BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00007349
         (594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   143   4e-32
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   142   5e-32
ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   141   1e-31
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   133   3e-29
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   132   7e-29
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   131   2e-28
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...   130   3e-28
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     129   6e-28
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   129   6e-28
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   129   6e-28
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   129   8e-28
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...   126   4e-27
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...   126   4e-27
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr...   126   5e-27
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   125   1e-26
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...   121   1e-25
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       120   4e-25

>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
           gi|557542189|gb|ESR53167.1| hypothetical protein
           CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  143 bits (360), Expect = 4e-32
 Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 2/189 (1%)
 Frame = +3

Query: 33  DISEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWEI 206
           ++S++ V++ LK L   P KAL FF W                +LR + +   V++FW +
Sbjct: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288

Query: 207 AEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLS 386
            EEMK+  + M+  TY  +  +FQ+ RI ED +KLF ++++    KPS  +C  +L  +S
Sbjct: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFEFMMDGPY-KPSVQDCSLLLRSIS 347

Query: 387 RDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPN 566
              + D+   +RV   Y+  G S+ K +YDG+HR L + GRFDEAEK+M++M   GF P+
Sbjct: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407

Query: 567 NVTYSQLIY 593
           N+TYSQ+I+
Sbjct: 408 NITYSQVIF 416


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  142 bits (359), Expect = 5e-32
 Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 2/189 (1%)
 Frame = +3

Query: 33  DISEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWEI 206
           ++S++ V++ LK L   P KAL FF W                +LR + +   V++FW +
Sbjct: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288

Query: 207 AEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLS 386
            EEMK+  + M+  TY  +  +FQ+ R+ ED +KLF ++++    KPS  +C  +L  +S
Sbjct: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY-KPSVQDCSLLLRSIS 347

Query: 387 RDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPN 566
              + D+   +RV   Y+  G S+ K +YDG+HR L + GRFDEAEK+M++M   GF P+
Sbjct: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKIMKAMKNAGFEPD 407

Query: 567 NVTYSQLIY 593
           N+TYSQ+I+
Sbjct: 408 NITYSQVIF 416


>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322390|gb|EEF05766.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 486

 Score =  141 bits (356), Expect = 1e-31
 Identities = 70/200 (35%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
 Frame = +3

Query: 3   ETVEKLNGISDISEDH-VVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVG 173
           E  +KL G+  +  D+ V+  LK L   P KAL FF+W               A++R +G
Sbjct: 74  EVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHNTVTYNALVRVLG 133

Query: 174 KKNHVQEFWEIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPST 353
           + + + EFW + +EMK   + M+  TY  +  +FQ+ ++ ED ++L+ ++++    KPS 
Sbjct: 134 RDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMMDGPF-KPSV 192

Query: 354 HNCYSVLNYLSRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVM 533
            +CY +L  ++   + D+D   RV++ YK  G S+ K +YDG+HR    AG+FDEAEK++
Sbjct: 193 QDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFTSAGKFDEAEKIV 252

Query: 534 ESMTREGFIPNNVTYSQLIY 593
           ++M   G+ P+N+TYSQL++
Sbjct: 253 KAMRDAGYEPDNITYSQLVF 272


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  133 bits (335), Expect = 3e-29
 Identities = 73/194 (37%), Positives = 106/194 (54%)
 Frame = +3

Query: 12  EKLNGISDISEDHVVSALKTLNPEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQ 191
           E  N  SD    HV+  L+   P KAL FF+W                + R +G+ + + 
Sbjct: 224 ELKNSFSDNFVLHVLRELRGY-PLKALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIG 282

Query: 192 EFWEIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSV 371
           EFW + EEMK     M+  TY  +  +FQ+ ++ ED +KL+  I+ +   KPS  +C  +
Sbjct: 283 EFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLYE-IMMDGPYKPSVQDCTML 341

Query: 372 LNYLSRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTRE 551
           L  +S   + D+   +RV E Y+  G S+ K +YDG+HR L   GRFDEA K+MESM   
Sbjct: 342 LRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSA 401

Query: 552 GFIPNNVTYSQLIY 593
           G  P+N+TYSQL+Y
Sbjct: 402 GCEPDNITYSQLVY 415


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g48250, chloroplastic; Flags: Precursor
           gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
           thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  133 bits (335), Expect = 3e-29
 Identities = 70/191 (36%), Positives = 110/191 (57%), Gaps = 5/191 (2%)
 Frame = +3

Query: 36  ISEDHVVSALKTL--NPEKALSFFEWXXXXXXXXXXXXXXX---AMLRAVGKKNHVQEFW 200
           +S++ V+  LK L  +P KAL+FF W                  A LR + + N V EFW
Sbjct: 224 LSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFW 283

Query: 201 EIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNY 380
            + +EMK   + M+  TY  V  +FQ+ R+  + +KL+ ++++    KPS  +C  +L Y
Sbjct: 284 SVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPF-KPSIQDCSLLLRY 342

Query: 381 LSRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFI 560
           LS   + D+D  +RV   Y+  G S+ K +YDG+HR L   GRFDEAE++ ++M   G+ 
Sbjct: 343 LSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYE 402

Query: 561 PNNVTYSQLIY 593
           P+N+TYSQL++
Sbjct: 403 PDNITYSQLVF 413


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score =  132 bits (332), Expect = 7e-29
 Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 3/189 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTL--NPEKALSFFEWXXXXXXXXXXXXXXX-AMLRAVGKKNHVQEFWEI 206
           +S++ V+  LK L  +P KAL+FF W                A LR + + N V EFW +
Sbjct: 223 LSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 282

Query: 207 AEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLS 386
            +EMK     M+  TY  V  +FQ+ R+  + +KL+ ++++    KPS  +C  +L YLS
Sbjct: 283 VDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYMMDGPF-KPSIQDCSLLLRYLS 341

Query: 387 RDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPN 566
              + D+D  +RV   Y+  G S+ K +YDG+HR L   GRFDEAE++ ++M   G+ P+
Sbjct: 342 ARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPD 401

Query: 567 NVTYSQLIY 593
           N+TYSQL++
Sbjct: 402 NITYSQLVF 410


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  131 bits (329), Expect = 2e-28
 Identities = 66/188 (35%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWEIA 209
           +S++ VV  LK L   P KALSFF W               A+ R + + + + EFW + 
Sbjct: 246 LSDNFVVRVLKELRICPSKALSFFHWVGQSSGYEHNTITYNAVARILAQADSIGEFWSVI 305

Query: 210 EEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLSR 389
           EEMK     ++  TY  +  +FQ+ ++ ED +KL+  ++ +   KPS  +C  +L  +S 
Sbjct: 306 EEMKGAGHELDLDTYIKITRQFQKSKMMEDAVKLYE-LMMDGPYKPSAQDCSMLLRSISA 364

Query: 390 DKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPNN 569
           +   D+D  +RV + ++  G ++ K +YDG+HR L  AG FDEAEK+ + M   G+ P+N
Sbjct: 365 NDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHRSLTSAGSFDEAEKITKVMRNAGYEPDN 424

Query: 570 VTYSQLIY 593
           +TYSQL++
Sbjct: 425 ITYSQLVF 432


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 635

 Score =  130 bits (327), Expect = 3e-28
 Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 2/188 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWEIA 209
           +S+  V   LK L   P KA  FF W               A+ R + +   ++EFW I 
Sbjct: 231 LSDSFVTRVLKELQNCPLKAYKFFHWVGSQSVYEHNTVTYNAVARVLARPGSIKEFWSIL 290

Query: 210 EEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLSR 389
           EEMK   + ++  TY  +  +  + ++ E+ ++L+  ++ +   KPSTH+C  +LN +S 
Sbjct: 291 EEMKSVRYQLDIDTYTTITMQLVKNQMIENAVELYE-LMMDGSYKPSTHDCCVLLNAIST 349

Query: 390 DKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPNN 569
               + D A+RV + Y+  G ++ K+IYDG+HR L  AG+FDEAEK++++M+  GF P++
Sbjct: 350 SDFPNSDLAFRVAKKYESVGHTLTKEIYDGIHRSLTSAGKFDEAEKIVKTMSNAGFEPDS 409

Query: 570 VTYSQLIY 593
           VTYSQ+++
Sbjct: 410 VTYSQVVF 417


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  129 bits (324), Expect = 6e-28
 Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 4/201 (1%)
 Frame = +3

Query: 3   ETVEKLNG--ISDISEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAV 170
           + VEK  G  I D+S++ V+  LK L   P KA SFF W               A  R +
Sbjct: 215 DEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEHNSVTYNAAARVL 274

Query: 171 GKKNHVQEFWEIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPS 350
            + + + EFW + EEMK   + ++   Y  +  +FQ+ ++ ED +KL+ ++++    KPS
Sbjct: 275 SRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLYEFMMDGPF-KPS 333

Query: 351 THNCYSVLNYLSRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKV 530
             +C  +L  +S   + D   A+RV + Y+  G ++ K  YDG+HR L  AGRFDEAEK+
Sbjct: 334 AQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLTSAGRFDEAEKM 393

Query: 531 MESMTREGFIPNNVTYSQLIY 593
           M+ M   G+ P+N+TYSQL++
Sbjct: 394 MKVMRNAGYEPDNITYSQLVF 414


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
           gi|565465717|ref|XP_006290750.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559456|gb|EOA23647.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559457|gb|EOA23648.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  129 bits (324), Expect = 6e-28
 Identities = 67/189 (35%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTL--NPEKALSFFEWXXXXXXXXXXXXXXX-AMLRAVGKKNHVQEFWEI 206
           +S++ V+  LK L  +P KAL+FF W                A LR + + N V EFW +
Sbjct: 223 LSDNFVIRVLKELRDHPLKALAFFNWVGGSSSGYQHSTVTYNAALRVLTRPNSVAEFWNV 282

Query: 207 AEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLS 386
            +EMK   + M+  TY  V  +FQ+ R+  + +KL+ ++++    KP  H+C ++L  LS
Sbjct: 283 VDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDGPF-KPLVHDCSTLLRSLS 341

Query: 387 RDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPN 566
              + D+D  +RV   ++  G S+ K +YDG+HR L   GRFDEAE+++++M    + P+
Sbjct: 342 AGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRNASYEPD 401

Query: 567 NVTYSQLIY 593
           N+TYSQL++
Sbjct: 402 NITYSQLVF 410


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  129 bits (324), Expect = 6e-28
 Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
 Frame = +3

Query: 3   ETVEKLNGISDISEDH-VVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVG 173
           E  ++L G+  +  D+ V+  LK L   P KAL FF W               A+ R +G
Sbjct: 215 EVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECNTITYNAIARVLG 274

Query: 174 KKNHVQEFWEIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPST 353
           + + + EFW + EEMK     M+  TY  +  +FQ+ ++  D +KL+ ++++    KPS 
Sbjct: 275 RDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYEFMMDGPF-KPSV 333

Query: 354 HNCYSVLNYLSRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVM 533
            +C  +L  +S     D++  +RV+  Y+  G S+ K +YDG+HR L   G FDEA K+M
Sbjct: 334 QDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMM 393

Query: 534 ESMTREGFIPNNVTYSQLIY 593
           + M   G+ P+N+TYSQL++
Sbjct: 394 KCMQTAGYEPDNITYSQLVF 413


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  129 bits (323), Expect = 8e-28
 Identities = 67/190 (35%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
 Frame = +3

Query: 36  ISEDHVVSALKTL----NPEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWE 203
           +S++ V+  LK L    NP KA SFF+W                +LR + ++  ++EFW 
Sbjct: 229 VSDNFVLRVLKELREVGNPLKAFSFFKWVARNLDFQHSTVTYNGILRVLCREESIEEFWG 288

Query: 204 IAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYL 383
           + +EM    F ++  TY  +   FQ+ ++ +D ++L+  +++ +  KPS   C  +L  +
Sbjct: 289 VVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDGQF-KPSLGECNILLRSI 347

Query: 384 SRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIP 563
           ++    D+D  +RV+E ++  G S  K IYD +HRCL   GRF+EAEK+ E+M   GF P
Sbjct: 348 AQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEP 407

Query: 564 NNVTYSQLIY 593
           +N+TYSQLIY
Sbjct: 408 DNITYSQLIY 417


>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score =  126 bits (317), Expect = 4e-27
 Identities = 66/190 (34%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
 Frame = +3

Query: 36  ISEDHVVSALKTLN----PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWE 203
           +S++ V+  LK L     P KA SFF+W                +LR + ++  ++EFW 
Sbjct: 229 VSDNFVLRVLKELREIGYPLKAFSFFKWVARNLDFQHTTITYNGILRVLCREESIEEFWG 288

Query: 204 IAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYL 383
           + +EM    F ++  TY  +   FQ+ ++ +D ++L+  +++ +  KPS   C  +L  +
Sbjct: 289 VVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDGQF-KPSLGECNILLRSI 347

Query: 384 SRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIP 563
           ++    D+D  +RV+E ++  G S  K IYD +HRCL   GRF+EAEK+ E+M   GF P
Sbjct: 348 AQSHPSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEP 407

Query: 564 NNVTYSQLIY 593
           +N+TYSQLIY
Sbjct: 408 DNITYSQLIY 417


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
           gi|548855973|gb|ERN13836.1| hypothetical protein
           AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score =  126 bits (317), Expect = 4e-27
 Identities = 61/188 (32%), Positives = 111/188 (59%), Gaps = 2/188 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTL--NPEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWEIA 209
           +S+  ++  L+ +  +P KAL F+ W               +++R +G+ + V+EFW + 
Sbjct: 171 LSDSTILRVLEEIRVDPLKALDFYRWVGGQPNFRHSAITYNSIIRVLGRNDSVKEFWAMV 230

Query: 210 EEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLSR 389
           +EMK   F M+  +Y  +  +FQ+  + ++ ++L+ ++  E   +PS  +C  +L  L+ 
Sbjct: 231 KEMKESGFDMDMDSYVKLSRRFQKWNMLKEAVELYEFM-SEGPYQPSVQHCGLLLRKLAT 289

Query: 390 DKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPNN 569
             +   D  +RV++ ++  G S+ K IYDG+HR L   GRFDEA+ ++E+M + GFIP+N
Sbjct: 290 SGNPGPDLVFRVVKKFEGAGNSLTKSIYDGIHRSLTSMGRFDEAQNILEAMEKAGFIPDN 349

Query: 570 VTYSQLIY 593
           +TYSQLI+
Sbjct: 350 ITYSQLIF 357


>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
           gi|557105401|gb|ESQ45735.1| hypothetical protein
           EUTSA_v10010209mg [Eutrema salsugineum]
          Length = 617

 Score =  126 bits (316), Expect = 5e-27
 Identities = 68/189 (35%), Positives = 108/189 (57%), Gaps = 3/189 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTL--NPEKALSFFEWXXXXXXXXXXXXXXX-AMLRAVGKKNHVQEFWEI 206
           +S++ V+  LK L  +P KAL+FF W                A LR + + N V EFW +
Sbjct: 223 LSDNFVIRVLKELRDHPLKALAFFHWVGGSSSGYKHSTITYNAALRVLARPNSVAEFWSV 282

Query: 207 AEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLS 386
            +EMK     ++  TY  V+ +FQ+ R+  + +KL+  ++ +   KPS  +C  +L  LS
Sbjct: 283 VDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYE-LMMDGPFKPSAQDCSLLLRSLS 341

Query: 387 RDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPN 566
                D+D  +RV   Y+  G S+ K +YDG+HR L   GRFDEAE+++++M   G+ P+
Sbjct: 342 AGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRDSGYEPD 401

Query: 567 NVTYSQLIY 593
           N+TYSQL++
Sbjct: 402 NITYSQLVF 410


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  125 bits (313), Expect = 1e-26
 Identities = 63/188 (33%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWEIA 209
           +S++ V+  LK L   P KA  FF W               A+ R + +   ++EFW + 
Sbjct: 228 LSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVI 287

Query: 210 EEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLSR 389
           EEMKR    ++  TY  +  + QR R+ ED +KL+  +++    KP   +C  +L  +S 
Sbjct: 288 EEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKLYELMMDGSC-KPLVQDCNMLLKSISA 346

Query: 390 DKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPNN 569
           +   ++D  +RV + Y+  G ++ K IYDG+HR L  AG FDEAE ++ +M   G+ P+N
Sbjct: 347 NDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTMRNAGYEPDN 406

Query: 570 VTYSQLIY 593
           +TYSQ+++
Sbjct: 407 ITYSQMVF 414



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
 Frame = +3

Query: 21  NGISDISEDHVVSALKTL--NPEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQE 194
           N    +  + V+  +K L  NPEKA  FF W                ++R +  K+ +++
Sbjct: 86  NRFPSMPHETVLYVIKRLDKNPEKASCFFNWVCKKVWFRPSCSVYSLIVRILAAKDTMKQ 145

Query: 195 FWEIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKL---FNWIIEEEKEKPSTHNCY 365
           FW     MK + FF++  TY  +   F+RE++  D + L   +N ++EE   +    N  
Sbjct: 146 FWVTLRMMKENGFFLDEETYLTISVGFKREKMDSDSVALTHFYNRMLEENAMQSVVSNVV 205

Query: 366 SVLNYLSRDKDIDMDAA-----------YRV--------IEAY-------KKCGGSMDKD 467
            +++      ++  + A            RV        ++AY       K+ G   D  
Sbjct: 206 GIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYEHDTV 265

Query: 468 IYDGLHRCLVRAGRFDEAEKVMESMTREGFIPNNVTYSQL 587
            Y+ + R L RA   +E   V+E M R G   +  TY ++
Sbjct: 266 TYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKI 305


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  124 bits (312), Expect = 1e-26
 Identities = 62/188 (32%), Positives = 108/188 (57%), Gaps = 2/188 (1%)
 Frame = +3

Query: 36  ISEDHVVSALKTL--NPEKALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWEIA 209
           +S++ V+  LK L  +P KALSFF W               A+ R +G+ + ++ FW + 
Sbjct: 222 LSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVI 281

Query: 210 EEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYLSR 389
           EEMK     ++  TY  +  +FQ+ ++  + +KL+  ++ +   KPS  +C  +L  ++ 
Sbjct: 282 EEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYE-LMMDGPYKPSLQDCSVLLRTIAA 340

Query: 390 DKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIPNN 569
             + D+   YRV + ++  G S+ K +YDG+HR L   G+FD+AE +++SM   G+ P+N
Sbjct: 341 SDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDN 400

Query: 570 VTYSQLIY 593
           VTYSQL++
Sbjct: 401 VTYSQLVF 408


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  122 bits (307), Expect = 5e-26
 Identities = 69/201 (34%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
 Frame = +3

Query: 3   ETVEKLNGISDI--SEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLRAV 170
           + VEK  G  D+  SE  VV  L+ L   P KAL FF W                M   +
Sbjct: 215 DKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQCAGYEHNSVTYNGMSLVL 274

Query: 171 GKKNHVQEFWEIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPS 350
           G+ + + EFW + EEMK     ++  TY  +  +FQ+ ++ ED +KL+  ++ +   KPS
Sbjct: 275 GQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDAVKLYE-LMMDGPYKPS 333

Query: 351 THNCYSVLNYLSRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKV 530
             +   +L  +S ++  DMD  +RV++ ++  G ++ K +YDG+HR L   GRFDEAE  
Sbjct: 334 VQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGIHRSLTNLGRFDEAEDT 393

Query: 531 MESMTREGFIPNNVTYSQLIY 593
           + +M   GF P+N+TYSQ+++
Sbjct: 394 LIAMRNAGFEPDNITYSQVVF 414


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score =  121 bits (304), Expect = 1e-25
 Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
 Frame = +3

Query: 3   ETVEK-LNGIS---DISEDHVVSALKTLN--PEKALSFFEWXXXXXXXXXXXXXXXAMLR 164
           E +EK L G+     ++E  V   L+ L   P KAL FF W               AM R
Sbjct: 169 EALEKRLEGVDLLLPLTETTVAKVLRELRDCPVKALGFFRWAGRQKGYTHGSVAYNAMAR 228

Query: 165 AVGKKNHVQEFWEIAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEK 344
            +G++  VQEFWE+ +EMK    +++  TY  +  +FQ+  +  + ++L+  ++ +   K
Sbjct: 229 VLGREESVQEFWELIQEMKADGIYLDIDTYVKLNRQFQKRHMMTEAVELYE-LMMDGPYK 287

Query: 345 PSTHNCYSVLNYLSRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAE 524
           PS  +   +L  ++     D++ A+RV+  ++       KD++DG+HR L   GRFDEA 
Sbjct: 288 PSKQDGPVLLRRIALGPSPDLELAHRVVRKFEAVYEFKTKDVFDGIHRALTSNGRFDEAA 347

Query: 525 KVMESMTREGFIPNNVTYSQLIY 593
           +VMESM  EG  P+N+TYSQL++
Sbjct: 348 EVMESMRSEGHQPDNITYSQLVF 370


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  120 bits (300), Expect = 4e-25
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
 Frame = +3

Query: 36  ISEDHVVSALKTLNPE----KALSFFEWXXXXXXXXXXXXXXXAMLRAVGKKNHVQEFWE 203
           +S++ V+  LK L  +    KA  FF+W                +LR + ++  + EFW 
Sbjct: 231 VSDNLVLRILKQLRGQGCAVKAYRFFKWIESSSDFEHTTVTYNGVLRILCREESIDEFWN 290

Query: 204 IAEEMKRHEFFMEPSTYPIVMAKFQRERITEDIIKLFNWIIEEEKEKPSTHNCYSVLNYL 383
           +  EM    F ++  TY  V   FQ+  + ED +KL+  +++    KPS   C  +L  L
Sbjct: 291 VFSEMNAAGFRLDIDTYVKVSRSFQKNAMFEDGVKLYEHMMDSPY-KPSVSECNYLLQAL 349

Query: 384 SRDKDIDMDAAYRVIEAYKKCGGSMDKDIYDGLHRCLVRAGRFDEAEKVMESMTREGFIP 563
           SR    D+    RVIE +   G S+ K +YDG+HR L R G+F+EAE ++E M   GF P
Sbjct: 350 SRHGSPDLGLIDRVIEKFVAGGNSLSKTLYDGIHRSLTRLGKFEEAEGIVEKMRENGFEP 409

Query: 564 NNVTYSQLIY 593
           +NVTYSQL++
Sbjct: 410 DNVTYSQLVF 419