S ++ + P S T SAPV T ++ PV
Sbjct: 863 PSSSTTESSSAPVSSSTTESSVAPVPTPSSSTTESSSAPVPTPSSSTTESSSTPVTSSTT 922
Query: 513 ----------------SKQKPMYAPTMDSKQTSAPMEYKQTT----VPGSVKEPKEKVMS 394
S P+ + T +S P TT P S + V
Sbjct: 923 ESSSAPAPTPSSSTTESSSAPVTSSTTESSSAQVPTPSSSTTESSSAPVSSSTTESSVAP 982
Query: 393 VPQPKQTLRAVVSEPEPKHESASTPAA 313
VP P + S P P S++T ++
Sbjct: 983 VPTPSSSTTESSSAPVPTPSSSTTESS 1009
>ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-] gi|6226864|sp|P41891.2|GAR2_SCHPO RecName:
Full=Protein gar2 gi|7523472|emb|CAB86413.1| nucleolar
protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 62.4 bits (150), Expect = 6e-07
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Frame = -3
Query: 1463 AIERLSSTKQKPTKEAQNQVTKEVPKQSVGSNEEPKKENLNVPKVTGLNSTSRATTASQN 1284
AIE+ S +K K TKEA KE+ KQS ++ PKK + + + ++ +
Sbjct: 22 AIEKPSKSK-KITKEA----AKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKK 76
Query: 1283 GLVKSALSKSQRDRTSITTTNNASTGLSRTSNMAPARKSISGDPRAKKPII--REDKRRA 1110
K S +S + + ++S+ +S+ + + S S +++ +I E+K+ +
Sbjct: 77 SKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKES 136
Query: 1109 SVSMVSKTDAKPRKSP----EPSETKSENSEATVTKTESLSESVDSKEDSGVECMEKTDI 942
S S ++++ + E + S +S + + +ES SES S+ + E +EKT+
Sbjct: 137 SSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTE- 195
Query: 941 CSVKKDEPGSLSFSLKGYAQDMASSPGGSSMAPDSPGPITFE-FSRLKAAPEPE 783
+K E S S S + D +S G S + DS + E + KA P E
Sbjct: 196 ---EKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASE 246
>emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 62.4 bits (150), Expect = 6e-07
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Frame = -3
Query: 1463 AIERLSSTKQKPTKEAQNQVTKEVPKQSVGSNEEPKKENLNVPKVTGLNSTSRATTASQN 1284
AIE+ S +K K TKEA KE+ KQS ++ PKK + + + ++ +
Sbjct: 22 AIEKPSKSK-KITKEA----AKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKK 76
Query: 1283 GLVKSALSKSQRDRTSITTTNNASTGLSRTSNMAPARKSISGDPRAKKPII--REDKRRA 1110
K S +S + + ++S+ +S+ + + S S +++ +I E+K+ +
Sbjct: 77 SKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKES 136
Query: 1109 SVSMVSKTDAKPRKSP----EPSETKSENSEATVTKTESLSESVDSKEDSGVECMEKTDI 942
S S ++++ + E + S +S + + +ES SES S+ + E +EKT+
Sbjct: 137 SSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTE- 195
Query: 941 CSVKKDEPGSLSFSLKGYAQDMASSPGGSSMAPDSPGPITFE-FSRLKAAPEPE 783
+K E S S S + D +S G S + DS + E + KA P E
Sbjct: 196 ---EKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASE 246
>ref|XP_003104780.1| CRE-UNC-89 protein [Caenorhabditis remanei]
gi|308257478|gb|EFP01431.1| CRE-UNC-89 protein
[Caenorhabditis remanei]
Length = 4709
Score = 47.0 bits (110), Expect(2) = 8e-07
Identities = 66/311 (21%), Positives = 110/311 (35%), Gaps = 9/311 (2%)
Frame = -3
Query: 1634 KSAASANKGTPKLTTSRRHQIKPLTNVLSLGFQKKTSINQXXXXXXXXXXXXXXXKEAIE 1455
+S +GTPK S + P V+ +KK S K + +
Sbjct: 61 ESQTDVREGTPKRRVSFAEEELP-KEVIDADRKKKKSPTPEKTGDEKPKSPTKKEKSSEK 119
Query: 1454 RLSSTKQKPTKEAQN-QVTKEVPKQSVGSNEEPKKENLNVPKVTGLNSTSRATTASQNGL 1278
+ + PTK+ ++ + +E P+ S + P+K PK S +A++
Sbjct: 120 GTTEEVKSPTKKEKSLEKVEEKPQSSTKKEKLPEKVADEKPKSPTKKDESPEKSATEEVK 179
Query: 1277 VKSALSKSQRDRTSITTTNNASTGLSRTSNMAPARKSISGDPRAKKPIIREDKRRASVSM 1098
+ KS +S T + + M+P +K S + A + +
Sbjct: 180 SPTKKEKSPEKPSSPTKKEKSPEKSADEKPMSPTKKEKSPEKSAVEDV------------ 227
Query: 1097 VSKTDAKPRKSPEPSETKSENSEATVTKTESL--------SESVDSKEDSGVECMEKTDI 942
K+ K KSPE + +SE T+ KTE+ SE + S D VE K+ I
Sbjct: 228 --KSPVKTEKSPEATNVVEVSSETTIEKTETTHEVEVTKSSEEIKSATDKNVEETPKSPI 285
Query: 941 CSVKKDEPGSLSFSLKGYAQDMASSPGGSSMAPDSPGPITFEFSRLKAAPEPEVDLSSEE 762
K E K A+++ S P+ P +T + + P E
Sbjct: 286 KKEKSPE--------KSTAEEVKSP---KEKTPEKPSSLTKKEKSPEKPSSPNKKTEDEG 334
Query: 761 TFTPRFDFKGP 729
+P K P
Sbjct: 335 VKSPTKKEKSP 345
Score = 34.7 bits (78), Expect(2) = 8e-07
Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 19/149 (12%)
Frame = -2
Query: 636 PVKESISKQNPIHAPLMV-SKQTSAPVETKQTTVPGPVKE----PVSKQKPMYAPTM-DS 475
PVK+ S + + L +K T+ VET ++ V + E P+SK+ P +P S
Sbjct: 355 PVKKEKSPEKSMEDRLSSPTKTTTEAVETPKSPVKTEIGEKPTSPISKKSPPGSPKKAKS 414
Query: 474 KQTSAPMEYKQTTVPGSVKEPKEKVMSVPQPKQTLRAVVSEPEPKH-------------E 334
+T A K T E E+ P K+ V++ +PK E
Sbjct: 415 PETEADSSVKSPTKKEKSPEKVEEKPQSPTKKEKSPEKVADEKPKSPTKKDKSPEKSATE 474
Query: 333 SASTPAADVIRPESPPRSRKRWGSAEGTA 247
+P PE P K+ S E +A
Sbjct: 475 EVKSPTKKEKSPEKPSSPTKKEKSPEKSA 503
>ref|XP_415310.4| PREDICTED: neurofilament heavy polypeptide [Gallus gallus]
Length = 947
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 72/280 (25%), Positives = 105/280 (37%), Gaps = 51/280 (18%)
Frame = -3
Query: 1436 QKPTKE-AQNQVTKEVPKQSVGSNEEPKKENLNVPKVTGLNSTSRATTASQNGLVKSALS 1260
+ PTKE A++ K K S S EE K + P+ S A + + K +
Sbjct: 480 ESPTKEEAKSPAVKSPEKPSTPSKEEAKSPTVKSPEKPSTPSKEEAKSPTVKSPEKPSTP 539
Query: 1259 KSQRDRTSITTTNNASTGLSRTSNMAPARKS-----ISGDPRAKKPIIREDKRRASVSMV 1095
+ D++ + + S+ +PA KS AK P ++ ++ A S
Sbjct: 540 SKEEDKSPAVKSPEKPSTPSKEEAKSPAVKSPEKPSTPSKEEAKSPAVKSPEKPAPPS-- 597
Query: 1094 SKTDAK------PRKSPEPSE-------TKSENSEATVTKTESLSESVDSKEDSGVECME 954
K +AK P K P PS+ KS AT K E+ + +V S E E
Sbjct: 598 -KEEAKSPAVKSPEKPPVPSKEEAKSPPVKSPEKPATPLKEEAKTPTVKSPEKPPTPTKE 656
Query: 953 KTDICSVKKDE--PGSLSFSLKGYA-----------QDMASSPGGSS------------- 852
+T SVK E P +L K A ++ A SP S
Sbjct: 657 ETKPPSVKSPEKPPTALKEEAKSPAVKSPEKPATPSKEEAKSPAVKSPEKPSTPPKEEAK 716
Query: 851 ----MAPDSPGPITFEFSRLKAAPEPE--VDLSSEETFTP 750
+P+ P P + E ++ AA PE V S EE TP
Sbjct: 717 TPAVKSPEKPTPPSKEEAKTPAAKSPEKPVSPSKEEAKTP 756
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 42/168 (25%), Positives = 61/168 (36%), Gaps = 38/168 (22%)
Frame = -2
Query: 636 PVKESISKQNPIHAPLMVSKQTSAPVETKQTTVP----------------GPVK-EPVSK 508
P KE+ + P+ AP K + + K+ P P K E K
Sbjct: 775 PQKEAAPAKEPVPAPPKEPKAPAKEEQPKEEKAPPKPAAEGRKDEAPKKDAPAKAEEKPK 834
Query: 507 QKPMYAP------TMDSKQTSAPMEY-----------KQTTVPGSVKEPKEKVM--SVPQ 385
+K P ++K S P E +Q +VKEP++ V +
Sbjct: 835 EKAAAGPEPPAPQVKETKAASKPAEEGKAEKDAQPKPQQEGGKAAVKEPEKPKAEEKVEE 894
Query: 384 PKQTLRAVVSEP--EPKHESASTPAADVIRPESPPRSRKRWGSAEGTA 247
PK+T V EP E + S P D + PP++ K S EG A
Sbjct: 895 PKKT----VEEPKKEKVEDPKSKPKDDSKASKEPPKAEKP-PSKEGKA 937