BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00007296
         (745 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24406.1| unknown [Picea sitchensis]                             294   2e-77
ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [A...   251   2e-64
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   247   3e-63
ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Caps...   245   1e-62
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu...   244   2e-62
gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]   244   3e-62
ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana] g...   244   3e-62
gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]    243   5e-62
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla...   243   6e-62
gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theo...   242   8e-62
ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp....   241   1e-61
pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal Stru...   241   2e-61
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   241   2e-61
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu...   240   3e-61
gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus pe...   240   4e-61
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   239   7e-61
ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutr...   239   9e-61
gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theo...   238   2e-60
gb|AFW83381.1| hypothetical protein ZEAMMB73_684024 [Zea mays] g...   234   3e-59
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla...   232   1e-58

>gb|ABK24406.1| unknown [Picea sitchensis]
          Length = 290

 Score =  294 bits (752), Expect = 2e-77
 Identities = 144/200 (72%), Positives = 164/200 (82%)
 Frame = +1

Query: 145 AKIGLKEELRKSVADKDIAVSDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAM 324
           A+ G   ELRK   ++D A S+L Y+LPLKIVKYPD RLRAKN  +  FDE LQ L   M
Sbjct: 82  ARRGFLSELRKMKEEEDFA-SELQYELPLKIVKYPDSRLRAKNKPINIFDEKLQRLADEM 140

Query: 325 FDIMYRTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCL 504
           FD+MY+TDG GLSAPQVGVNVQLMVFNPAGE GKGEE++LVNPEIYKYS + +V  EGCL
Sbjct: 141 FDLMYKTDGVGLSAPQVGVNVQLMVFNPAGESGKGEEVILVNPEIYKYSKRKEVFTEGCL 200

Query: 505 SFPNIYGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTL 684
           SFP IY D+ERP+SVKI+AWD KGKKFIL+LKEF+ARIFQHEYDHL+ ILFFERM P  L
Sbjct: 201 SFPEIYADVERPMSVKIEAWDVKGKKFILSLKEFNARIFQHEYDHLQRILFFERMHPDIL 260

Query: 685 EIVRPSLQDLEQKYESETGM 744
           E +RP+LQDLEQKYE  TGM
Sbjct: 261 ETIRPALQDLEQKYEIRTGM 280


>ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [Amborella trichopoda]
           gi|548842467|gb|ERN02397.1| hypothetical protein
           AMTR_s00096p00105910 [Amborella trichopoda]
          Length = 273

 Score =  251 bits (641), Expect = 2e-64
 Identities = 119/180 (66%), Positives = 146/180 (81%)
 Frame = +1

Query: 205 SDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVN 384
           +DL Y+ PLKIV+YPDPRLR +N RV  FDE+L+ LV  MFD+MY+TDG GLSAPQVG+N
Sbjct: 73  ADLSYEAPLKIVEYPDPRLRVRNKRVSVFDENLKELVAEMFDVMYKTDGIGLSAPQVGIN 132

Query: 385 VQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAW 564
           VQLMVFNPAGE G+GEE+VL+NP++YKYS K  + +EGCLSFP IY D+ERP SVKI A 
Sbjct: 133 VQLMVFNPAGERGEGEELVLINPKVYKYSKKLVLFDEGCLSFPGIYADVERPTSVKIDAR 192

Query: 565 DAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
           D  G KF ++LK   AR+FQHE+DHL+GILFFERM  + LE +RP LQ LE+KYE+ TG+
Sbjct: 193 DITGAKFSVHLKGLPARVFQHEFDHLQGILFFERMTEEVLESIRPGLQALEKKYETLTGL 252


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  247 bits (631), Expect = 3e-63
 Identities = 119/190 (62%), Positives = 149/190 (78%), Gaps = 1/190 (0%)
 Frame = +1

Query: 178 SVADKDIAVS-DLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGC 354
           S  + D+A S DL ++ PLKIV+YPDP LRAKN R+  FD++L+ LV+ MFD+MY+TDG 
Sbjct: 64  SAKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDDNLKKLVQEMFDVMYKTDGI 123

Query: 355 GLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIE 534
           GLSAPQVGVNVQLMVFN  GE G+GEEIVLVNP++Y+YS KT + NEGCLSFP IY D+E
Sbjct: 124 GLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPMIYADVE 183

Query: 535 RPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDL 714
           RP S+KI A D  G +F++NL    AR+FQHE+DHL+G LFF+RM  + LE +RP LQ L
Sbjct: 184 RPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQAL 243

Query: 715 EQKYESETGM 744
           E+KYE  TG+
Sbjct: 244 EKKYEDRTGL 253


>ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Capsella rubella]
           gi|482557139|gb|EOA21331.1| hypothetical protein
           CARUB_v10001691mg [Capsella rubella]
          Length = 273

 Score =  245 bits (626), Expect = 1e-62
 Identities = 128/233 (54%), Positives = 159/233 (68%), Gaps = 10/233 (4%)
 Frame = +1

Query: 76  SFSRSRFPLLSTHGITSSVSKVFAKIGLKEELRKSVA----------DKDIAVSDLHYDL 225
           + SR    L + HG+  S     + +     L   V           D+  + SDL ++ 
Sbjct: 20  ALSRRDSTLTAGHGLLKSTGMFSSAVNRSTPLTSPVRAAVKRVPRKEDEVASASDLEFET 79

Query: 226 PLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQLMVFN 405
           PLKIV+YPDP LRAKN R+  FDE+L+ LV AMFDIMY+TDG GLSAPQVG+NVQLMVFN
Sbjct: 80  PLKIVEYPDPILRAKNKRIGVFDENLKNLVDAMFDIMYKTDGIGLSAPQVGLNVQLMVFN 139

Query: 406 PAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAKGKKF 585
           PAGEPG+GEEIVLVNP+I KYS K    +EGCLSFP IY ++ RP SVKI A D  G KF
Sbjct: 140 PAGEPGEGEEIVLVNPKINKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGAKF 199

Query: 586 ILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
            ++L    ARIFQHEYDHLEG+LFF+RM  + L+ +R  L+ LE+KYE +TG+
Sbjct: 200 SISLSRLPARIFQHEYDHLEGVLFFDRMTDEVLDSIREELEALEKKYEEKTGL 252


>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
           gi|566152890|ref|XP_006369926.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|566152892|ref|XP_006369927.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348928|gb|EEE84852.2| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348929|gb|ERP66495.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348930|gb|ERP66496.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
          Length = 268

 Score =  244 bits (624), Expect = 2e-62
 Identities = 117/185 (63%), Positives = 145/185 (78%)
 Frame = +1

Query: 187 DKDIAVSDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSA 366
           D+  A SDL ++ PLKIV+YPDP LRAKN R+  FD++L+ LV  MFD+MY+TDG GLSA
Sbjct: 62  DQVAATSDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSA 121

Query: 367 PQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPIS 546
           PQVG+NVQLMVFNPA E G+G+EIVLVNP + KYS KT + NEGCLSFP IY D++RP S
Sbjct: 122 PQVGINVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPES 181

Query: 547 VKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKY 726
           VKI A D  G +F +NL    AR+FQHE+DHL+GILFF+RM  + L+ +RP LQ LE+KY
Sbjct: 182 VKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKY 241

Query: 727 ESETG 741
           E +TG
Sbjct: 242 EDKTG 246


>gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]
          Length = 273

 Score =  244 bits (622), Expect = 3e-62
 Identities = 122/212 (57%), Positives = 157/212 (74%)
 Frame = +1

Query: 109 THGITSSVSKVFAKIGLKEELRKSVADKDIAVSDLHYDLPLKIVKYPDPRLRAKNMRVKC 288
           T  +TSSV     ++  K+       DK  + +D+ ++ PLKIV+YPDP LRAKN R+  
Sbjct: 48  TSPLTSSVRAEVKRVSRKD-------DKVASATDVQFETPLKIVEYPDPILRAKNKRIDI 100

Query: 289 FDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKY 468
           FDE+L+ LV AMFD+MY+TDG GLSAPQVG+NVQLMVFNPAGEPG+G+EIVLVNP+I KY
Sbjct: 101 FDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKY 160

Query: 469 SVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEG 648
           S K    +EGCLSFP IY ++ RP SVKI A D  G++F ++L    ARIFQHEYDHLEG
Sbjct: 161 SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSSLPARIFQHEYDHLEG 220

Query: 649 ILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
           +LFF+RM  + L+ +R  L+ LE+KYE +TG+
Sbjct: 221 VLFFDRMTDQVLDSIREELEALEKKYEEKTGL 252


>ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana]
           gi|30684999|ref|NP_850821.1| peptide deformylase 1B
           [Arabidopsis thaliana]
           gi|39932734|sp|Q9FUZ2.2|DEF1B_ARATH RecName:
           Full=Peptide deformylase 1B,
           chloroplastic/mitochondrial; Short=AtDEF2;
           Short=AtPDF1B; Short=PDF 1B; AltName: Full=Polypeptide
           deformylase; Flags: Precursor gi|7573315|emb|CAB87633.1|
           putative protein [Arabidopsis thaliana]
           gi|15292891|gb|AAK92816.1| unknown protein [Arabidopsis
           thaliana] gi|20465677|gb|AAM20307.1| unknown protein
           [Arabidopsis thaliana] gi|332004676|gb|AED92059.1|
           peptide deformylase 1B [Arabidopsis thaliana]
           gi|332004677|gb|AED92060.1| peptide deformylase 1B
           [Arabidopsis thaliana]
          Length = 273

 Score =  244 bits (622), Expect = 3e-62
 Identities = 122/212 (57%), Positives = 157/212 (74%)
 Frame = +1

Query: 109 THGITSSVSKVFAKIGLKEELRKSVADKDIAVSDLHYDLPLKIVKYPDPRLRAKNMRVKC 288
           T  +TSSV     ++  K+       DK  + +D+ ++ PLKIV+YPDP LRAKN R+  
Sbjct: 48  TSPLTSSVRAEVKRVSRKD-------DKVASATDVQFETPLKIVEYPDPILRAKNKRIDI 100

Query: 289 FDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKY 468
           FDE+L+ LV AMFD+MY+TDG GLSAPQVG+NVQLMVFNPAGEPG+G+EIVLVNP+I KY
Sbjct: 101 FDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKY 160

Query: 469 SVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEG 648
           S K    +EGCLSFP IY ++ RP SVKI A D  G++F ++L    ARIFQHEYDHLEG
Sbjct: 161 SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEG 220

Query: 649 ILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
           +LFF+RM  + L+ +R  L+ LE+KYE +TG+
Sbjct: 221 VLFFDRMTDQVLDSIREELEALEKKYEEKTGL 252


>gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]
          Length = 273

 Score =  243 bits (620), Expect = 5e-62
 Identities = 121/209 (57%), Positives = 156/209 (74%)
 Frame = +1

Query: 118 ITSSVSKVFAKIGLKEELRKSVADKDIAVSDLHYDLPLKIVKYPDPRLRAKNMRVKCFDE 297
           +TSSV     ++  K+       DK  + +D+ ++ PLKIV+YPDP LRAKN R+  FDE
Sbjct: 51  LTSSVRAEVKRVSRKD-------DKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDE 103

Query: 298 SLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVK 477
           +L+ LV AMFD+MY+TDG GLSAPQVG+NVQLMVFNPAGEPG+G+EIVLVNP+I KYS K
Sbjct: 104 NLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDK 163

Query: 478 TDVLNEGCLSFPNIYGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILF 657
               +EGCLSFP IY ++ RP SVKI A D  G++F ++L    ARIFQHEYDHLEG+LF
Sbjct: 164 LVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLF 223

Query: 658 FERMDPKTLEIVRPSLQDLEQKYESETGM 744
           F+RM  + L+ +R  L+ LE+KYE +TG+
Sbjct: 224 FDRMTDQVLDSIREELEALEKKYEEKTGL 252


>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 275

 Score =  243 bits (619), Expect = 6e-62
 Identities = 125/229 (54%), Positives = 162/229 (70%)
 Frame = +1

Query: 58  FHRRNISFSRSRFPLLSTHGITSSVSKVFAKIGLKEELRKSVADKDIAVSDLHYDLPLKI 237
           FHR   +FS +  PL + +  T+  ++      LKE       D+  + +D+ ++ PL+I
Sbjct: 32  FHRF-CTFSSADRPLSTANRFTAVRAQAKRGFSLKE-------DQVASAADVEFETPLEI 83

Query: 238 VKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQLMVFNPAGE 417
           V+YPDP LRAKN R+  FD++L+ LV+ MFDIMYRTDG GLSAPQVG+NVQLMVFNP GE
Sbjct: 84  VEYPDPILRAKNKRLDTFDDNLKKLVEEMFDIMYRTDGIGLSAPQVGINVQLMVFNPVGE 143

Query: 418 PGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAKGKKFILNL 597
            G+GEEIVLVNP + +YS KT + NEGCLSFP IY D++RP SVKI A D  G +F +NL
Sbjct: 144 RGEGEEIVLVNPRVSRYSQKTRLFNEGCLSFPGIYADVQRPESVKIDARDISGARFTVNL 203

Query: 598 KEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
               AR+FQHE+DHL+GILFF+RM    LE +   LQ LE+KYE +TG+
Sbjct: 204 SGLPARVFQHEFDHLQGILFFDRMTEGVLESISEQLQALEKKYEDKTGL 252


>gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
           gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
          Length = 278

 Score =  242 bits (618), Expect = 8e-62
 Identities = 127/237 (53%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
 Frame = +1

Query: 46  NTLNFHRRNISFSRSRFPLLSTHGITSSVSKVFAKIG-LKEELRKSVADKDIAVS---DL 213
           +T   HR N   S +RF        TSS+++   ++  +  + ++    KD  V+   DL
Sbjct: 29  STAFLHRLNRFTSPARF--------TSSLNQTNPQLTPVHAQAKRGFLSKDDEVASMEDL 80

Query: 214 HYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQL 393
            +D PLKIV+YPDP LR +N R+  FDE+L+ LV  MFD+MY+TDG GLSAPQVGVNVQL
Sbjct: 81  RFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMFDVMYKTDGIGLSAPQVGVNVQL 140

Query: 394 MVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAK 573
           MVFNP GE G+G+EIVLVNP + KYS KT + NEGCLSFP IY D+ERP S+KI A D  
Sbjct: 141 MVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLSFPRIYADVERPESIKIDARDVN 200

Query: 574 GKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
           G +F +NL    ARIFQHE+DHL+GILFF+RM  + L+ +R  L+ LE+KYE  TG+
Sbjct: 201 GARFTVNLSGLRARIFQHEFDHLQGILFFDRMTGEVLDSIRAQLEALEKKYEDTTGL 257


>ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319520|gb|EFH49942.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  241 bits (616), Expect = 1e-61
 Identities = 120/193 (62%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
 Frame = +1

Query: 175 KSVADKDIAV---SDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRT 345
           K V+ KD+ V   SDL ++ PL+IV+YPDP LRAKN R+  FD++L+ LV AMFD+MY+T
Sbjct: 60  KRVSRKDVEVASASDLQFETPLRIVEYPDPILRAKNKRIGVFDQNLKNLVDAMFDVMYKT 119

Query: 346 DGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYG 525
           DG GLSAPQVG+NVQLMVFNPAGEPG+GEEIVLVNP I KYS K    +EGCLSFP IY 
Sbjct: 120 DGIGLSAPQVGLNVQLMVFNPAGEPGEGEEIVLVNPIIKKYSDKLVPFDEGCLSFPGIYA 179

Query: 526 DIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSL 705
           ++ RP SVKI A D  G++F ++L    ARIFQHEYDHLEG+LFF+RM  + L+ +R  L
Sbjct: 180 EVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREEL 239

Query: 706 QDLEQKYESETGM 744
           + LE+KYE +TG+
Sbjct: 240 EALEKKYEEKTGL 252


>pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal Structure
          Length = 193

 Score =  241 bits (615), Expect = 2e-61
 Identities = 116/186 (62%), Positives = 147/186 (79%)
 Frame = +1

Query: 187 DKDIAVSDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSA 366
           DK  + +D+ ++ PLKIV+YPDP LRAKN R+  FDE+L+ LV AMFD+MY+TDG GLSA
Sbjct: 3   DKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSA 62

Query: 367 PQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPIS 546
           PQVG+NVQLMVFNPAGEPG+G+EIVLVNP+I KYS K    +EGCLSFP IY ++ RP S
Sbjct: 63  PQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQS 122

Query: 547 VKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKY 726
           VKI A D  G++F ++L    ARIFQHEYDHLEG+LFF+RM  + L+ +R  L+ LE+KY
Sbjct: 123 VKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKY 182

Query: 727 ESETGM 744
           E +TG+
Sbjct: 183 EEKTGL 188


>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  241 bits (615), Expect = 2e-61
 Identities = 135/259 (52%), Positives = 170/259 (65%), Gaps = 13/259 (5%)
 Frame = +1

Query: 4   SLLLNSFTPFIS-----SSNTLNFHRRNI------SFSRSRFPLLSTHGITSSVSKVFAK 150
           S L N+F P +      S++T + HR         S +R R PL+          +V AK
Sbjct: 10  SYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQV--------QVQAK 61

Query: 151 IGL--KEELRKSVADKDIAVSDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAM 324
            G   KEE+  S AD       L ++ PLKIV+YPDP LRAKN  +  FD++L+ LV  M
Sbjct: 62  RGFSFKEEVIASPAD-------LSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEM 114

Query: 325 FDIMYRTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCL 504
           FD+MY+TDG GLSAPQVG+NVQLMVFNP GE G+GEEIVLVNP + KYS K  + NEGCL
Sbjct: 115 FDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCL 174

Query: 505 SFPNIYGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTL 684
           SFP IY D+ERP SVKI A D  G +F++NL    AR+FQHE+DHL+G LFF+RM  + L
Sbjct: 175 SFPGIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVL 234

Query: 685 EIVRPSLQDLEQKYESETG 741
           + +  +LQDLE+KYE  TG
Sbjct: 235 DSIHANLQDLERKYEDRTG 253


>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
           gi|550348931|gb|ERP66497.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
          Length = 269

 Score =  240 bits (613), Expect = 3e-61
 Identities = 114/178 (64%), Positives = 141/178 (79%)
 Frame = +1

Query: 208 DLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNV 387
           DL ++ PLKIV+YPDP LRAKN R+  FD++L+ LV  MFD+MY+TDG GLSAPQVG+NV
Sbjct: 70  DLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINV 129

Query: 388 QLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAWD 567
           QLMVFNPA E G+G+EIVLVNP + KYS KT + NEGCLSFP IY D++RP SVKI A D
Sbjct: 130 QLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARD 189

Query: 568 AKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKYESETG 741
             G +F +NL    AR+FQHE+DHL+GILFF+RM  + L+ +RP LQ LE+KYE +TG
Sbjct: 190 INGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTG 247


>gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
          Length = 271

 Score =  240 bits (612), Expect = 4e-61
 Identities = 117/190 (61%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
 Frame = +1

Query: 178 SVADKDIAVS-DLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGC 354
           SV + ++A + D+ ++ PLKIV+YPDP LRAKN R+  FDE+L++LV  MFDIMY+TDG 
Sbjct: 61  SVKEDEVATAADVEFETPLKIVEYPDPILRAKNKRIDSFDENLKILVDEMFDIMYKTDGI 120

Query: 355 GLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIE 534
           GLSAPQVG+NVQLMVFNP GE G+GEEIVLVNP + +YS KT   NEGCLSFP IY D+ 
Sbjct: 121 GLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVSRYSQKTRPFNEGCLSFPGIYADVV 180

Query: 535 RPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDL 714
           RP SVKI A D  G +F +NL    AR+FQHE+DHL+GILFF+RM    LE +   LQ L
Sbjct: 181 RPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMSEGVLETICAQLQTL 240

Query: 715 EQKYESETGM 744
           E+KYE +TG+
Sbjct: 241 EKKYEDKTGL 250


>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score =  239 bits (610), Expect = 7e-61
 Identities = 124/231 (53%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
 Frame = +1

Query: 58  FHRRNISFSRSRFPLLSTHGITSSVSKVFAKIGLKEELRKSVADKDIAVS---DLHYDLP 228
           F +   S +  RF  LS+    SS++K    I ++ + ++S + K+  ++   DL ++ P
Sbjct: 31  FRQTGFSCNNFRFNQLSSTARFSSIAKP-PSIPVRAQAKRSFSFKEEEIATPADLCFEEP 89

Query: 229 LKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQLMVFNP 408
           LKIV+YPDP LR KN R+  FD++L+ LV  MFD+MY+TDG GLSAPQVG+NVQLMVFNP
Sbjct: 90  LKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNP 149

Query: 409 AGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAKGKKFI 588
            GE G+GEEIVL+NP + KYS K    NEGCLSFP IY D+ RP SVKI A D  G +F 
Sbjct: 150 VGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFT 209

Query: 589 LNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRPSLQDLEQKYESETG 741
           +NL    AR+FQHEYDHLEGILFF+RM  + L+ +R  LQ LE+K+E +TG
Sbjct: 210 VNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEKKFEDKTG 260


>ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutrema salsugineum]
           gi|557101069|gb|ESQ41432.1| hypothetical protein
           EUTSA_v10014367mg [Eutrema salsugineum]
          Length = 273

 Score =  239 bits (609), Expect = 9e-61
 Identities = 121/195 (62%), Positives = 149/195 (76%), Gaps = 1/195 (0%)
 Frame = +1

Query: 163 EELRKSVADKDIA-VSDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMY 339
           E  R S  D ++A VSDL ++ PLKIV+YPDP LRAKN R+  FDE+L+ LV AMF +MY
Sbjct: 58  EVKRLSRKDDEVASVSDLQFETPLKIVEYPDPILRAKNKRIGVFDENLKNLVDAMFHVMY 117

Query: 340 RTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNI 519
           +TDG GLSAPQVG+NVQLMVFNPAGE G+GEEIVLVNP+I KYS K    +EGCLSFP I
Sbjct: 118 KTDGVGLSAPQVGLNVQLMVFNPAGERGEGEEIVLVNPKINKYSDKLVPFSEGCLSFPGI 177

Query: 520 YGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKTLEIVRP 699
           Y D+ RP SVKI A D  G +F ++L    ARIFQHEYDHLEG+LFF++M  + L+ +R 
Sbjct: 178 YADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDKMTDQVLDSIRE 237

Query: 700 SLQDLEQKYESETGM 744
            L+ LE+KYE +TG+
Sbjct: 238 ELEALEKKYEEKTGL 252


>gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
          Length = 279

 Score =  238 bits (606), Expect = 2e-60
 Identities = 127/238 (53%), Positives = 164/238 (68%), Gaps = 5/238 (2%)
 Frame = +1

Query: 46  NTLNFHRRNISFSRSRFPLLSTHGITSSVSKVFAKIG-LKEELRKSVADKDIAVS---DL 213
           +T   HR N   S +RF        TSS+++   ++  +  + ++    KD  V+   DL
Sbjct: 29  STAFLHRLNRFTSPARF--------TSSLNQTNPQLTPVHAQAKRGFLSKDDEVASMEDL 80

Query: 214 HYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQL 393
            +D PLKIV+YPDP LR +N R+  FDE+L+ LV  MFD+MY+TDG GLSAPQVGVNVQL
Sbjct: 81  RFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMFDVMYKTDGIGLSAPQVGVNVQL 140

Query: 394 MVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAK 573
           MVFNP GE G+G+EIVLVNP + KYS KT + NEGCLSFP IY D+ERP S+KI A D  
Sbjct: 141 MVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLSFPRIYADVERPESIKIDARDVN 200

Query: 574 GKKFILNLKEFHARIFQHEYDHL-EGILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
           G +F +NL    ARIFQHE+DHL +GILFF+RM  + L+ +R  L+ LE+KYE  TG+
Sbjct: 201 GARFTVNLSGLRARIFQHEFDHLQQGILFFDRMTGEVLDSIRAQLEALEKKYEDTTGL 258


>gb|AFW83381.1| hypothetical protein ZEAMMB73_684024 [Zea mays]
           gi|413950733|gb|AFW83382.1| hypothetical protein
           ZEAMMB73_684024 [Zea mays]
          Length = 264

 Score =  234 bits (596), Expect = 3e-59
 Identities = 118/201 (58%), Positives = 146/201 (72%), Gaps = 1/201 (0%)
 Frame = +1

Query: 145 AKIGLKEELRKSVADKDIAV-SDLHYDLPLKIVKYPDPRLRAKNMRVKCFDESLQVLVKA 321
           A+ GL      +  D+D A  SDL ++ PL++VKYPDP LRA+N R+  FD++L+ L   
Sbjct: 44  ARRGLGSSTANAQLDEDFATASDLRFESPLEVVKYPDPVLRARNKRINTFDDNLRALADE 103

Query: 322 MFDIMYRTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVNPEIYKYSVKTDVLNEGC 501
           MFD+MY+TDG GLSAPQVGVNVQLMVFNPAG  G+GEEIVLVNP IYK + +  V  EGC
Sbjct: 104 MFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVIYKSAKRLLVFEEGC 163

Query: 502 LSFPNIYGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHEYDHLEGILFFERMDPKT 681
           LSFP IYG++ RP SVKI+A D  G K  + L   HAR+FQHE+DHL GILFF+RM    
Sbjct: 164 LSFPGIYGNVVRPESVKIEAQDVTGAKIKVKLSGIHARVFQHEFDHLLGILFFDRMTIDV 223

Query: 682 LEIVRPSLQDLEQKYESETGM 744
           LE VR  L++LE+KYE  TG+
Sbjct: 224 LETVREELKNLEKKYEEITGL 244


>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
           [Citrus sinensis] gi|568832146|ref|XP_006470304.1|
           PREDICTED: peptide deformylase 1B, chloroplastic-like
           isoform X2 [Citrus sinensis]
           gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
           deformylase 1B, chloroplastic-like isoform X3 [Citrus
           sinensis]
          Length = 282

 Score =  232 bits (591), Expect = 1e-58
 Identities = 119/218 (54%), Positives = 154/218 (70%), Gaps = 3/218 (1%)
 Frame = +1

Query: 100 LLSTHGITSSVSKVFAKIGLKEELRKSVADKDIAVS---DLHYDLPLKIVKYPDPRLRAK 270
           L ST  + SS ++    +  + + R   + K+  V+   DL ++ PLKIV+YPDP LRAK
Sbjct: 44  LYSTARLFSSPNRTNLPLLTQAKRRYGFSTKEDPVASPADLRFERPLKIVEYPDPILRAK 103

Query: 271 NMRVKCFDESLQVLVKAMFDIMYRTDGCGLSAPQVGVNVQLMVFNPAGEPGKGEEIVLVN 450
           N R+  FD++L+ LV  MFD MY+TDG GLSAPQVG+NVQLMVFNP GE G+GEEIVLVN
Sbjct: 104 NKRIDTFDDNLKKLVDEMFDFMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVN 163

Query: 451 PEIYKYSVKTDVLNEGCLSFPNIYGDIERPISVKIKAWDAKGKKFILNLKEFHARIFQHE 630
           P + KYS K     EGCLSFP I+ D+ERP SVKI A D  G +F ++L +  AR+FQHE
Sbjct: 164 PRVNKYSNKMIPYEEGCLSFPGIHADVERPESVKIDARDINGARFSVSLSDLPARVFQHE 223

Query: 631 YDHLEGILFFERMDPKTLEIVRPSLQDLEQKYESETGM 744
           +DHL+GILFFERM    L+ +R  L+ LE+KYE +TG+
Sbjct: 224 FDHLQGILFFERMTDDVLDSIREQLEALEKKYEDKTGL 261