BLASTX nr result

ID: Ephedra27_contig00007638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00007638
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              77   2e-12
ref|XP_002449976.1| hypothetical protein SORBIDRAFT_05g026480 [S...    61   2e-07

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 8/165 (4%)
 Frame = +3

Query: 3   VQKDILDDISSTGEYEKPKSHTEGQSYLSESLKEKLCFLYIDNVLGREELRKLLPKNMEN 182
           +QK IL D++ +    + + H +GQ  LS  L++   F+YIDN LG  EL +LLP+++  
Sbjct: 370 LQKLILRDLTRSENIPQIRKHEDGQRELSRVLEDVSAFIYIDNALGERELGQLLPEDLSK 429

Query: 183 CKKLRILMTARHSTVADALSIGNHNIHVYVVPSLPREPSMAILCA--SMNVQALSDCVDL 356
            KK+R+L+TAR   V  +  +           + P+E  M  + +  + N+  +     +
Sbjct: 430 AKKVRLLITARDLNVRKSCPL----------KTAPKEYRMKAISSMEATNLLKMEMFGHM 479

Query: 357 D------QLEYILKMCGGVPLALEIVGCYIGNERDKDAAFRIIKE 473
           +      Q+ +I+K CGG+PL L++V   +   +DK+   +++ E
Sbjct: 480 ETILYSYQVNHIIKKCGGIPLMLKLVARALRFAKDKEEVDQVLDE 524


>ref|XP_002449976.1| hypothetical protein SORBIDRAFT_05g026480 [Sorghum bicolor]
           gi|241935819|gb|EES08964.1| hypothetical protein
           SORBIDRAFT_05g026480 [Sorghum bicolor]
          Length = 1025

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
 Frame = +3

Query: 9   KDILDDISSTGEYEKPKSHTEGQSYLSESLKEKLCFLYIDNVLGREELRKLLPKNMENCK 188
           K+IL +I    + E+ +S  E ++ L+E++  K   L +D++   +    LL   +    
Sbjct: 242 KEILRNIGV--QQEQGESLGELKAKLAEAINGKRFLLVLDDLWESDVWTNLLRTPLAAAD 299

Query: 189 KLRILMTARHSTVADALSIGNHNIHVYVVPSLPREPSMAILCASMNVQALSDCVDLDQLE 368
           ++ IL+T RH TVA A+ +G    H++ V  L  E    +L  SMN+ +  + ++L +  
Sbjct: 300 QVTILVTTRHDTVAKAIGVG----HMHRVELLSEEVGWELLWKSMNISSEKEVLNLRETG 355

Query: 369 Y-ILKMCGGVPLALEIVGCYIGNERDKDAAFRII 467
             I++ CGG+PLA+ +V   +  +   +  +R I
Sbjct: 356 IGIVQKCGGLPLAIRVVASVLSTKETTENEWRNI 389


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