BLASTX nr result
ID: Ephedra27_contig00007694
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00007694
(999 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006852918.1| hypothetical protein AMTR_s00033p00230080 [A... 152 2e-34
ref|XP_004978557.1| PREDICTED: double-stranded RNA-binding prote... 147 6e-33
ref|XP_004977603.1| PREDICTED: double-stranded RNA-binding prote... 147 8e-33
ref|XP_002442665.1| hypothetical protein SORBIDRAFT_08g000900 [S... 145 3e-32
gb|EOY15469.1| DsRNA-binding domain-like superfamily protein iso... 144 5e-32
ref|NP_001065557.1| Os11g0109900 [Oryza sativa Japonica Group] g... 144 7e-32
gb|EOY15468.1| DsRNA-binding domain-like superfamily protein iso... 143 1e-31
gb|AAY21792.1| dsRNA binding protein RBP [Oryza sativa Japonica ... 143 1e-31
ref|NP_001065960.1| Os12g0109900 [Oryza sativa Japonica Group] g... 143 1e-31
gb|AFJ79549.1| double stranded RNA binding protein 1-1 [Oryza sa... 142 2e-31
gb|EMJ24068.1| hypothetical protein PRUPE_ppa004305mg [Prunus pe... 142 3e-31
ref|NP_001055156.1| Os05g0307400 [Oryza sativa Japonica Group] g... 142 3e-31
gb|ESW08320.1| hypothetical protein PHAVU_009G036100g [Phaseolus... 141 5e-31
ref|XP_002307335.2| hypothetical protein POPTR_0005s19650g [Popu... 139 2e-30
ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding prote... 139 2e-30
gb|ACU19095.1| unknown [Glycine max] 139 2e-30
ref|XP_006472449.1| PREDICTED: double-stranded RNA-binding prote... 138 4e-30
ref|XP_006433812.1| hypothetical protein CICLE_v10001318mg [Citr... 138 4e-30
ref|XP_004501656.1| PREDICTED: double-stranded RNA-binding prote... 138 4e-30
ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula] ... 137 5e-30
>ref|XP_006852918.1| hypothetical protein AMTR_s00033p00230080 [Amborella trichopoda]
gi|548856532|gb|ERN14385.1| hypothetical protein
AMTR_s00033p00230080 [Amborella trichopoda]
Length = 392
Score = 152 bits (384), Expect = 2e-34
Identities = 93/284 (32%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Frame = +2
Query: 152 GTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRX 331
G S + KS+L EY QKA +P PVY+++KEGPSHEPIF++SV +N + Y+ F NR
Sbjct: 50 GVSNCYVFKSRLQEYAQKAGIPTPVYETVKEGPSHEPIFRSSVTINDVKYDSLPGFANRK 109
Query: 332 XXXXXXXXXXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGN 511
V+ +GLCKNLLQEY+QK++ VPSY C + N
Sbjct: 110 AAEQSAAEVALMELLKSGTMDCIPHPVHETGLCKNLLQEYAQKMSYSVPSYTCTRDSNSN 169
Query: 512 EAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVMGQQHNVPLGSSAVAVDPKSESV 691
+ FVCTVEI G Y+GG A++KK+A +KAARTAL + ++ S +V
Sbjct: 170 ISSFVCTVEIGGIQYIGGAAKTKKEAEIKAARTALLAIQSNNSETSNSGSVYTVLPGNKK 229
Query: 692 DATNNKRPHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGAKEPEAEQTTN------ 853
+ ++ R A K KK+K+ K ++ E E T+
Sbjct: 230 EKVSDGRSETPAP--LKTKKKKSKFKKGSQRRHPRFKGGLKVSENEQEKLGPTDGSIVKT 287
Query: 854 ---DDDANKETLSQDEKHKQEGTDILKSKMNGENSSPHKNDEDK 976
D E + D +H + D ++ NGE +++ +K
Sbjct: 288 EGFGDVVGAEARANDREHLK--PDEAVTRENGERCHQLEHETEK 329
>ref|XP_004978557.1| PREDICTED: double-stranded RNA-binding protein 7-like [Setaria
italica]
Length = 469
Score = 147 bits (371), Expect = 6e-33
Identities = 86/204 (42%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Frame = +2
Query: 176 KSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAF--RNRXXXXXXX 349
KS+L EY QKA LP P Y ++KEGPSHEPIFK++V+VN Y+ F R
Sbjct: 55 KSRLQEYAQKAGLPTPEYHTLKEGPSHEPIFKSTVVVNNTKYDSLPGFFSRKAAEQSAAE 114
Query: 350 XXXXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGNEAKFVC 529
+K+ +V +GLCKNLLQEY+QK+N +PSY C K G A F+C
Sbjct: 115 VALMEIVKSVPATEAKNIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKQASG-VAPFIC 173
Query: 530 TVEIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDPKSESVDATNN 706
TVEI G Y+G AR+KK+A +KAARTAL + GQ G++ V P V T+
Sbjct: 174 TVEIGGIQYIGAAARTKKEAEIKAARTALLAIQGQSEGCANGATKYIVVPGQREVKETDK 233
Query: 707 KRPH-------NDADGGKKFKKRK 757
K + G KK+ KRK
Sbjct: 234 KPTETPKSLKVKKSGGRKKWNKRK 257
>ref|XP_004977603.1| PREDICTED: double-stranded RNA-binding protein 8-like [Setaria
italica]
Length = 447
Score = 147 bits (370), Expect = 8e-33
Identities = 89/220 (40%), Positives = 114/220 (51%), Gaps = 10/220 (4%)
Frame = +2
Query: 128 VAVAEHNKGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYEC 307
VA A + KS+L EY QKA LP P Y ++KEGPSHEP+FK++V+VN Y+
Sbjct: 21 VAAAPTGIRVENCYVFKSRLQEYAQKAGLPTPEYHTLKEGPSHEPVFKSTVVVNNTKYDS 80
Query: 308 PSAF--RNRXXXXXXXXXXXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPS 481
F R +K +V +GLCKNLLQEY+QK+N +PS
Sbjct: 81 LPGFFSRKAAEQSAAEVALMEIVKSVPPTETKSIPAVQETGLCKNLLQEYAQKMNYAIPS 140
Query: 482 YKCVKTGEGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSS 658
Y C K G A FVCTVEI G Y+G AR+KK+A +KAARTAL + GQ G++
Sbjct: 141 YICTKQASG-VAPFVCTVEIGGIQYIGAAARTKKEAEIKAARTALLAIQGQSEGCGNGAT 199
Query: 659 AVAVDPKSESVDATNNKRPH-------NDADGGKKFKKRK 757
V P V T+ K + G KK+ KRK
Sbjct: 200 KYIVVPGQREVKETDKKPTETPKSLKVKKSGGRKKWNKRK 239
>ref|XP_002442665.1| hypothetical protein SORBIDRAFT_08g000900 [Sorghum bicolor]
gi|241943358|gb|EES16503.1| hypothetical protein
SORBIDRAFT_08g000900 [Sorghum bicolor]
Length = 394
Score = 145 bits (365), Expect = 3e-32
Identities = 86/205 (41%), Positives = 109/205 (53%), Gaps = 8/205 (3%)
Frame = +2
Query: 176 KSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAF--RNRXXXXXXX 349
KS+L EY QKA LP P Y ++KEGPSHEP+FK++V+VN TYE F R
Sbjct: 39 KSRLQEYAQKAGLPTPEYHTLKEGPSHEPVFKSTVLVNNTTYESLPGFFSRKAAEQSAAE 98
Query: 350 XXXXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGNEAKFVC 529
++ +V +GLCKNLLQEY+QK+N +PSY C K G A F+C
Sbjct: 99 VALMEIAMSAPVAETRSIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKQASG-VAPFIC 157
Query: 530 TVEIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDPKSESVDATNN 706
TVEI G Y+G AR+KK+A +KAARTAL + GQ G+ V P V T+
Sbjct: 158 TVEIGGIQYIGAAARTKKEAEIKAARTALLAIQGQSEGCANGAKKYIVVPGQRPVKETDK 217
Query: 707 K-----RPHNDADGGKKFKKRKANL 766
K +P G K K K L
Sbjct: 218 KPTETPKPLKVKKRGSKRKWNKKKL 242
>gb|EOY15469.1| DsRNA-binding domain-like superfamily protein isoform 2 [Theobroma
cacao]
Length = 377
Score = 144 bits (363), Expect = 5e-32
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Frame = +2
Query: 140 EHNKGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAF 319
E+ G S + KS+L EY QK LP PVY++IKEGPSHEP F+++VIVN + Y+ F
Sbjct: 5 ENFSGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPSFRSAVIVNDVRYDSLPGF 64
Query: 320 RNRXXXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVK 496
NR ++ + V+ +GLCKNLLQEY+QK+N +P Y+C+K
Sbjct: 65 FNRKAAEQSAAEVALMELSKSGEVNQSISQPVHETGLCKNLLQEYAQKMNYAIPVYQCLK 124
Query: 497 -TGEGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVMG----QQHNVPLGSSA 661
G F CTVEI G Y+G AR+KK+A +KAARTAL + + N +G+S
Sbjct: 125 DEAPGRGPHFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIQSSTLELSNKVVGNSQ 184
Query: 662 VAVDP-KSESVDATNNKRPHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXE-----IGA 823
+ V P + +++ +N + KK + +K LK + +G
Sbjct: 185 LTVIPCRKRAMETASNPEEAVNVPKAKKTRFKKKMLKAKLSGNSVDHSQDKSTGNSAVGM 244
Query: 824 KEPEAEQTTNDDDANKETLSQD 889
+P + + + ETL+ +
Sbjct: 245 DDPVKSEWVQTNSLSSETLATE 266
>ref|NP_001065557.1| Os11g0109900 [Oryza sativa Japonica Group]
gi|122221791|sp|Q0IV63.1|DRB7_ORYSJ RecName:
Full=Double-stranded RNA-binding protein 7; AltName:
Full=dsRNA-binding protein 7 gi|108863922|gb|ABG22335.1|
Double-stranded RNA binding motif family protein,
expressed [Oryza sativa Japonica Group]
gi|113644261|dbj|BAF27402.1| Os11g0109900 [Oryza sativa
Japonica Group] gi|215686684|dbj|BAG88937.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215768461|dbj|BAH00690.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|387538567|gb|AFJ79552.1| double stranded RNA binding
protein 1-2 [Oryza sativa Indica Group]
Length = 473
Score = 144 bits (362), Expect = 7e-32
Identities = 84/202 (41%), Positives = 110/202 (54%), Gaps = 8/202 (3%)
Frame = +2
Query: 176 KSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRXXXXXXXXX 355
KS+L EY QKA L P Y + KEGPSHEP+FK++V++N +Y+ F NR
Sbjct: 35 KSRLQEYAQKAGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAE 94
Query: 356 XXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGNEAKFVCTV 535
+ + +V +GLCKNLLQEY+QK+N +PSY C K+ G A F+CTV
Sbjct: 95 VALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKSASG-LAPFICTV 153
Query: 536 EIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDP-----KSESVDA 697
EI G Y+G AR+KKDA +KAARTAL + GQ G++ V P K
Sbjct: 154 EIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVPGKRVGKEVEKMP 213
Query: 698 TNNKRPHNDADGG--KKFKKRK 757
+P GG KK+ KRK
Sbjct: 214 IETPKPLKIKKGGFKKKWNKRK 235
>gb|EOY15468.1| DsRNA-binding domain-like superfamily protein isoform 1 [Theobroma
cacao]
Length = 401
Score = 143 bits (360), Expect = 1e-31
Identities = 88/258 (34%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Frame = +2
Query: 152 GTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRX 331
G S + KS+L EY QK LP PVY++IKEGPSHEP F+++VIVN + Y+ F NR
Sbjct: 33 GVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPSFRSAVIVNDVRYDSLPGFFNRK 92
Query: 332 XXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVK-TGE 505
++ + V+ +GLCKNLLQEY+QK+N +P Y+C+K
Sbjct: 93 AAEQSAAEVALMELSKSGEVNQSISQPVHETGLCKNLLQEYAQKMNYAIPVYQCLKDEAP 152
Query: 506 GNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVMG----QQHNVPLGSSAVAVD 673
G F CTVEI G Y+G AR+KK+A +KAARTAL + + N +G+S + V
Sbjct: 153 GRGPHFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIQSSTLELSNKVVGNSQLTVI 212
Query: 674 P-KSESVDATNNKRPHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXE-----IGAKEPE 835
P + +++ +N + KK + +K LK + +G +P
Sbjct: 213 PCRKRAMETASNPEEAVNVPKAKKTRFKKKMLKAKLSGNSVDHSQDKSTGNSAVGMDDPV 272
Query: 836 AEQTTNDDDANKETLSQD 889
+ + + ETL+ +
Sbjct: 273 KSEWVQTNSLSSETLATE 290
>gb|AAY21792.1| dsRNA binding protein RBP [Oryza sativa Japonica Group]
Length = 410
Score = 143 bits (360), Expect = 1e-31
Identities = 85/232 (36%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Frame = +2
Query: 176 KSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRXXXXXXXXX 355
KS+L EY QK L P Y + KEGPSHEP+FK++V++N +Y+ F NR
Sbjct: 35 KSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAE 94
Query: 356 XXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGNEAKFVCTV 535
+ + +V +GLCKNLLQEY+QK+N +PSY C K+ G A F+CTV
Sbjct: 95 VALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKSASG-LAPFICTV 153
Query: 536 EIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDPKSESVDATNNKR 712
EI G Y+G AR+KKDA +KAARTAL + GQ G++ V P + V KR
Sbjct: 154 EIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVP-GKRVGKEVEKR 212
Query: 713 PHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGAKEPEAEQTTNDDDAN 868
P + K K +K K + + ++ EA + D++
Sbjct: 213 P---IETPKPLKVKKGGFKKKWNKRKFMKKDGQAVDVEKDEARVAGDAHDSD 261
>ref|NP_001065960.1| Os12g0109900 [Oryza sativa Japonica Group]
gi|122234185|sp|Q0IQN6.1|DRB8_ORYSJ RecName:
Full=Double-stranded RNA-binding protein 8; AltName:
Full=dsRNA-binding protein 1; Short=OsDRB1; AltName:
Full=dsRNA-binding protein 8 gi|108862090|gb|ABG21849.1|
Double-stranded RNA binding motif family protein,
expressed [Oryza sativa Japonica Group]
gi|113648467|dbj|BAF28979.1| Os12g0109900 [Oryza sativa
Japonica Group]
Length = 424
Score = 143 bits (360), Expect = 1e-31
Identities = 85/232 (36%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Frame = +2
Query: 176 KSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRXXXXXXXXX 355
KS+L EY QK L P Y + KEGPSHEP+FK++V++N +Y+ F NR
Sbjct: 35 KSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAE 94
Query: 356 XXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGNEAKFVCTV 535
+ + +V +GLCKNLLQEY+QK+N +PSY C K+ G A F+CTV
Sbjct: 95 VALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKSASG-LAPFICTV 153
Query: 536 EIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDPKSESVDATNNKR 712
EI G Y+G AR+KKDA +KAARTAL + GQ G++ V P + V KR
Sbjct: 154 EIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVP-GKRVGKEVEKR 212
Query: 713 PHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGAKEPEAEQTTNDDDAN 868
P + K K +K K + + ++ EA + D++
Sbjct: 213 P---IETPKPLKVKKGGFKKKWNKRKFMKKDGQAVDVEKDEARVAGDAHDSD 261
>gb|AFJ79549.1| double stranded RNA binding protein 1-1 [Oryza sativa Indica Group]
Length = 377
Score = 142 bits (359), Expect = 2e-31
Identities = 86/232 (37%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Frame = +2
Query: 176 KSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRXXXXXXXXX 355
KS+L EY QKA L P Y + KEGPSHEP+FK++V++N +Y F NR
Sbjct: 37 KSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINNTSYGSLPGFSNRKAAEQSAAE 96
Query: 356 XXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGNEAKFVCTV 535
+ + +V +GLCKNLLQEY+QK+N +PSY C K G A F+CTV
Sbjct: 97 VALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKPASG-LAPFICTV 155
Query: 536 EIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDPKSESVDATNNKR 712
EI G Y+G AR+KKDA +KAARTAL + GQ G++ V P + V KR
Sbjct: 156 EIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVP-GKRVGKEVEKR 214
Query: 713 PHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGAKEPEAEQTTNDDDAN 868
P + K K +K K + + ++ EA + D++
Sbjct: 215 P---IETPKPLKAKKGGFKKKWNKRKFMKKDGQAVDVEKDEARVAGDAHDSD 263
>gb|EMJ24068.1| hypothetical protein PRUPE_ppa004305mg [Prunus persica]
Length = 517
Score = 142 bits (357), Expect = 3e-31
Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 7/223 (3%)
Frame = +2
Query: 128 VAVAEHNKGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYEC 307
+A E +G S + KSQL EY QK +P PVY++IKEGPSHEP FK++VIVN + Y+
Sbjct: 1 MATNEGFQGVSNCYVFKSQLQEYAQKVEIPTPVYETIKEGPSHEPSFKSTVIVNNVRYDS 60
Query: 308 PSAFRNRXXXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSY 484
F NR ++ + ++ +GLCKNLLQEY+QK+N +P Y
Sbjct: 61 LLGFSNRKLAEQSAAEVALVELAKSGDINQSISQPIHETGLCKNLLQEYAQKMNYAIPLY 120
Query: 485 KCVK-TGEGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVM----GQQHNVPL 649
+C K G F CTVEI G YVG A++KK+A +K ARTAL + + P+
Sbjct: 121 QCQKEETPGRVPLFSCTVEIGGIRYVGAAAKTKKEAEIKVARTALLAIRSSKSESSMEPV 180
Query: 650 GSSAVAVDPKSESVDATNNKRPHN-DADGGKKFKKRKANLKPR 775
G++ + V P + +N K + KK + +K N K +
Sbjct: 181 GNTQLTVLPSKKRRAESNTKSEETANVPKPKKGRFKKRNFKKK 223
>ref|NP_001055156.1| Os05g0307400 [Oryza sativa Japonica Group]
gi|122169278|sp|Q0DJA3.1|DRB3_ORYSJ RecName:
Full=Double-stranded RNA-binding protein 3; AltName:
Full=dsRNA-binding protein 3
gi|113578707|dbj|BAF17070.1| Os05g0307400 [Oryza sativa
Japonica Group] gi|215704133|dbj|BAG92973.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 437
Score = 142 bits (357), Expect = 3e-31
Identities = 86/232 (37%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Frame = +2
Query: 176 KSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRXXXXXXXXX 355
KS+L EY QKA L P Y + KEGPSHEP+FK++V++N +Y F NR
Sbjct: 37 KSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINNTSYGSLPGFSNRKAAEQSAAE 96
Query: 356 XXXXXXXXXXXXSKDTDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEGNEAKFVCTV 535
+ + +V +GLCKNLLQEY+QK+N +PSY C K G A F+CTV
Sbjct: 97 VALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKPASG-LAPFLCTV 155
Query: 536 EIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDPKSESVDATNNKR 712
EI G Y+G AR+KKDA +KAARTAL + GQ G++ V P + V KR
Sbjct: 156 EIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVP-GKRVGKEVEKR 214
Query: 713 PHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGAKEPEAEQTTNDDDAN 868
P + K K +K K + + ++ EA + D++
Sbjct: 215 P---IETPKPLKAKKGGFKKKWNKRKFMKKDGQAVDVEKDEARVAGDAHDSD 263
>gb|ESW08320.1| hypothetical protein PHAVU_009G036100g [Phaseolus vulgaris]
Length = 353
Score = 141 bits (355), Expect = 5e-31
Identities = 99/282 (35%), Positives = 140/282 (49%), Gaps = 18/282 (6%)
Frame = +2
Query: 149 KGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNR 328
+G S + KS+L EY QKA LP PVY+++KEGPSHEP F+++VIVN + Y+ F NR
Sbjct: 8 QGVSNCYVFKSRLQEYAQKAGLPTPVYETVKEGPSHEPSFRSTVIVNDVRYDSLPGFSNR 67
Query: 329 XXXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVK-TG 502
++ T V+ +GLCKNLLQEY+QK+N +P Y+C K
Sbjct: 68 KAAEQSAAEVALVELAKSNVVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDET 127
Query: 503 EGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVMGQQHNVPLGSSAVAVDPK- 679
G + F CTV+I G Y+GG A++KK+A +KAARTAL + Q + S PK
Sbjct: 128 PGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAI--QSSATHASQNQVGHPKL 185
Query: 680 ---------SESV---DATNNKRPHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGA 823
+ESV D +N A +K KRK PR IG
Sbjct: 186 TVLPCRKRVAESVSIADENSNTPKPKKARFKRKSSKRK---NPRDKIGPIHTENVVGIGT 242
Query: 824 K---EPEAEQTTNDDDANKETLSQDEKHKQEGTDILKSKMNG 940
E E + + ND+ E K ++ ++++K+ NG
Sbjct: 243 NINHEVETQASVNDESGVHEM-----KSEKFTSEVMKNLENG 279
>ref|XP_002307335.2| hypothetical protein POPTR_0005s19650g [Populus trichocarpa]
gi|550339340|gb|EEE94331.2| hypothetical protein
POPTR_0005s19650g [Populus trichocarpa]
Length = 355
Score = 139 bits (350), Expect = 2e-30
Identities = 83/209 (39%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Frame = +2
Query: 152 GTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRX 331
G S + KS+L EY QKA LP PVY++IKEGPSHEP F+++VIV + Y+ F NR
Sbjct: 9 GVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVKEVRYDSLPGFFNRK 68
Query: 332 XXXXXXXXXXXXXXXXXXXXSKDTDS-VYASGLCKNLLQEYSQKLNLPVPSYKCVK-TGE 505
++ T V+ +GLCKNLLQEY+QK+N +P Y+C K
Sbjct: 69 AAEQSAAEVALVELAKAGQINESTSQPVHETGLCKNLLQEYAQKMNYAIPLYECQKDETP 128
Query: 506 GNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALY-VMGQQHNVPLGSSAVAVDPKS 682
G F CTVEI G Y+G A++KK+A +KAARTAL + + P G+S + V P
Sbjct: 129 GRGLVFKCTVEIGGIRYIGASAKTKKEAEIKAARTALLAIQSSGSDKPSGNSQLTVIPCR 188
Query: 683 ESVDATNNKRPHNDADGGKKFKKRKANLK 769
+ T+ + + KK + +K LK
Sbjct: 189 KRGVETSVQEEMANIPKPKKARFKKKRLK 217
>ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
[Glycine max]
Length = 359
Score = 139 bits (350), Expect = 2e-30
Identities = 95/263 (36%), Positives = 131/263 (49%), Gaps = 14/263 (5%)
Frame = +2
Query: 140 EHNKGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAF 319
E + S + KS+L EY QKA LP PVY++IKEGPSHEP F+++VIVN + Y+ F
Sbjct: 5 EDFQSVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGF 64
Query: 320 RNRXXXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVK 496
NR ++ T V+ +GLCKNLLQEY+QK+N +P Y+C K
Sbjct: 65 FNRKAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKK 124
Query: 497 -TGEGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVM----GQQHNVPLGSSA 661
G + F CTV+I G Y+GG A++KK+A +KAARTAL + Q +G
Sbjct: 125 DETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQASQDQVGHPQ 184
Query: 662 VAVDP----KSESVD-ATNNKRPHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGAK 826
+ V P +ESV A N P +FK++ + KP IGA
Sbjct: 185 LTVLPCRKRATESVAIADENSNPPKPKKA--RFKRKSSKRKPSRDKMGQIHTENLGIGAN 242
Query: 827 ---EPEAEQTTNDDDANKETLSQ 886
E E + N + E S+
Sbjct: 243 INHEVETHASVNGESGVLEKKSE 265
>gb|ACU19095.1| unknown [Glycine max]
Length = 359
Score = 139 bits (350), Expect = 2e-30
Identities = 95/263 (36%), Positives = 131/263 (49%), Gaps = 14/263 (5%)
Frame = +2
Query: 140 EHNKGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAF 319
E + S + KS+L EY QKA LP PVY++IKEGPSHEP F+++VIVN + Y+ F
Sbjct: 5 EDFQSVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGF 64
Query: 320 RNRXXXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVK 496
NR ++ T V+ +GLCKNLLQEY+QK+N +P Y+C K
Sbjct: 65 FNRKAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKK 124
Query: 497 -TGEGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVM----GQQHNVPLGSSA 661
G + F CTV+I G Y+GG A++KK+A +KAARTAL + Q +G
Sbjct: 125 DETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQASQDQVGHPQ 184
Query: 662 VAVDP----KSESVD-ATNNKRPHNDADGGKKFKKRKANLKPRXXXXXXXXXXXXEIGAK 826
+ V P +ESV A N P +FK++ + KP IGA
Sbjct: 185 LTVLPCRKRATESVAIADENSNPPKPKKA--RFKRKSSKRKPSRDKMGQIHTENLGIGAN 242
Query: 827 ---EPEAEQTTNDDDANKETLSQ 886
E E + N + E S+
Sbjct: 243 INHEVETHASVNGESGVLEKKSE 265
>ref|XP_006472449.1| PREDICTED: double-stranded RNA-binding protein 1-like [Citrus
sinensis]
Length = 418
Score = 138 bits (347), Expect = 4e-30
Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 6/212 (2%)
Frame = +2
Query: 152 GTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRX 331
G S + KS+L EY QKA +P PVY++IKEGPSHEP F+++VIV+ + Y+ F NR
Sbjct: 9 GVSNCYVFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDSLPGFFNRK 68
Query: 332 XXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEG 508
++ + ++ +GLCKNLLQEY+QK+N +P Y+C K
Sbjct: 69 AAEQSAAEVALVELAKLGKVNECISQPIHETGLCKNLLQEYAQKMNYAIPLYQCRKDEAS 128
Query: 509 NEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVMGQQHNVPLGSSA-----VAVD 673
+ +F CTVEI Y+GG A++KK+A +KAARTAL + + G+SA +
Sbjct: 129 GKVQFSCTVEIGDIRYIGGAAKTKKEAEIKAARTALLAIQSSASELSGNSAGNTQLTVLP 188
Query: 674 PKSESVDATNNKRPHNDADGGKKFKKRKANLK 769
+ + NN + KK + +K LK
Sbjct: 189 SRKRGPEVANNPEETVNVPKAKKGRFKKKILK 220
>ref|XP_006433812.1| hypothetical protein CICLE_v10001318mg [Citrus clementina]
gi|557535934|gb|ESR47052.1| hypothetical protein
CICLE_v10001318mg [Citrus clementina]
Length = 413
Score = 138 bits (347), Expect = 4e-30
Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 6/212 (2%)
Frame = +2
Query: 152 GTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAFRNRX 331
G S + KS+L EY QKA +P PVY++IKEGPSHEP F+++VIV+ + Y+ F NR
Sbjct: 9 GVSNCYVFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDSLPGFFNRK 68
Query: 332 XXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVKTGEG 508
++ + ++ +GLCKNLLQEY+QK+N +P Y+C K
Sbjct: 69 AAEQSAAEVALVELAKLGKVNECISQPIHETGLCKNLLQEYAQKMNYAIPLYQCRKDEAS 128
Query: 509 NEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVMGQQHNVPLGSSA-----VAVD 673
+ +F CTVEI Y+GG A++KK+A +KAARTAL + + G+SA +
Sbjct: 129 GKVQFSCTVEIGDIRYIGGAAKTKKEAEIKAARTALLAIQSSASELSGNSAGNTQLTVLP 188
Query: 674 PKSESVDATNNKRPHNDADGGKKFKKRKANLK 769
+ + NN + KK + +K LK
Sbjct: 189 SRKRGPEVANNPEETVNVPKAKKGRFKKKILK 220
>ref|XP_004501656.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
[Cicer arietinum] gi|502133119|ref|XP_004501657.1|
PREDICTED: double-stranded RNA-binding protein 1-like
isoform X2 [Cicer arietinum]
Length = 355
Score = 138 bits (347), Expect = 4e-30
Identities = 101/278 (36%), Positives = 139/278 (50%), Gaps = 11/278 (3%)
Frame = +2
Query: 140 EHNKGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAF 319
E +G S + KS++ EY QKA LP PVY++IKEGPSHEP F+++VIVN + Y+ F
Sbjct: 5 EDFQGVSNCYVFKSRVQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGF 64
Query: 320 RNRXXXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVK 496
NR ++ T V+ +GLCKNLLQEY+QK+N +P+Y C K
Sbjct: 65 FNRKAAEQSAAEVALVELAKSGEVNQSVTLPVHETGLCKNLLQEYAQKMNYAMPTYHCKK 124
Query: 497 -TGEGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVMGQQHNVPLGS----SA 661
G F CTV+I G Y+GG ++KK+A +KAARTAL + Q N S
Sbjct: 125 DETPGRTTLFSCTVDIGGILYIGGMTKTKKEAEIKAARTALLAI--QTNASQASQNQFGY 182
Query: 662 VAVDPKSESVDATNNKRPHNDADGGKK--FKKRKANLKPRXXXXXXXXXXXXEIGAK-EP 832
+ V P + AT++ ++A KK FK++ KP IGA P
Sbjct: 183 LTVIPSRKR--ATDSVAVVDEASKPKKARFKRKFPKRKPSRDKKRHILTDNAGIGANINP 240
Query: 833 EAEQ--TTNDDDANKETLSQDEKHKQEGTDILKSKMNG 940
E T ND+ ET S+ E +K+ NG
Sbjct: 241 GVESLVTVNDESGLHETKSEAAAFPSEA---MKNYENG 275
>ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula]
gi|355491942|gb|AES73145.1| DsRNA-binding protein
[Medicago truncatula]
Length = 780
Score = 137 bits (346), Expect = 5e-30
Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 12/288 (4%)
Frame = +2
Query: 140 EHNKGTSKMILAKSQLLEYTQKASLPAPVYQSIKEGPSHEPIFKASVIVNGITYECPSAF 319
E +G S + KSQL EY QKA L PVY++ KEGPSHEP F+++VI+N + Y+ + F
Sbjct: 6 EDFQGVSNCYVFKSQLQEYAQKAGLGTPVYETTKEGPSHEPSFRSTVIMNDVRYDSLAGF 65
Query: 320 RNRXXXXXXXXXXXXXXXXXXXXXSKD-TDSVYASGLCKNLLQEYSQKLNLPVPSYKCVK 496
NR ++ T V+ +GLCKNLLQEY+QK+N +P Y+ K
Sbjct: 66 FNRKAAEQSAAEVALMELAKTGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPLYQSKK 125
Query: 497 --TGEGNEAKFVCTVEIAGQSYVGGPARSKKDAAVKAARTALYVM----GQQHNVPLGSS 658
T G + CTV+I G Y+GG A++K++A +KAARTAL + Q G
Sbjct: 126 DDTPPGRAPLYSCTVDIGGMLYIGGTAKTKREAEIKAARTALLAIQTNASQASENQFGHL 185
Query: 659 AVAVDPK--SESVDATNNKRPHNDADGGK-KFKKRK--ANLKPRXXXXXXXXXXXXEIGA 823
V K +ES+ +K P + K K+ K+K N K R + GA
Sbjct: 186 TVIPSRKRATESIADEASKAPKSKKSRFKGKYSKKKPHRNKKRRINADNAGDEAKIDNGA 245
Query: 824 KEPEAEQTTNDDDANKETLSQDEKHKQEGTDILKSKMNGENSSPHKND 967
E+ + ND+ +E S+ ++++K+ NG +S+ H+ +
Sbjct: 246 ---ESLASANDESGLQEIKSE----AAFPSEVMKNSENGVSSNHHEKE 286