BLASTX nr result
ID: Ephedra27_contig00007328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00007328
(738 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr... 187 2e-45
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi... 186 5e-45
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 182 8e-44
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe... 182 1e-43
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A... 179 8e-43
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,... 178 2e-42
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi... 177 4e-42
ref|XP_002321639.2| pentatricopeptide repeat-containing family p... 176 9e-42
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi... 174 4e-41
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis] 173 5e-41
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ... 173 5e-41
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi... 171 2e-40
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar... 171 3e-40
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus... 170 4e-40
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi... 169 9e-40
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi... 169 1e-39
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr... 166 6e-39
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps... 166 6e-39
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi... 164 2e-38
dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare] 162 1e-37
>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
gi|557542189|gb|ESR53167.1| hypothetical protein
CICLE_v10019266mg [Citrus clementina]
Length = 639
Score = 187 bits (476), Expect = 2e-45
Identities = 93/226 (41%), Positives = 136/226 (60%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL FF W YN +LR + R FW + EEMK+EG+ ++ T++
Sbjct: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E+ KLF +M++ G K S CS L +++ P++ +RV +Y
Sbjct: 306 KISRQFQKFRIMEDAVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
+S G S++KS+YD +HR L+K G+F+EA K+M M GF P+N TY Q++FGLC A +
Sbjct: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
E+AC V+DEM+E GC D+KTWT+LI+GH A+E DRAL F+ M+
Sbjct: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Citrus sinensis]
Length = 639
Score = 186 bits (473), Expect = 5e-45
Identities = 92/226 (40%), Positives = 135/226 (59%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL FF W YN +LR + R FW + EEMK+EG+ ++ T++
Sbjct: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E+ KLF +M++ G K S CS L +++ P++ +RV +Y
Sbjct: 306 KISRQFQKFRMMEDAVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
+S G S++KS+YD +HR L+K G+F+EA K+M M GF P+N TY Q++FGLC A
Sbjct: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKIMKAMKNAGFEPDNITYSQVIFGLCKAGSF 424
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
E+AC V+DEM+E GC D+K+WT+LI+GH A+E DRAL F+ M+
Sbjct: 425 EDACNVLDEMEENGCIPDIKSWTILIQGHCAANEVDRALLCFAKMM 470
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 182 bits (463), Expect = 8e-44
Identities = 90/226 (39%), Positives = 138/226 (61%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL FF+W YN + R +GR + +FW + EEMK +G ++ T++
Sbjct: 245 PLKALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYI 304
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ + E+ KL+ M++ G K S C+ L ++ + P++ +RV E+Y
Sbjct: 305 KISRQFQKNKMLEDAVKLYEIMMD-GPYKPSVQDCTMLLRSISLSSNPDLALVFRVTEKY 363
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
++ G S+ K++YD +HR L+ G+F+EA K+M++M G P+N TY QLV+GLC ARKL
Sbjct: 364 EAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKL 423
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
EEACK++DEM+ GC D+KTWT+LI+GH A E D+AL F+ M+
Sbjct: 424 EEACKLLDEMEACGCVPDIKTWTILIQGHCAAKEVDKALICFAKMM 469
>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
Length = 646
Score = 182 bits (462), Expect = 1e-43
Identities = 89/226 (39%), Positives = 134/226 (59%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KALSFF W YNA+ R + + + +FW + EEMK G ++ T++
Sbjct: 262 PSKALSFFHWVGQSSGYEHNTITYNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTYI 321
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E+ KL+ M++ G K S CS L ++ N P++ +RV +++
Sbjct: 322 KITRQFQKSKMMEDAVKLYELMMD-GPYKPSAQDCSMLLRSISANDKPDLDMVFRVAKKF 380
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
+S G +++K++YD +HR L+ AG F+EA K+ M G+ P+N TY QLVFGLC A++L
Sbjct: 381 ESAGNTLSKAVYDGIHRSLTSAGSFDEAEKITKVMRNAGYEPDNITYSQLVFGLCKAKRL 440
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
EEACKV+DEM+ GC D+ TWT+LI+GH A+E D AL F+ M+
Sbjct: 441 EEACKVLDEMEANGCVPDIMTWTILIQGHCAANEVDTALVCFAKMI 486
Score = 65.1 bits (157), Expect = 2e-08
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 29/246 (11%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYT- 506
+P KA FF W V+N ML +G ++ +FW +MKE+GF++E T
Sbjct: 124 DPKKAWDFFNWVCEKNGFKPSSLVFNLMLGVLGHKDSMKQFWITLRQMKEQGFYIEVQTY 183
Query: 505 ------------------FMLFCTRCLGDDSTEEIAKLFTWMIENGKEKVS-PNICSRAL 383
F F R + D++T+E+AK ++ +
Sbjct: 184 SAIAERLKKGKMDNDVVAFKHFFERMMKDNATDEVAKKVADVVSGSEWSAGIEKELGELK 243
Query: 382 FFLATNKVPNIHTAYRVIEEY---------KSCGGSMNKSIYDSLHRCLSKAGKFEEAWK 230
L+ N V + R+ +S G N Y+++ R L++A E W
Sbjct: 244 ITLSDNFVVRVLKELRICPSKALSFFHWVGQSSGYEHNTITYNAVARILAQADSIGEFWS 303
Query: 229 VMDTMAKEGFTPNNNTYGQLVFGLCAARKLEEACKVIDEMKEKGCDADLKTWTVLIEGHA 50
V++ M G + +TY ++ ++ +E+A K+ + M + + ++L+ +
Sbjct: 304 VIEEMKGAGHELDLDTYIKITRQFQKSKMMEDAVKLYELMMDGPYKPSAQDCSMLLRSIS 363
Query: 49 NADETD 32
D+ D
Sbjct: 364 ANDKPD 369
>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
gi|548855973|gb|ERN13836.1| hypothetical protein
AMTR_s00049p00223850 [Amborella trichopoda]
Length = 570
Score = 179 bits (454), Expect = 8e-43
Identities = 88/228 (38%), Positives = 135/228 (59%)
Frame = -3
Query: 685 LNPDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYT 506
++P KAL F+ W YN+++R +GR + +FW + +EMKE GF ++ +
Sbjct: 185 VDPLKALDFYRWVGGQPNFRHSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDS 244
Query: 505 FMLFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIE 326
++ R + +E +L+ +M E G + S C L LAT+ P +RV++
Sbjct: 245 YVKLSRRFQKWNMLKEAVELYEFMSE-GPYQPSVQHCGLLLRKLATSGNPGPDLVFRVVK 303
Query: 325 EYKSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAAR 146
+++ G S+ KSIYD +HR L+ G+F+EA +++ M K GF P+N TY QL+FGLC A
Sbjct: 304 KFEGAGNSLTKSIYDGIHRSLTSMGRFDEAQNILEAMEKAGFIPDNITYSQLIFGLCKAH 363
Query: 145 KLEEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
+ +EACK +DEM+ GC DLKTWT+LI+GH A E AL+ F M+
Sbjct: 364 RFDEACKFLDEMEALGCTPDLKTWTILIQGHCLAGEVKEALSCFKKML 411
>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 627
Score = 178 bits (451), Expect = 2e-42
Identities = 88/226 (38%), Positives = 136/226 (60%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL FF W YNA+ R +GR + +FW + EEMK G ++ T++
Sbjct: 243 PLKALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYI 302
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ + + KL+ +M++ G K S CS L ++ + P+++ +RV+ +Y
Sbjct: 303 KISRQFQKNKLMGDAVKLYEFMMD-GPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKY 361
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
++ G S++K++YD +HR L+ G F+EA K+M M G+ P+N TY QLVFGLC AR+L
Sbjct: 362 EATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRL 421
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
EEAC+V+DEM+ GC D+KTWT+LI+GH A+E +AL + M+
Sbjct: 422 EEACEVLDEMEAHGCLPDIKTWTILIQGHCVANEVGKALMCLAKMM 467
>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 177 bits (448), Expect = 4e-42
Identities = 91/227 (40%), Positives = 136/227 (59%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTF 503
+P KALSFF W YNA+ R +GR + FW + EEMK ++ T+
Sbjct: 237 SPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTY 296
Query: 502 MLFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEE 323
+ + E KL+ M++ G K S CS L +A + P++ YRV ++
Sbjct: 297 IKISRQFQKSKMMGEAVKLYELMMD-GPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKK 355
Query: 322 YKSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARK 143
+++ G S++K++YD +HR L+ GKF++A ++ +M G+ P+N TY QLVFGLC AR+
Sbjct: 356 FEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARR 415
Query: 142 LEEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
LEEA KV+DEM+ +GC D+KTWT+LI+GH NA+E D AL F+ M+
Sbjct: 416 LEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMI 462
>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322390|gb|EEF05766.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 486
Score = 176 bits (445), Expect = 9e-42
Identities = 86/219 (39%), Positives = 134/219 (61%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL FF+W YNA++R +GR + +FW + +EMK G+ ++ T++
Sbjct: 102 PVKALRFFQWVDRREGYQHNTVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYI 161
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E+ +L+ +M++ G K S C L +A + P++ RV++ Y
Sbjct: 162 KISRQFQKIKLMEDAVRLYEFMMD-GPFKPSVQDCYILLRSVAASDNPDLDLVSRVVDGY 220
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
K+ G S++KS+YD +HR + AGKF+EA K++ M G+ P+N TY QLVFGLC +++L
Sbjct: 221 KATGNSLSKSVYDGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRL 280
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRAL 23
EEACKV+DEM+ GC D+KTWT+LI+GH A++ D+ L
Sbjct: 281 EEACKVLDEMEAGGCIPDIKTWTILIQGHFAANQVDKGL 319
>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 174 bits (440), Expect = 4e-41
Identities = 85/226 (37%), Positives = 132/226 (58%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KA FF W YNA+ R + R +FW + EEMK G ++ T++
Sbjct: 244 PLKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYI 303
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ + E+ KL+ M++ G K C+ L ++ N PN+ +RV ++Y
Sbjct: 304 KITRQLQRNRMMEDAVKLYELMMD-GSCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKY 362
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
+S G +++K+IYD +HR L+ AG F+EA ++ TM G+ P+N TY Q+VFGLC R+
Sbjct: 363 ESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRRF 422
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
EEACKV+++M+ C D+KTWT+LI+GH +A+E D+AL F+ M+
Sbjct: 423 EEACKVLEDMESSRCIPDIKTWTILIQGHCSANEVDKALLCFAKMI 468
>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
Length = 628
Score = 173 bits (439), Expect = 5e-41
Identities = 88/226 (38%), Positives = 132/226 (58%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KA SFF W YNA R + R + +FW + EEMK G+ ++ ++
Sbjct: 244 PSKASSFFRWVGRYPGYEHNSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYI 303
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E+ KL+ +M++ G K S C+ L ++ P+ A+RV ++Y
Sbjct: 304 KISRQFQKSKMMEDSVKLYEFMMD-GPFKPSAQDCNLLLRSISAGDNPDCSLAFRVAKKY 362
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
+S G +++K+ YD +HR L+ AG+F+EA K+M M G+ P+N TY QLVFGLC AR+L
Sbjct: 363 ESTGRTLSKAAYDGIHRSLTSAGRFDEAEKMMKVMRNAGYEPDNITYSQLVFGLCKARRL 422
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
EEA +V+DEM+ GC D+KTWT+LI+GH +A E D+ L F M+
Sbjct: 423 EEARRVLDEMEANGCTPDIKTWTILIQGHCSAGEVDKGLMCFMKMM 468
>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323443|gb|EFH53864.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 173 bits (439), Expect = 5e-41
Identities = 90/228 (39%), Positives = 138/228 (60%), Gaps = 1/228 (0%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXSV-YNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYT 506
+P KAL+FF W +V YNA LR + R N +FW + +EMK G ++ T
Sbjct: 238 HPLKALAFFHWVGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGHEMDLDT 297
Query: 505 FMLFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIE 326
++ + E KL+ +M++ G K S CS L +L+ P++ +RV
Sbjct: 298 YIKVSRQFQKSRMITETVKLYEYMMD-GPFKPSIQDCSLLLRYLSARPNPDLDLVFRVSR 356
Query: 325 EYKSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAAR 146
+Y+S G S++K++YD +HR L+ G+F+EA ++ M G+ P+N TY QLVFGLC A+
Sbjct: 357 KYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAK 416
Query: 145 KLEEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
+LEEA V+D+M+ +GC D+KTWT+LI+GH +E DRALA F++M+
Sbjct: 417 RLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDRALACFANML 464
>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Solanum lycopersicum]
Length = 642
Score = 171 bits (433), Expect = 2e-40
Identities = 89/227 (39%), Positives = 133/227 (58%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTF 503
NP KA SFF+W YN +LR + R +FW + +EM GF ++ T+
Sbjct: 246 NPLKAFSFFKWVARNLDFQHSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTY 305
Query: 502 MLFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEE 323
+ ++ +L+ M++ G+ K S C+ L +A + ++ +RV+E+
Sbjct: 306 IKISRHFQKIKMLKDAVELYELMMD-GQFKPSLGECNILLRSIAQSYSSDLDLLFRVVEK 364
Query: 322 YKSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARK 143
+++ G S +K IYD +HRCL+ G+FEEA K+ + M GF P+N TY QL++GLC R+
Sbjct: 365 FEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRR 424
Query: 142 LEEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
LEEA KVID M+E GC D+KTWTVLI+GH A E D+AL F+ M+
Sbjct: 425 LEEASKVIDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMM 471
>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g48250, chloroplastic; Flags: Precursor
gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 171 bits (432), Expect = 3e-40
Identities = 88/230 (38%), Positives = 138/230 (60%), Gaps = 3/230 (1%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXS---VYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEK 512
+P KAL+FF W YNA LR + R N +FW + +EMK G+ ++
Sbjct: 239 HPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL 298
Query: 511 YTFMLFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRV 332
T++ + E KL+ +M++ G K S CS L +L+ + P++ +RV
Sbjct: 299 DTYIKVSRQFQKSRMMAETVKLYEYMMD-GPFKPSIQDCSLLLRYLSGSPNPDLDLVFRV 357
Query: 331 IEEYKSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCA 152
+Y+S G S++K++YD +HR L+ G+F+EA ++ M G+ P+N TY QLVFGLC
Sbjct: 358 SRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCK 417
Query: 151 ARKLEEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
A++LEEA V+D+M+ +GC D+KTWT+LI+GH +E D+ALA F++M+
Sbjct: 418 AKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANML 467
>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
Length = 631
Score = 170 bits (431), Expect = 4e-40
Identities = 84/226 (37%), Positives = 132/226 (58%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P K+ FF W YNA+ + R + +FW + EE+K G ++ T++
Sbjct: 242 PLKSYKFFHWVGTQPGYEHNTVTYNAVASVLARNDSIQEFWSVIEELKSVGHELDIDTYI 301
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ + E+ KL+ M++ G K CS L ++ + PN+ +RV +Y
Sbjct: 302 KISRQLQKNRMMEDAVKLYEHMMD-GSYKPLVQDCSLLLKSISASDKPNLDLVFRVARKY 360
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
+S G +++K+IYD +HR L+ AGKF+EA ++ TM G P+N TY Q+V+GLC R+
Sbjct: 361 ESTGHTLSKAIYDGIHRSLTGAGKFDEAENIVRTMRNAGHKPDNITYSQVVYGLCKMRRF 420
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
EEACKV++EM+ GC D+KTWT+LI+GH +A+E ++AL FS M+
Sbjct: 421 EEACKVLEEMESCGCIPDIKTWTILIQGHCDANELEKALLCFSKMI 466
>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 642
Score = 169 bits (428), Expect = 9e-40
Identities = 88/226 (38%), Positives = 132/226 (58%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KA SFF+W YN +LR + R +FW + +EM GF ++ T++
Sbjct: 247 PLKAFSFFKWVARNLDFQHTTITYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYI 306
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
++ +L+ M++ G+ K S C+ L +A + ++ +RV+E++
Sbjct: 307 KISRHFQKIKMLKDAVELYELMMD-GQFKPSLGECNILLRSIAQSHPSDLDLLFRVVEKF 365
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
++ G S +K IYD +HRCL+ G+FEEA K+ + M GF P+N TY QL++GLC R+L
Sbjct: 366 EAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRL 425
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
EEA KVID M+E GC D+KTWTVLI+GH A E D+AL F+ M+
Sbjct: 426 EEASKVIDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMM 471
>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 169 bits (427), Expect = 1e-39
Identities = 84/226 (37%), Positives = 134/226 (59%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL FF W YN M +G+ + +FW + EEMK G ++ T++
Sbjct: 244 PLKALRFFRWVEQCAGYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYI 303
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E+ KL+ M++ G K S S L ++ N+ P++ +RV++++
Sbjct: 304 KLSRQFQKSKMVEDAVKLYELMMD-GPYKPSVQDVSILLRSISANERPDMDLVFRVVKKF 362
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
+S G +++K++YD +HR L+ G+F+EA + M GF P+N TY Q+VFGLC A+KL
Sbjct: 363 ESAGFTLSKAVYDGIHRSLTNLGRFDEAEDTLIAMRNAGFEPDNITYSQVVFGLCKAKKL 422
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
+EACK++D+M+E GC D+KTW +LI+GH A+E D+AL F+ M+
Sbjct: 423 DEACKLLDDMEENGCVPDIKTWMILIQGHCAANEIDKALICFAKMM 468
>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
gi|557105401|gb|ESQ45735.1| hypothetical protein
EUTSA_v10010209mg [Eutrema salsugineum]
Length = 617
Score = 166 bits (421), Expect = 6e-39
Identities = 87/228 (38%), Positives = 134/228 (58%), Gaps = 1/228 (0%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXSV-YNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYT 506
+P KAL+FF W ++ YNA LR + R N +FW + +EMK G V+ T
Sbjct: 238 HPLKALAFFHWVGGSSSGYKHSTITYNAALRVLARPNSVAEFWSVVDEMKVAGHEVDLDT 297
Query: 505 FMLFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIE 326
++ + E KL+ M++ G K S CS L L+ P++ +RV
Sbjct: 298 YIKVLRQFQKSRMMIEAVKLYELMMD-GPFKPSAQDCSLLLRSLSAGHKPDLDLVFRVSR 356
Query: 325 EYKSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAAR 146
+Y+S G S++K++YD +HR L+ G+F+EA +++ M G+ P+N TY QLVFGLC A+
Sbjct: 357 KYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRDSGYEPDNITYSQLVFGLCKAK 416
Query: 145 KLEEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
+LEEA V+++M+ +GC D+KTWT+LI+GH E D+A A F +M+
Sbjct: 417 RLEEARGVLEQMEAQGCFPDIKTWTILIQGHCKNSEVDQAFACFGNML 464
>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
gi|565465717|ref|XP_006290750.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559456|gb|EOA23647.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559457|gb|EOA23648.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
Length = 618
Score = 166 bits (421), Expect = 6e-39
Identities = 85/228 (37%), Positives = 137/228 (60%), Gaps = 1/228 (0%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXSV-YNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYT 506
+P KAL+FF W +V YNA LR + R N +FW + +EMK G+ ++ T
Sbjct: 238 HPLKALAFFNWVGGSSSGYQHSTVTYNAALRVLTRPNSVAEFWNVVDEMKIAGYEMDLDT 297
Query: 505 FMLFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIE 326
++ + E KL+ +M++ G K + CS L L+ P++ +RV
Sbjct: 298 YIRVSRQFQKSRMMTEAVKLYEYMMD-GPFKPLVHDCSTLLRSLSAGPNPDLDLVFRVSR 356
Query: 325 EYKSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAAR 146
+++S G S++K++YD +HR L+ G+F+EA +++ M + P+N TY QLVFGLC A+
Sbjct: 357 KFESSGNSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRNASYEPDNITYSQLVFGLCKAK 416
Query: 145 KLEEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
+LEEA V+D+M+ +GC D+KTWT+LI+GH +E D+A A F++M+
Sbjct: 417 RLEEARGVLDQMEAQGCSPDIKTWTILIQGHCKNNELDKAFACFANML 464
Score = 58.2 bits (139), Expect = 3e-06
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 31/224 (13%)
Frame = -3
Query: 682 NPDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTF 503
NPDKA F +W +Y+ MLR + ++ +FW++ EMK+ GF+++ T+
Sbjct: 101 NPDKAYCFIDWVLRDSGLSPSTPLYSIMLRILAQQRSMKRFWKILSEMKQGGFYLDDDTY 160
Query: 502 ML-------------------FCTRCLGDDSTEEIAKLFT-------WMIENGKEKVSPN 401
F R L D+ +A+ + W E KE
Sbjct: 161 TTVYGELKKSESKADAVAVAHFYERMLKDNEMYVVARNVSAAVLKVDWSCEVEKELQEMK 220
Query: 400 ICSRALFFLATNKVPNIHTAYRVIEEYKSCGGSM-----NKSIYDSLHRCLSKAGKFEEA 236
+ F + K H + + + GGS + Y++ R L++ E
Sbjct: 221 LVLSDNFVIRVLKELRDH-PLKALAFFNWVGGSSSGYQHSTVTYNAALRVLTRPNSVAEF 279
Query: 235 WKVMDTMAKEGFTPNNNTYGQLVFGLCAARKLEEACKVIDEMKE 104
W V+D M G+ + +TY ++ +R + EA K+ + M +
Sbjct: 280 WNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMD 323
>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Brachypodium distachyon]
Length = 585
Score = 164 bits (416), Expect = 2e-38
Identities = 86/226 (38%), Positives = 129/226 (57%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL FF W YNAM R +GR +FWEL +EMK +G +++ T++
Sbjct: 200 PVKALGFFRWAGRQKGYTHGSVAYNAMARVLGREESVQEFWELIQEMKADGIYLDIDTYV 259
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E +L+ M++ G K S L +A P++ A+RV+ ++
Sbjct: 260 KLNRQFQKRHMMTEAVELYELMMD-GPYKPSKQDGPVLLRRIALGPSPDLELAHRVVRKF 318
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
++ K ++D +HR L+ G+F+EA +VM++M EG P+N TY QLVFGLC A K
Sbjct: 319 EAVYEFKTKDVFDGIHRALTSNGRFDEAAEVMESMRSEGHQPDNITYSQLVFGLCKANKC 378
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
+EA KV+ EM+ +GC DLKTWT+LI+GH A E D+AL ++M+
Sbjct: 379 DEARKVLVEMENEGCAPDLKTWTMLIQGHCTAGEVDKALQYLTEMI 424
>dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 162 bits (410), Expect = 1e-37
Identities = 83/226 (36%), Positives = 128/226 (56%)
Frame = -3
Query: 679 PDKALSFFEWXXXXXXXXXXXSVYNAMLRAVGRRNYFHKFWELAEEMKEEGFWVEKYTFM 500
P KAL+FF W YNAM R +GR + +FWEL +EMK G V+ T+M
Sbjct: 207 PSKALAFFRWAGRQRGYEHGSVAYNAMARVLGREDSLREFWELVQEMKAGGVHVDIDTYM 266
Query: 499 LFCTRCLGDDSTEEIAKLFTWMIENGKEKVSPNICSRALFFLATNKVPNIHTAYRVIEEY 320
+ E +L+ M++ G K + L +A P++ YRV+ ++
Sbjct: 267 KLSRQFQKRHMMTEAVELYELMMD-GPYKPAQQDGPLLLRRIAMGPEPDLELVYRVVRKF 325
Query: 319 KSCGGSMNKSIYDSLHRCLSKAGKFEEAWKVMDTMAKEGFTPNNNTYGQLVFGLCAARKL 140
++ K+++D +HR L+ G+F+EA ++++ M G P+N TY QL+FGLC A K
Sbjct: 326 EAVYEFKTKNVFDGIHRALTSNGRFDEAAEIVERMRTAGHQPDNITYSQLIFGLCKAAKC 385
Query: 139 EEACKVIDEMKEKGCDADLKTWTVLIEGHANADETDRALALFSDMV 2
+EA +V+DEM+ +GC DLKTWT+LI+GH A E D+AL ++M+
Sbjct: 386 DEARQVLDEMEAEGCTPDLKTWTMLIQGHCAAGEVDKALQYLTEMI 431