BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00007870
         (2546 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...   428   e-117
ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus ...   419   e-114
ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citr...   419   e-114
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]        416   e-113
ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citr...   414   e-112
gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]           413   e-112
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]        413   e-112
ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selag...   410   e-111
ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Sela...   410   e-111
ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Sela...   409   e-111
ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi...   408   e-111
ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi...   407   e-110
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   406   e-110
emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]       403   e-109
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   402   e-109
gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus pe...   402   e-109
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari...   393   e-106
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr...   392   e-106
ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   390   e-105
ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   390   e-105

>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score =  428 bits (1101), Expect = e-117
 Identities = 205/350 (58%), Positives = 271/350 (77%), Gaps = 1/350 (0%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPRD+ AN++ LLN E + PM+PWYKGFKGTIE +ATK+ GV YT++GI+EE+N T
Sbjct: 856  VPNYNPRDVAANVKRLLNGESMLPMEPWYKGFKGTIEKSATKEGGVGYTVSGIVEEINET 915

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELPIR+WT+DYK +LE L TG++K KEPFI DYKE++T+ RV+F+V L EENM I
Sbjct: 916  TLRITELPIRRWTEDYKVYLESLRTGSEKTKEPFIVDYKEHNTDTRVHFDVLLPEENMKI 975

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            ++QEGL+K F+LTTTISTSNMHLF+ +G+I+K+DTPEQIL+EFF +R ++Y KRKK  L 
Sbjct: 976  SQQEGLMKMFKLTTTISTSNMHLFNAKGVIKKYDTPEQILEEFFHLRLDYYGKRKKVLLD 1035

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE EL++L+NK RFILGVVNGEI+V+ RKR +L  ELR KGFTP  K  K +E A    
Sbjct: 1036 NLELELLKLDNKARFILGVVNGEIVVSKRKRADLVLELRDKGFTPFPKKSKNVEAALAGA 1095

Query: 723  AQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTT 899
              V E  E+ P +DD   +  DY+YL+SM IG+LT+E+VQ L  E+D+ E +V EL+  T
Sbjct: 1096 TPVDEEGEESPEVDDRGINASDYDYLLSMAIGTLTIEKVQELCAEKDKLEHDVKELRGLT 1155

Query: 900  PRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAARVFKLVPKHQR 1049
            P++LW KDLD F+ +LD     EA +DE ELN+M ++AA++F+ V K+ R
Sbjct: 1156 PKALWIKDLDAFLAQLDAEAVQEAKDDEYELNNMVSDAAKIFRQVGKNPR 1205


>ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus sinensis]
          Length = 1456

 Score =  419 bits (1076), Expect = e-114
 Identities = 210/354 (59%), Positives = 268/354 (75%), Gaps = 5/354 (1%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LLN E +EPM PWY+GF+GTIE TA+K++GVTYT+TGIIEEVN T
Sbjct: 843  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNET 902

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELPIR+WTQDY+EFLE ++  ND     FIR +++YS +  V FEVFLSEE+M  
Sbjct: 903  TLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDDTTVDFEVFLSEESMMR 958

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
             +QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF IR EFYEKRKK +L+
Sbjct: 959  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1018

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE EL++LENKVRFILGVVNGEI+VNNRKR +L  ELRQKGFTP  K+ K +E      
Sbjct: 1019 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1078

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
                E +E++P + +     DY+YL+SM IG+LTLE+VQ LL +RD+   EV +L+K TP
Sbjct: 1079 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1138

Query: 903  RSLWDKDLDEFILELDNLERIEASEDEKEL-----NSMNAEAARVFKLVPKHQR 1049
             SLW KDLD   ++LD L++ +A  +E+ +      + +A    V K  PK+ R
Sbjct: 1139 ESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKNAR 1192


>ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541275|gb|ESR52319.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1456

 Score =  419 bits (1076), Expect = e-114
 Identities = 210/354 (59%), Positives = 268/354 (75%), Gaps = 5/354 (1%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LLN E +EPM PWY+GF+GTIE TA+K++GVTYT+TGIIEEVN T
Sbjct: 843  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNET 902

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELPIR+WTQDY+EFLE ++  ND     FIR +++YS +  V FEVFLSEE+M  
Sbjct: 903  TLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDDTTVDFEVFLSEESMMR 958

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
             +QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF IR EFYEKRKK +L+
Sbjct: 959  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1018

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE EL++LENKVRFILGVVNGEI+VNNRKR +L  ELRQKGFTP  K+ K +E      
Sbjct: 1019 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1078

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
                E +E++P + +     DY+YL+SM IG+LTLE+VQ LL +RD+   EV +L+K TP
Sbjct: 1079 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1138

Query: 903  RSLWDKDLDEFILELDNLERIEASEDEKEL-----NSMNAEAARVFKLVPKHQR 1049
             SLW KDLD   ++LD L++ +A  +E+ +      + +A    V K  PK+ R
Sbjct: 1139 ESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKNAR 1192


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score =  416 bits (1069), Expect = e-113
 Identities = 228/436 (52%), Positives = 288/436 (66%), Gaps = 3/436 (0%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LLN E +EPM PWY+GFKG IE TA+K++GVTYT+TGIIEEV+ T
Sbjct: 655  IPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEAGVTYTITGIIEEVDET 714

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELP+R+WTQDY+EFLE ++TGND    PFI+++++YS +  V FEV L+EENM +
Sbjct: 715  TLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDDTTVEFEVILTEENMMV 770

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A+QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF +RFEFYEKRKK  L 
Sbjct: 771  AKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLD 830

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE EL+++ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K  K + E A AG
Sbjct: 831  NLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKTV-EVAVAG 889

Query: 723  A--QVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKT 896
            A     ET E+           DY+YL+SM IGSLTLE+VQ L  +RD+ + EV +L+K 
Sbjct: 890  ATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKA 949

Query: 897  TPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAA-RVFKLVPKHQRTIKXXXXX 1073
            TP+SLW KDLD   ++LD  ++   +E+  +L     EA  R  +  PK  R I      
Sbjct: 950  TPKSLWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPRKINKKEKN 1009

Query: 1074 XXXXXXXXXXTTQPSSSLATANTQPDVXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXGLQ 1253
                      ++  SS++ TA T P                                   
Sbjct: 1010 AETVTETTDISS--SSAMETAETAPAAVKPKGRGGSRKAKKDDSDDDDDEDFGIPDL--- 1064

Query: 1254 QNRLAAYNEDSSPDGS 1301
            + RLA YN DSSPD S
Sbjct: 1065 RERLAKYNLDSSPDHS 1080


>ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541274|gb|ESR52318.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1455

 Score =  414 bits (1064), Expect = e-112
 Identities = 210/354 (59%), Positives = 268/354 (75%), Gaps = 5/354 (1%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LLN E +EPM PWY+GF+GTIE TA+K++GVTYT+TGIIEEVN T
Sbjct: 843  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNET 902

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELPIR+WTQDY+EFLE ++  ND     FIR +++YS +  V FEVFLSEE+M  
Sbjct: 903  TLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDDTTVDFEVFLSEESMMR 958

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
             +QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF IR EFYEKRKK +L+
Sbjct: 959  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1018

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE EL++LENKVRFILGVVNGEI+VNNRKR +L  ELRQKGFTP  K+ K +E      
Sbjct: 1019 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1078

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
                E +E++P + +     DY+YL+SM IG+LTLE+VQ LL +RD+   EV +L+K TP
Sbjct: 1079 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1138

Query: 903  RSLWDKDLDEFILELDNLERIEASEDEKEL-----NSMNAEAARVFKLVPKHQR 1049
             SLW KDLD   ++LD L++ +A  +E+ +      + +A    V K  PK+ R
Sbjct: 1139 ESLWVKDLDALDMQLD-LDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKNAR 1191


>gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]
          Length = 1244

 Score =  413 bits (1061), Expect = e-112
 Identities = 211/354 (59%), Positives = 266/354 (75%), Gaps = 3/354 (0%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LLN E +EPM PWY+GFKG IE TA+K++GVTYT+TGIIEEV+ T
Sbjct: 844  IPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEAGVTYTITGIIEEVDET 903

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELP+R+WTQDY+EFLE ++TGND    PFI+++++YS +  V FEV L+EENM +
Sbjct: 904  TLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDDTTVEFEVILTEENMMV 959

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A+QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF +RFEFYEKRKK  L 
Sbjct: 960  AKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLD 1019

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE EL+++ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K  K + E A AG
Sbjct: 1020 NLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKTV-EVAVAG 1078

Query: 723  A--QVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKT 896
            A     ET E+           DY+YL+SM IGSLTLE+VQ L  +RD+ + EV +L+K 
Sbjct: 1079 ATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKA 1138

Query: 897  TPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAA-RVFKLVPKHQRTI 1055
            TP+SLW KDLD   ++LD  ++   +E+  +L     EA  R  +  PK  R I
Sbjct: 1139 TPKSLWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPRKI 1192


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score =  413 bits (1061), Expect = e-112
 Identities = 211/354 (59%), Positives = 266/354 (75%), Gaps = 3/354 (0%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LLN E +EPM PWY+GFKG IE TA+K++GVTYT+TGIIEEV+ T
Sbjct: 844  IPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEAGVTYTITGIIEEVDET 903

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELP+R+WTQDY+EFLE ++TGND    PFI+++++YS +  V FEV L+EENM +
Sbjct: 904  TLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDDTTVEFEVILTEENMMV 959

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A+QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF +RFEFYEKRKK  L 
Sbjct: 960  AKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLD 1019

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE EL+++ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K  K + E A AG
Sbjct: 1020 NLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKTV-EVAVAG 1078

Query: 723  A--QVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKT 896
            A     ET E+           DY+YL+SM IGSLTLE+VQ L  +RD+ + EV +L+K 
Sbjct: 1079 ATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKA 1138

Query: 897  TPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAA-RVFKLVPKHQRTI 1055
            TP+SLW KDLD   ++LD  ++   +E+  +L     EA  R  +  PK  R I
Sbjct: 1139 TPKSLWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPRKI 1192


>ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
            gi|300159507|gb|EFJ26127.1| hypothetical protein
            SELMODRAFT_98330 [Selaginella moellendorffii]
          Length = 1151

 Score =  410 bits (1054), Expect = e-111
 Identities = 196/315 (62%), Positives = 252/315 (80%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPRDIV N++HLL +EPLEPMDPWYKGFKGTI  +A+K+SGV+YT+TGI+E+VN T
Sbjct: 835  VPNYNPRDIVTNLKHLLRDEPLEPMDPWYKGFKGTIVKSASKESGVSYTVTGIVEQVNET 894

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            T+R+LELPIRKWTQDYKEFLE L+ G +KIKEP I+DY+E++T+ RV+FE+ LSEE M  
Sbjct: 895  TIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTRVHFEISLSEEKMAE 954

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A  EGL KKF+L+TTISTSNM+LFD+ G I+K+DTPEQIL++F+ IR E Y KRK+ +++
Sbjct: 955  ALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHIRLELYVKRKEVQVE 1014

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +L++EL++L+NKVRFILGVV GEI+VNNRKR EL  EL+ KGFTP  K  K  +     G
Sbjct: 1015 NLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPFPKKAKASDLPVVGG 1074

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
                   +D+  L+      DYEYL+SMPIG+LTLE+VQ L +ERD+ EG+V ELKK TP
Sbjct: 1075 DGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERDKLEGDVEELKKCTP 1134

Query: 903  RSLWDKDLDEFILEL 947
            + LW+KDLD F+ +L
Sbjct: 1135 KDLWEKDLDNFLEQL 1149


>ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
            gi|300137231|gb|EFJ04283.1| hypothetical protein
            SELMODRAFT_138946 [Selaginella moellendorffii]
          Length = 980

 Score =  410 bits (1054), Expect = e-111
 Identities = 196/315 (62%), Positives = 252/315 (80%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPRDIV N++HLL +EPLEPMDPWYKGFKGTI  +A+K+SGV+YT+TGI+E+VN T
Sbjct: 664  VPNYNPRDIVTNLKHLLRDEPLEPMDPWYKGFKGTIVKSASKESGVSYTVTGIVEQVNET 723

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            T+R+LELPIRKWTQDYKEFLE L+ G +KIKEP I+DY+E++T+ RV+FE+ LSEE M  
Sbjct: 724  TIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTRVHFEISLSEEKMAE 783

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A  EGL KKF+L+TTISTSNM+LFD+ G I+K+DTPEQIL++F+ IR E Y KRK+ +++
Sbjct: 784  ALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHIRLELYVKRKEVQVE 843

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +L++EL++L+NKVRFILGVV GEI+VNNRKR EL  EL+ KGFTP  K  K  +     G
Sbjct: 844  NLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPFPKKAKASDLPVVGG 903

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
                   +D+  L+      DYEYL+SMPIG+LTLE+VQ L +ERD+ EG+V ELKK TP
Sbjct: 904  DGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERDKLEGDVEELKKCTP 963

Query: 903  RSLWDKDLDEFILEL 947
            + LW+KDLD F+ +L
Sbjct: 964  KDLWEKDLDNFLEQL 978


>ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
            gi|300144129|gb|EFJ10815.1| hypothetical protein
            SELMODRAFT_127267 [Selaginella moellendorffii]
          Length = 1151

 Score =  409 bits (1050), Expect = e-111
 Identities = 196/315 (62%), Positives = 251/315 (79%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPRDIV N++HLL +E LEPMDPWYKGFKGTI  +ATK+SGV+YT+TGI+E+VN T
Sbjct: 835  VPNYNPRDIVTNLKHLLRDEQLEPMDPWYKGFKGTIVKSATKESGVSYTVTGIVEQVNET 894

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            T+R+LELPIRKWTQDYKEFLE L+ G +KIKEP I+DY+E++T+ RV+FE+ LSEE M  
Sbjct: 895  TIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTRVHFEISLSEEKMAE 954

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A  EGL KKF+L+TTISTSNM+LFD+ G I+K+DTPEQIL++F+ IR E Y KRK+ +++
Sbjct: 955  ALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHIRLELYVKRKEVQVE 1014

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +L++EL++L+NKVRFILGVV GEI+VNNRKR EL  EL+ KGFTP  K  K  +     G
Sbjct: 1015 NLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPFPKKAKASDLPVVGG 1074

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
                   +D+  L+      DYEYL+SMPIG+LTLE+VQ L +ERD+ EG+V ELKK TP
Sbjct: 1075 DGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERDKLEGDVEELKKCTP 1134

Query: 903  RSLWDKDLDEFILEL 947
            + LW+KDLD F+ +L
Sbjct: 1135 KDLWEKDLDNFLEQL 1149


>ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi|162679677|gb|EDQ66121.1|
            predicted protein [Physcomitrella patens]
          Length = 1172

 Score =  408 bits (1048), Expect = e-111
 Identities = 197/316 (62%), Positives = 253/316 (80%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPR+IVAN+R LL  + +EPM PWYKGFKG+IE +ATKDSG TYT+TG I++++ T
Sbjct: 847  VPNYNPREIVANLRRLLAGQEMEPMHPWYKGFKGSIECSATKDSGFTYTITGAIDQIDET 906

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            T++I ELP+RKWTQDYKEFL+V+MT +DK KEPFI+D++E++T+ +V+FE+ LSEENM I
Sbjct: 907  TIKISELPVRKWTQDYKEFLDVMMTPSDKNKEPFIKDFREHNTDTKVHFELSLSEENMAI 966

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A  EGL+KKF+LTTTISTSNMHLFD +GII+K+DTPEQIL+EFF IR + Y KRK  +LQ
Sbjct: 967  ALAEGLVKKFKLTTTISTSNMHLFDNKGIIKKYDTPEQILEEFFHIRLDMYVKRKAVQLQ 1026

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +LE+EL +++NKVRFILGVV GEIIVNNRKR +L A+L++KGFTP  K  K  +      
Sbjct: 1027 NLEYELHKVDNKVRFILGVVKGEIIVNNRKRADLLADLQKKGFTPFPKKSKSSDPPVVGA 1086

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
              + E +E D  +       DYEYL+SMPIG+LT E+VQ L  +RD+ EGEV ELKK TP
Sbjct: 1087 DPLPEDDEQDEKVKGIR-AADYEYLLSMPIGTLTFEKVQQLRGQRDKMEGEVEELKKATP 1145

Query: 903  RSLWDKDLDEFILELD 950
             +LW KDLDEF+++LD
Sbjct: 1146 EALWIKDLDEFLVKLD 1161


>ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi|162690273|gb|EDQ76641.1|
            predicted protein [Physcomitrella patens]
          Length = 1238

 Score =  407 bits (1045), Expect = e-110
 Identities = 203/342 (59%), Positives = 258/342 (75%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPR+IVANIR LL  + L PM PWYK F GTIE +ATKD G+TYT+TG IE+++ T
Sbjct: 848  VPNYNPREIVANIRRLLAGQELTPMHPWYKSFMGTIECSATKDIGLTYTITGTIEQIDET 907

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            T++ILELP+RKWTQDYKEFL+ LMT +DK KEPFI+D++E++T+ +V+FE+ LSEENM I
Sbjct: 908  TIKILELPVRKWTQDYKEFLDALMTPSDKNKEPFIKDFREHNTDTKVHFELTLSEENMAI 967

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A  EGL+KKF+LTTTISTSNMHLFD +GII+K+DTPEQIL+EFF IR + Y KRK  +LQ
Sbjct: 968  ALAEGLVKKFKLTTTISTSNMHLFDAKGIIKKYDTPEQILEEFFHIRLDLYVKRKAVQLQ 1027

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
            +L++ELV+++NKVRFILGVV GEIIVNNRKR +L +EL+ KGF P  K  K  +      
Sbjct: 1028 NLQYELVKVDNKVRFILGVVKGEIIVNNRKRIDLLSELQHKGFAPFPKKAKSPDPPVVGA 1087

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
              + E NE D  +     + DY+YL+SMPIGSLT E+VQ L  +RD+ E EV ELK+ TP
Sbjct: 1088 DPLPEDNEQDEKV-KGVKVADYDYLLSMPIGSLTYEKVQQLRGQRDKMEEEVEELKRATP 1146

Query: 903  RSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAARVFK 1028
             +LW KDLDEF+++LD  E  EA +   E      E  + FK
Sbjct: 1147 EALWIKDLDEFLVKLDAQEEQEAIDAVYEAKHSAKEGNQTFK 1188


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  406 bits (1044), Expect = e-110
 Identities = 225/441 (51%), Positives = 285/441 (64%), Gaps = 8/441 (1%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHT-ATKDSGVTYTLTGIIEEVNS 179
            +PNYNPRDI+AN+R LLN E +EPMDPWY+GF+GTIE T  TK   V YT+ GIIEEVN 
Sbjct: 847  IPNYNPRDIIANVRRLLNGEMMEPMDPWYRGFRGTIEKTDPTKQESVGYTVKGIIEEVNE 906

Query: 180  TTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMN 359
            TTLRI ELP+RKWTQDYKEFLE +MTGNDKIK+PFI+DYKE++ +  V+FEV +SEEN+ 
Sbjct: 907  TTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKEHNDDTTVHFEVIMSEENLL 966

Query: 360  IARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKL 539
            +A+QEGLL+KF+LTT ISTSNMHLFD  G I+K++TPEQIL+EFF +R EFYEKRK+  L
Sbjct: 967  MAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQILEEFFHLRLEFYEKRKRVLL 1026

Query: 540  QSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATA 719
             +LE EL++LENKVRFILGVV GEIIV+NRKR +L  EL QKGFTP  K  K +E A   
Sbjct: 1027 DNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFHELHQKGFTPFPKKSKSVEIAVAG 1086

Query: 720  GAQVGETNEDDPSLDDNNDLK--DYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKK 893
                 E  E++        ++  DYEYL+SM IG+LTLE+VQ L  +RD+    V +LKK
Sbjct: 1087 ATDDTEEAEENTDAVSKGGVRATDYEYLLSMAIGTLTLEKVQELCADRDKLNKGVDDLKK 1146

Query: 894  TTPRSLWDKDLDEFILELDNLERIEASEDE--KELNS--MNAEAARVFKLVPKHQRTIKX 1061
             TP++LW  DLD    ELD  ++ +A  +E  K+L S  M+    +V +  PK+ R  K 
Sbjct: 1147 ATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMSEAGMKVSRQAPKNPR--KN 1204

Query: 1062 XXXXXXXXXXXXXXTTQPSSSLATANTQPDVXXXXXXXXXXXXXXXXXMXXXXXXXXXXX 1241
                              SS++   +    V                 M           
Sbjct: 1205 NKKANNAEPAAETMDVSASSAMEMESVPEVVKPKGRAAPRKAPAKKKEMPTSVLKDEDDD 1264

Query: 1242 XGLQ-QNRLAAYNEDSSPDGS 1301
               + + RLAAYN +SSPDGS
Sbjct: 1265 EVHELKERLAAYNLESSPDGS 1285


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]
          Length = 1467

 Score =  403 bits (1035), Expect = e-109
 Identities = 206/358 (57%), Positives = 265/358 (74%), Gaps = 6/358 (1%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LL+ + + PMDPWY+GF GTIE T  K+SGV+YT  GIIEEV+ T
Sbjct: 814  IPNYNPRDIVANVRRLLDGDAMVPMDPWYRGFTGTIEKTV-KESGVSYTACGIIEEVSET 872

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            +LRI ELPIR+WTQDYKEFLE +  GNDK K+PFI  + ++S ++ V   V L EE +  
Sbjct: 873  SLRISELPIRRWTQDYKEFLESISEGNDKAKDPFIEGFTQHSDHSTVDIIVHLREEKLMA 932

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A+QEGLLKKF+LTT+ISTSNMHLFDR+G+I+K+DTPEQIL++FF +R EFYEKRKK  L+
Sbjct: 933  AKQEGLLKKFKLTTSISTSNMHLFDRKGVIKKYDTPEQILEDFFHLRLEFYEKRKKVLLE 992

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
             LE EL++LENKVRFILGVVNGEIIV+NRKR +L  EL+QKGFTP  K  K LE      
Sbjct: 993  DLELELLKLENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKALEPEVAGA 1052

Query: 723  AQVGETNED--DPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKT 896
             +  E  E+  + +++    + DYEYL+SM IG+LT+ERVQ+LL +RD+   EV EL+K+
Sbjct: 1053 TENTEDAEENSEAAIEKGARISDYEYLISMAIGTLTIERVQALLADRDKANAEVDELRKS 1112

Query: 897  TPRSLWDKDLDEFILELDNLERIEASEDEKELNS----MNAEAARVFKLVPKHQRTIK 1058
            TPRSLW KDLD   +ELD LE+ EA  +E +  +     N  A++  K  PK ++  K
Sbjct: 1113 TPRSLWLKDLDALEMELDVLEKSEALAEEAKKKARTQVKNVPASKASKQAPKPRKNTK 1170


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  402 bits (1034), Expect = e-109
 Identities = 202/354 (57%), Positives = 261/354 (73%), Gaps = 2/354 (0%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPRD+VAN+R LLN+EP+EPMDPWYKGFKGTIE TATK++G TYT+TGIIEEVN T
Sbjct: 843  VPNYNPRDLVANVRRLLNDEPMEPMDPWYKGFKGTIEKTATKEAGATYTVTGIIEEVNET 902

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELP+R+WT+DYK+FLE +   NDK K+PFI++ + Y   N V FEV +SEEN+ +
Sbjct: 903  TLRISELPVRRWTEDYKQFLESMTVSNDKAKDPFIKEVRAYGDENSVCFEVIMSEENLIL 962

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A+QEGLLKKF+L TTISTSNMHLFD  G I+K+D PE IL+EF+ +R E+YEKRKKA L+
Sbjct: 963  AQQEGLLKKFKLATTISTSNMHLFDSNGKIKKYDNPEDILEEFYHVRLEYYEKRKKALLE 1022

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
             LE EL+R+ENKV+FILGVV  EIIVNNRKR +L  EL++KGFTP  K  K+  EA  A 
Sbjct: 1023 ILELELLRIENKVKFILGVVKVEIIVNNRKRADLLLELKEKGFTPFPK--KKAVEAVVAD 1080

Query: 723  AQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTP 902
                +  + +  L+      DY+YL+SMPIG+LTLE+VQ L  ERD+  GEV +++  TP
Sbjct: 1081 TS-DDAEDSEEELNRGVRAGDYDYLLSMPIGTLTLEKVQELCAERDQLNGEVEDMRNATP 1139

Query: 903  RSLWDKDLDEFILELDNLER--IEASEDEKELNSMNAEAARVFKLVPKHQRTIK 1058
            + LW KDLD    +LD  ++  I+A E  +++      AA +    PK ++ +K
Sbjct: 1140 KLLWLKDLDVLEKQLDEQDKIDIQAEEAREKIKKKVMNAAGLKAPKPKPRKNVK 1193


>gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
          Length = 1471

 Score =  402 bits (1033), Expect = e-109
 Identities = 228/447 (51%), Positives = 287/447 (64%), Gaps = 8/447 (1%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYN RDIVAN+R LLN E + PMDPWY+GF GTIE T  K+SGV+YT+ G+IEE N T
Sbjct: 850  IPNYNTRDIVANVRRLLNGEAMVPMDPWYRGFSGTIEKTV-KESGVSYTVCGVIEEGNET 908

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            T+RI ELPIR+WTQDYKEFLE +  GNDK K+PFI  + ++S ++ V   V L EEN+  
Sbjct: 909  TVRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQHSDHSTVDIIVHLPEENLMA 968

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            ARQEGLLKKF+LTT+ISTSNMHLFD +G+I+K+DTPEQIL+EFF +R EFYEKRKK  L 
Sbjct: 969  ARQEGLLKKFKLTTSISTSNMHLFDPKGVIKKYDTPEQILEEFFHLRLEFYEKRKKVLLD 1028

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELE-EAATA 719
            +LE EL++LENKVRFIL VVNGEIIV+NR+R +L  EL+QKGFTP  K  K  E E A A
Sbjct: 1029 NLEMELLKLENKVRFILAVVNGEIIVSNRRRADLFLELQQKGFTPFPKKTKAQEPEVAGA 1088

Query: 720  GAQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKT 896
                 ET E+  S   N   + DYEYL+SM IG+LT+ERVQ+L  +RD+   EV EL+ +
Sbjct: 1089 IEDTEETEENSESASGNGARISDYEYLISMAIGTLTIERVQALCADRDKVNNEVAELRNS 1148

Query: 897  TPRSLWDKDLDEFILELDNLERIEASEDEKELNS----MNAEAARVFKLVPKHQRTIKXX 1064
            TPRSLW KDLD   +EL  LE+ EA  +E +  S     NA AA+V +  PK+ R  K  
Sbjct: 1149 TPRSLWLKDLDALEMELGELEKSEALAEEAKKKSRNQVKNAPAAKVSRPAPKNPR--KNN 1206

Query: 1065 XXXXXXXXXXXXXTTQPSSSLATANTQPDVXXXXXXXXXXXXXXXXXMXXXXXXXXXXXX 1244
                          T  SS +      P++                              
Sbjct: 1207 KKANNAEAAAESRETS-SSFVFEMEKAPEIVKRKVGAVAKKAPAGKKQAKSAVVLSDDDD 1265

Query: 1245 GLQQ--NRLAAYNEDSSPDGSVGNGSD 1319
             + +  +RLAAYN DSSP+ S G  ++
Sbjct: 1266 EVLELKDRLAAYNLDSSPENSAGKETE 1292


>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
          Length = 1469

 Score =  393 bits (1010), Expect = e-106
 Identities = 205/359 (57%), Positives = 262/359 (72%), Gaps = 7/359 (1%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVAN+R LLN + + PMDPWY+GF G IE T  K++G +YT  GIIEEVN T
Sbjct: 847  IPNYNPRDIVANVRRLLNGDEMVPMDPWYRGFTGFIEKTV-KETGTSYTACGIIEEVNET 905

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELPIR+WTQDYKEFLE +  GNDK K+PFI  + ++S ++ V   V L EEN+  
Sbjct: 906  TLRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQHSDHSTVEILVHLPEENLMA 965

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            AR+EGLLKKFRLTT+I+T+NMHLFD +G+I+K+DT EQIL+EFF +R EFYEKRKK  L 
Sbjct: 966  ARKEGLLKKFRLTTSIATTNMHLFDPKGVIKKYDTAEQILEEFFPLRLEFYEKRKKVLLD 1025

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELE-EAATA 719
            +LE EL+++ENKVRFILGVVNGEIIV+NRKR +L  EL+QKGFTP  K  K +E E A A
Sbjct: 1026 NLELELLKMENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKSVEPEVAGA 1085

Query: 720  GAQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKT 896
                 ET E+  ++  N   + DYEYL+SM IG+LT+ERV++LL +RD+   +V +L+ +
Sbjct: 1086 TEDTEETEENSETVISNGVRISDYEYLISMAIGTLTIERVEALLADRDKVNEQVNDLRGS 1145

Query: 897  TPRSLWDKDLDEFILELDNLERIEASEDEKELNS-----MNAEAARVFKLVPKHQRTIK 1058
            TP+SLW KDLD    EL+ LE+ EA  DE +  S      NA   +V K  PK ++  K
Sbjct: 1146 TPKSLWLKDLDVLEAELNELEKSEALADEAKRKSRNNQIKNAPVGKVSKQAPKPRKNTK 1204


>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550348289|gb|EEE83226.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1485

 Score =  392 bits (1008), Expect = e-106
 Identities = 206/358 (57%), Positives = 257/358 (71%), Gaps = 9/358 (2%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            +PNYNPRDIVANIR LLN E +EPM+PWY+GFKGTIE  A+K++G +YT+ G+I EVN T
Sbjct: 861  IPNYNPRDIVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASKEAGCSYTVNGVINEVNET 920

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGN-----DKIKEPFIRDYKEYSTNNRVYFEVFLSE 347
            TLRI ELPIR+WT DYK FL  +  GN     +  K+PFI+D+++Y  +  V FEV LSE
Sbjct: 921  TLRITELPIRRWTDDYKAFLNSVTEGNRDENGNLPKDPFIKDFRKYGDDATVVFEVLLSE 980

Query: 348  ENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRK 527
            ENM IA+QEGLLKKF+LTTTISTSNMHLFD  G+I+K+D PEQIL+EFF +R E+YE+RK
Sbjct: 981  ENMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPEQILEEFFHLRLEYYERRK 1040

Query: 528  KAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEE 707
            K  L++LEFEL++LENKVRFILGVV GEIIVNNRKR +L  EL QKGFTPI K  K    
Sbjct: 1041 KVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLFLELHQKGFTPIPKKSK---- 1096

Query: 708  AATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVEL 887
            A  AGA   +   +D          DY+YL+SM IG+LTLE+VQ L  + D+  GEV  L
Sbjct: 1097 AVVAGATDDKDEAEDSLEVSGVRASDYDYLLSMAIGTLTLEKVQQLCADHDKLNGEVDNL 1156

Query: 888  KKTTPRSLWDKDLDEFILELDNLERIEASEDE---KELNSMNAEAA-RVFKLVPKHQR 1049
            +KTTP  LW KDL+   ++LD L++ +A  +E   K     N EA  +V K  PK+ R
Sbjct: 1157 RKTTPIVLWVKDLEALEMQLDVLDKYDAEAEEARKKLKGDANGEAGFKVSKQAPKNPR 1214


>ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum tuberosum]
          Length = 1485

 Score =  390 bits (1001), Expect = e-105
 Identities = 190/329 (57%), Positives = 248/329 (75%), Gaps = 2/329 (0%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPRD+VAN+R LLN+E +EPMDPWYKGFKGTIE TATK++G TYT+TGIIEE + T
Sbjct: 844  VPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGTIEKTATKETGATYTVTGIIEEFSET 903

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELP+R+WT+DYK+FLE +    DK K+ FI++ + Y   N V FEV +SEEN+ +
Sbjct: 904  TLRISELPVRRWTEDYKQFLESMTVSTDKSKDAFIKEVRAYGDENSVCFEVIMSEENLLL 963

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A+QEGLLKKF+LTTTISTSNMHLFD +G I+K+D PE+IL+EF+ +R E+YEKRKK  L+
Sbjct: 964  AQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYEKRKKTLLE 1023

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
             LE EL+R+ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K +K +E      
Sbjct: 1024 ILELELLRIENKVRFILGVVKGEIIVNNRKRADLLLELKNKGFTPFPK-KKPVEAVVADS 1082

Query: 723  AQVGETNEDDPSLDDNNDLK--DYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKT 896
                E +E+ P  + N  ++  DY+YL+SM IG+LTLE+VQ L  +RD+   EV +++  
Sbjct: 1083 TDDAEDSEESPE-ESNKGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNAEVEDMRNA 1141

Query: 897  TPRSLWDKDLDEFILELDNLERIEASEDE 983
            TP+ LW KDLD    +LD  ++++   +E
Sbjct: 1142 TPKDLWMKDLDVLDKQLDEQDKLDIQTEE 1170


>ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum lycopersicum]
          Length = 1477

 Score =  390 bits (1001), Expect = e-105
 Identities = 196/355 (55%), Positives = 256/355 (72%), Gaps = 3/355 (0%)
 Frame = +3

Query: 3    VPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNST 182
            VPNYNPRD+VAN+R LLN+E +EPMDPWYKGFKG IE TATK++G TYT+TGIIEEV+ T
Sbjct: 844  VPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGKIEKTATKETGATYTVTGIIEEVSET 903

Query: 183  TLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNI 362
            TLRI ELP+R+WT+DYK+FLE +    DK K+ FI++ + Y   N V FEV +SE+N+ +
Sbjct: 904  TLRISELPVRRWTEDYKQFLESMTVSTDKAKDSFIKEVRAYGDENSVCFEVIMSEDNLLL 963

Query: 363  ARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQ 542
            A+QEGLLKKF+LTTTISTSNMHLFD +G I+K+D PE+IL+EF+ +R E+YEKRKKA L+
Sbjct: 964  AQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYEKRKKALLE 1023

Query: 543  SLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAG 722
             LE EL+R+ENKV+FILGVV GEIIVNNRKR EL  EL+ KGFTP  K +K +E      
Sbjct: 1024 ILELELLRIENKVKFILGVVKGEIIVNNRKRAELLLELKNKGFTPFPK-KKPVEAVVADS 1082

Query: 723  AQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTT 899
                + +E+ P          DY+YL+SM IG+LTLE+VQ L  +RD+   EV +++  T
Sbjct: 1083 TDDADDSEESPEESSRGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNAEVEDMRNAT 1142

Query: 900  PRSLWDKDLDEFILELDNLERIEASEDE--KELNSMNAEAARVFKLVPKHQRTIK 1058
            P+ LW KDLD    +LD  ++I+   +E  ++L      AA      PK ++T K
Sbjct: 1143 PKHLWMKDLDVLDKQLDEQDKIDIQTEEAREKLKKKVMNAAGKAAPKPKPRKTNK 1197