BLASTX nr result
ID: Ephedra27_contig00008335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00008335
(579 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001056734.1| Os06g0137600 [Oryza sativa Japonica Group] g... 83 4e-14
ref|XP_003557228.1| PREDICTED: probable ribosome-binding factor ... 82 1e-13
ref|NP_001149358.1| LOC100282982 [Zea mays] gi|195626630|gb|ACG3... 81 2e-13
ref|XP_006655767.1| PREDICTED: probable ribosome-binding factor ... 80 3e-13
ref|XP_004964479.1| PREDICTED: probable ribosome-binding factor ... 80 5e-13
dbj|BAJ88068.1| predicted protein [Hordeum vulgare subsp. vulgare] 80 5e-13
gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis] 79 8e-13
ref|XP_002436435.1| hypothetical protein SORBIDRAFT_10g002540 [S... 78 2e-12
ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor ... 77 2e-12
gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus pe... 77 2e-12
ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citr... 77 4e-12
gb|EOX97829.1| Ribosome-binding factor A family protein isoform ... 77 4e-12
ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor ... 75 9e-12
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus... 75 9e-12
ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Caps... 74 4e-11
ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Popu... 73 6e-11
ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor ... 72 8e-11
ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor ... 72 1e-10
ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor ... 72 1e-10
ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thalian... 71 2e-10
>ref|NP_001056734.1| Os06g0137600 [Oryza sativa Japonica Group]
gi|55296456|dbj|BAD68652.1| ribosome-binding factor A
protein-like [Oryza sativa Japonica Group]
gi|55296997|dbj|BAD68472.1| ribosome-binding factor A
protein-like [Oryza sativa Japonica Group]
gi|113594774|dbj|BAF18648.1| Os06g0137600 [Oryza sativa
Japonica Group] gi|125553968|gb|EAY99573.1| hypothetical
protein OsI_21548 [Oryza sativa Indica Group]
gi|125595983|gb|EAZ35763.1| hypothetical protein
OsJ_20053 [Oryza sativa Japonica Group]
gi|215701451|dbj|BAG92875.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215704652|dbj|BAG94280.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765427|dbj|BAG87124.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 209
Score = 83.2 bits (204), Expect = 4e-14
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+Q+GKR++LRLTP + FIEDES+ +G+R+ AIL+ +K+ERE++ E N+ E+
Sbjct: 127 KYVRSQIGKRMKLRLTPEIRFIEDESMERGSRILAILDKLKEEREQQ------EGNEEEE 180
Query: 181 DNQIGEHGEIPENEE-DWAS---DEDELIYIK 264
D GE + E EE DW + DE+++IY+K
Sbjct: 181 D---GEGANLSEEEEGDWDADEPDEEDIIYVK 209
>ref|XP_003557228.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Brachypodium distachyon]
Length = 205
Score = 82.0 bits (201), Expect = 1e-13
Identities = 40/88 (45%), Positives = 62/88 (70%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+Q+GKR++LRLTP + FIEDES+ +G+R+ IL+ +K+ERE++ E ND E+
Sbjct: 124 KYVRSQIGKRMKLRLTPEIRFIEDESMERGSRILTILDKLKEEREKQ------EGNDLEE 177
Query: 181 DNQIGEHGEIPENEEDWASDEDELIYIK 264
D + + GE + E DE+++IY+K
Sbjct: 178 DAETSDLGEEDGDWEGDEPDEEDIIYVK 205
>ref|NP_001149358.1| LOC100282982 [Zea mays] gi|195626630|gb|ACG35145.1|
ribosome-binding factor A [Zea mays]
gi|413953305|gb|AFW85954.1| ribosome-binding factor A
[Zea mays]
Length = 206
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/91 (43%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+Q+G+R++LRLTP + FIEDES+ +G+R+ AIL+ +K+ERE++ E + + +D
Sbjct: 125 KYVRSQIGRRMKLRLTPEIRFIEDESMERGSRILAILDKLKEEREQQ----EGKDGEEDD 180
Query: 181 DNQIGEHGEIPENEEDWAS---DEDELIYIK 264
D+ I E E++ DW + DE+++IY+K
Sbjct: 181 DSYISE-----EDDGDWDADEPDEEDIIYVK 206
>ref|XP_006655767.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like,
partial [Oryza brachyantha]
Length = 165
Score = 80.5 bits (197), Expect = 3e-13
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+Q+GKR++LRLTP + FIEDES+ +G+R+ AIL+ +K+ERE++ E N+ E+
Sbjct: 83 KYVRSQIGKRMKLRLTPEIRFIEDESMERGSRILAILDKLKEEREQE------EGNEEEE 136
Query: 181 DNQIGEHGEIPENEE-DWAS---DEDELIYIK 264
+ GE + E+E+ DW + DE+++IY+K
Sbjct: 137 N---GEGANLSEDEDGDWDADEPDEEDIIYVK 165
>ref|XP_004964479.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Setaria italica]
gi|514760187|ref|XP_004964480.1| PREDICTED: probable
ribosome-binding factor A, chloroplastic-like isoform X2
[Setaria italica]
Length = 207
Score = 79.7 bits (195), Expect = 5e-13
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+Q+GKR++LRLTP + FIEDES+ +G+R+ AIL+ +K+ERE++ E D E+
Sbjct: 125 KYVRSQIGKRMKLRLTPEIRFIEDESMERGSRILAILDKLKEEREQQ------EGKDGEE 178
Query: 181 DNQIGEHGEIPENEE-DWAS---DEDELIYIK 264
D E + E EE DW + DE+++IY+K
Sbjct: 179 D---AEGSYVSEEEEGDWDADEPDEEDIIYVK 207
>dbj|BAJ88068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 212
Score = 79.7 bits (195), Expect = 5e-13
Identities = 42/92 (45%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+Q+GKR++LRLTP + FIEDES+ +G+R+ IL+ +K+ERE++ E N E+
Sbjct: 130 KYVRSQIGKRMKLRLTPEIRFIEDESMERGSRILTILDKLKEEREQR------EGNGEEE 183
Query: 181 DNQIGEHGEIPENEE-DWAS---DEDELIYIK 264
D GE ++ E E+ DW DE+++IY+K
Sbjct: 184 D---GEASDMVEEEDGDWEGDEPDEEDIIYVK 212
>gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis]
Length = 225
Score = 79.0 bits (193), Expect = 8e-13
Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR++LG+R++LRLTP + FIEDES+ +G+RV AIL+ IK E+ +T ED
Sbjct: 146 KYVRSELGRRMKLRLTPEIRFIEDESLERGSRVIAILDKIKNEK---------KTAVIED 196
Query: 181 DNQIGEHGEIPENEEDWASD--EDELIYIK 264
D +I E + P+++ DW SD ++++IY+K
Sbjct: 197 DEEI-ESSDAPQDDGDWESDDPDEDIIYVK 225
>ref|XP_002436435.1| hypothetical protein SORBIDRAFT_10g002540 [Sorghum bicolor]
gi|241914658|gb|EER87802.1| hypothetical protein
SORBIDRAFT_10g002540 [Sorghum bicolor]
Length = 207
Score = 77.8 bits (190), Expect = 2e-12
Identities = 41/91 (45%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+Q+GKR++LRLTP + FIEDES+ +G+R+ AIL+ +K+ERE++ E D E+
Sbjct: 125 KYVRSQIGKRMKLRLTPEIRFIEDESMERGSRILAILDKLKEEREQQ------EGKDGEE 178
Query: 181 DNQIGEHGEIPENEEDWAS---DEDELIYIK 264
D + E E + DW + DE+++IY+K
Sbjct: 179 DVEGSYISE--EEDGDWDADDPDEEDIIYVK 207
>ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568867951|ref|XP_006487287.1| PREDICTED: probable
ribosome-binding factor A, chloroplastic-like isoform X2
[Citrus sinensis]
Length = 229
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+QLG+R++LRLTP + FIEDES +G+RV AIL+ IK E+E + S++
Sbjct: 150 KYVRSQLGRRMKLRLTPEIRFIEDESFERGSRVIAILDRIKAEKEAAK---------SKN 200
Query: 181 DNQIGEHGEIPENEEDWASD--EDELIYIK 264
Q E ++PE+E DW D ++++IY+K
Sbjct: 201 KEQF-ESPDLPEDERDWEGDDPDEDIIYVK 229
>gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus persica]
Length = 223
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/89 (46%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR +LGKR++LRLTP + FIEDES+ +G+RV AIL+ IK E++ +P D +D
Sbjct: 144 KYVRGELGKRMKLRLTPEIRFIEDESLERGSRVIAILDKIKNEKK------DP---DIQD 194
Query: 181 DNQIGEHGEIPENEEDWASD--EDELIYI 261
+ Q+ E E P+++ DW D ++++IYI
Sbjct: 195 EEQL-ESSEAPQDDTDWEGDDPDEDIIYI 222
>ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citrus clementina]
gi|567861752|ref|XP_006423530.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525463|gb|ESR36769.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525464|gb|ESR36770.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
Length = 226
Score = 76.6 bits (187), Expect = 4e-12
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+QLG+R++LRLTP + FIEDES +G+RV AIL+ IK E+E + + + +
Sbjct: 147 KYVRSQLGRRMKLRLTPEIRFIEDESFERGSRVIAILDRIKAEKEAAKSKTKEQF----- 201
Query: 181 DNQIGEHGEIPENEEDWASD--EDELIYIK 264
E ++PE+E DW D ++++IY+K
Sbjct: 202 -----ESPDLPEDERDWEGDDPDEDIIYVK 226
>gb|EOX97829.1| Ribosome-binding factor A family protein isoform 1 [Theobroma
cacao] gi|508705934|gb|EOX97830.1| Ribosome-binding
factor A family protein isoform 1 [Theobroma cacao]
Length = 212
Score = 76.6 bits (187), Expect = 4e-12
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR++LGKR++LRLTP + FIEDES+ +G+RV AIL+ IK E++ +++
Sbjct: 132 KYVRSELGKRMKLRLTPEIRFIEDESLERGSRVIAILDKIKAEKKLA----------TDE 181
Query: 181 DNQIGEHGEIPENEEDWAS---DEDELIYIK 264
D + E + P+ + DW DE+++IY+K
Sbjct: 182 DEEEFESSDSPQEDRDWEGDDPDEEDIIYVK 212
>ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 215
Score = 75.5 bits (184), Expect = 9e-12
Identities = 38/92 (41%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQL--EYEPETNDS 174
KYVR +LG+R++LRLTP + FIEDES+ +G+RV AIL+ IK E++ ++ EY+ E++D+
Sbjct: 136 KYVRGELGRRMKLRLTPEIRFIEDESLERGSRVIAILDRIKNEKKIGEIQDEYQLESSDT 195
Query: 175 EDDNQIGEHGEIPENEEDWASD--EDELIYIK 264
P++++DW D ++++IY+K
Sbjct: 196 ------------PQDDKDWEDDDPDEDIIYVK 215
>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
putative [Ricinus communis]
Length = 221
Score = 75.5 bits (184), Expect = 9e-12
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR++LG+R++LRLTP + FIEDES +G+RV AIL+ IK E+E ++
Sbjct: 143 KYVRSELGRRMKLRLTPEIRFIEDESFERGSRVLAILDKIKAEKE-----------NTGS 191
Query: 181 DNQIGEHGEIPENEEDWASDEDE--LIYIK 264
++++ E + P+++ DW D+ + +IY+K
Sbjct: 192 EDELSESSDSPQDDRDWEGDDPDEGIIYVK 221
>ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Capsella rubella]
gi|482553206|gb|EOA17399.1| hypothetical protein
CARUB_v10005701mg [Capsella rubella]
Length = 219
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQ--LEYEPETNDS 174
KYVR++LGKR++LRLTP V FIEDES+ +G+RV AIL+ +K E+ E PE +DS
Sbjct: 140 KYVRSELGKRMKLRLTPEVRFIEDESMERGSRVIAILDKLKAEKGSGDGVNEGRPEPSDS 199
Query: 175 EDDNQIGEHGEIPENEEDWASD--EDELIYIK 264
+DNQ DW D ++++IY+K
Sbjct: 200 AEDNQ------------DWDVDDPDEDIIYVK 219
>ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Populus trichocarpa]
gi|550341216|gb|EEE86657.2| hypothetical protein
POPTR_0004s17120g [Populus trichocarpa]
Length = 224
Score = 72.8 bits (177), Expect = 6e-11
Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR+QLG+R++LRLTP + FIEDE + +G+RV AIL+ IK E++ + + + E +DS +
Sbjct: 145 KYVRSQLGRRMKLRLTPEIRFIEDEGLERGSRVIAILDRIKAEKDNAESQVD-ELSDSSN 203
Query: 181 DNQIGEHGEIPENEEDWASD--EDELIYIK 264
Q +EDW D ++++IY+K
Sbjct: 204 SIQY---------DEDWEGDDPDEDIIYVK 224
>ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Glycine max]
Length = 255
Score = 72.4 bits (176), Expect = 8e-11
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR++LGKRI+LRLTP + F+ED+S +G+RV AIL+ IK ++ + + E + N+ D
Sbjct: 180 KYVRSELGKRIKLRLTPEIRFLEDDSFERGSRVIAILDKIKNDKSQYKAELDSSPNEDHD 239
Query: 181 DNQIGEHGE 207
D+ GE E
Sbjct: 240 DDWDGEDPE 248
>ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum tuberosum]
Length = 225
Score = 72.0 bits (175), Expect = 1e-10
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR++LG+R++LRLTP + FIEDES+ +G+RV AIL+ IK E E K ND
Sbjct: 145 KYVRSELGRRMKLRLTPEIRFIEDESLERGSRVLAILDRIKDENENKD-SPSGSANDGSS 203
Query: 181 DNQIGEHGEIPENEEDWASDEDE---LIYIK 264
++ +++EDW D+ + +IY+K
Sbjct: 204 ES---------DDDEDWEGDDPDDEGIIYVK 225
>ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum lycopersicum]
Length = 221
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR++LG+R++LRLTP + FIEDES+ +G+RV AIL+ IK E E K P SE
Sbjct: 145 KYVRSELGRRMKLRLTPEIRFIEDESLERGSRVLAILDRIKDENENKD---SPNDGSSES 201
Query: 181 DNQIGEHGEIPENEEDWASDEDELIYIK 264
D G+ P D++ +IY+K
Sbjct: 202 DYDGDWEGDDP--------DDEGIIYVK 221
>ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana]
gi|78099793|sp|O65693.2|RBFA_ARATH RecName:
Full=Probable ribosome-binding factor A, chloroplastic;
Flags: Precursor gi|25082957|gb|AAN72022.1| putative
protein [Arabidopsis thaliana]
gi|30023650|gb|AAP13358.1| At4g34730 [Arabidopsis
thaliana] gi|332661016|gb|AEE86416.1| ribosome-binding
factor A [Arabidopsis thaliana]
Length = 215
Score = 71.2 bits (173), Expect = 2e-10
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 KYVRAQLGKRIRLRLTPHVYFIEDESIAKGNRVAAILESIKQERERKQLEYEPETNDSED 180
KYVR++LGKR++LRLTP V FIEDE++ +G+RV AIL+ IK E+ + + EP +DS +
Sbjct: 140 KYVRSELGKRMKLRLTPEVRFIEDEAMERGSRVIAILDKIKAEKGSGEGKTEP--SDSTE 197
Query: 181 DNQIGEHGEIPENEEDWASD--EDELIYIK 264
D+Q DW D ++++IY+K
Sbjct: 198 DDQ------------DWEVDDPDEDIIYVK 215