BLASTX nr result

ID: Ephedra27_contig00007355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00007355
         (663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144685.1| PREDICTED: uncharacterized protein LOC101208...    57   5e-06
ref|XP_002325891.2| hypothetical protein POPTR_0019s06130g [Popu...    56   8e-06
ref|XP_006836208.1| hypothetical protein AMTR_s00101p00086830 [A...    56   8e-06

>ref|XP_004144685.1| PREDICTED: uncharacterized protein LOC101208481 [Cucumis sativus]
          Length = 1585

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/73 (39%), Positives = 40/73 (54%)
 Frame = +2

Query: 149 KVALYIRKNSKLCYKFAKRNPVLTSMLCCFGLLYVVCPGLFFFLVHNSPVLICTAXXXXX 328
           +V  ++  + + CY+  +  P L  +LC   LLY  CP LF  LV  SPVLICTA     
Sbjct: 6   RVRKFVVVSIRTCYRSVRNYPFLFGLLCFLILLYRSCPFLFSLLVSASPVLICTAVLLGT 65

Query: 329 XXXXXQPHIPQID 367
                QP+IP+I+
Sbjct: 66  LLSYGQPNIPEIE 78


>ref|XP_002325891.2| hypothetical protein POPTR_0019s06130g [Populus trichocarpa]
           gi|550316913|gb|EEF00273.2| hypothetical protein
           POPTR_0019s06130g [Populus trichocarpa]
          Length = 1384

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = +2

Query: 137 MDSKKVALYIRKNS----KLCYKFAKRNPVLTSMLCCFGLLYVVCPGLFFFLVHNSPVLI 304
           +D+ K+ + IRK S    +LCY+   ++P L  M+C   LLY   P LF  LV  SPVLI
Sbjct: 18  IDAMKIRVQIRKFSVILFRLCYRSVCKHPFLVGMVCYLLLLYSSFPVLFSLLVSASPVLI 77

Query: 305 CTAXXXXXXXXXXQPHIPQID 367
           CTA          +P+ P I+
Sbjct: 78  CTAILLGTLLCFGEPNAPDIE 98


>ref|XP_006836208.1| hypothetical protein AMTR_s00101p00086830 [Amborella trichopoda]
           gi|548838708|gb|ERM99061.1| hypothetical protein
           AMTR_s00101p00086830 [Amborella trichopoda]
          Length = 1509

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = +2

Query: 140 DSKKVALYIRKNSKL----CYKFAKRNPVLTSMLCCFGLLYVVCPGLFFFLVHNSPVLIC 307
           DSK++   ++K   L     Y+  + +P + +M C F  +Y   P LFFF V +SPVL+C
Sbjct: 4   DSKQITFKVKKVVVLFSVSLYRSVRDHPFIWAMACVFVWMYRFFPSLFFFFVSSSPVLVC 63

Query: 308 TAXXXXXXXXXXQPHIPQIDD 370
           TA          QP IP++++
Sbjct: 64  TAVLLGALLSFGQPQIPEVEE 84


Top