BLASTX nr result
ID: Ephedra27_contig00007295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00007295
(2652 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904... 456 e-125
gb|EOX95959.1| Mediator of RNA polymerase II transcription subun... 444 e-121
gb|EOX95958.1| Mediator of RNA polymerase II transcription subun... 444 e-121
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 441 e-121
gb|EOX95957.1| Mediator of RNA polymerase II transcription subun... 438 e-120
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra... 432 e-118
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr... 425 e-116
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr... 425 e-116
gb|EXC06808.1| Putative mediator of RNA polymerase II transcript... 424 e-115
ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [A... 423 e-115
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra... 422 e-115
ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra... 422 e-115
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra... 419 e-114
ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II tra... 416 e-113
ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II tra... 411 e-112
gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus pe... 410 e-111
ref|XP_006602803.1| PREDICTED: mediator of RNA polymerase II tra... 409 e-111
ref|XP_006602801.1| PREDICTED: mediator of RNA polymerase II tra... 409 e-111
ref|XP_006286877.1| hypothetical protein CARUB_v10000021mg [Caps... 408 e-111
gb|EMT17889.1| Putative mediator of RNA polymerase II transcript... 403 e-109
>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
putative [Ricinus communis]
Length = 2264
Score = 456 bits (1172), Expect = e-125
Identities = 295/788 (37%), Positives = 439/788 (55%), Gaps = 49/788 (6%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
+ L+ +EISLS V + F +K ++ +E+IRK LRAIN +R QK KAGQVYGVPLSG L
Sbjct: 95 EGLEEAREISLSQV-QAFSSKPVVLKCREAIRKCLRAINESRAQKRKAGQVYGVPLSGSL 153
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQ+ EDFK+ WIEGLSQPHK L SLA+ VPHGYRKK+LF LI++NVPLL
Sbjct: 154 LAKPGVFPEQKPCGEDFKKKWIEGLSQPHKRLRSLADHVPHGYRKKSLFEVLIRNNVPLL 213
Query: 733 RAT*FI*IC-------MSTAFLKKLVNPMQNNIIEINSQH-----RNI*EDLCSINALKV 876
RAT FI + S + + Q + E+ ++ + + ++ S N
Sbjct: 214 RATWFIKVTYLNQVRPSSASISSGTPDKTQLSRTELWTKDVIEYLQILLDEFFSRNNSHS 273
Query: 877 LKQPRGRSRHYMLNGII-------------------------MQLLYWHFAEGLVHRATV 981
R RS + G + ++LL+WH +EGL+ + +
Sbjct: 274 ALHTRDRSPQMLYAGSVQYRSDPATFSIDGEEPSLHFKWWYVVRLLHWHHSEGLLLPSII 333
Query: 982 IDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPA 1161
IDW L QLQE+ L+ L++LLP++ +D+++LSQ++VRT + ++R PS
Sbjct: 334 IDWVLSQLQEKDLLEILQLLLPIIYGVLDSVVLSQTYVRTLAGIAVHYIR--EPSPGGSD 391
Query: 1162 LKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSK 1341
L DN+R AY E+LR I+ VPDT V++DCFPLP V ++ ++
Sbjct: 392 LVDNSRRAYTTSALIEMLRYLILAVPDTFVAVDCFPLPPSVMSYAVNDGVF-------VS 444
Query: 1342 GLSADLNISKQESAD--SLVERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNN 1506
S + +K SA + K D + S ++SIQKR NLAK+ CPG L ++
Sbjct: 445 RASEEARKTKDNSAGVVGVFRSKGLDAQYQSFSFNQVVLSIQKREDNLAKAACPGYLVHS 504
Query: 1507 QGKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTE 1686
K VQ+LD+AL LGD+K AY+ +FE F ++ WI +++PC+RSSL++M +++ +
Sbjct: 505 AAKAVQALDKALILGDIKEAYNFLFEN-FCDGAVDGGWIEEVSPCLRSSLKWMGSVDLSF 563
Query: 1687 IYAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQK--TSKSD 1860
+ +VFFLCEWAT +R+ R A P K TG++D S++YIA ++ +K ++LQ K++
Sbjct: 564 VCSVFFLCEWATCDYRDFRTAPPHDLKFTGRKDFSQVYIATRLLKLKFRDLQSKPRRKNE 623
Query: 1861 KESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFVQSRGPIHD 2040
K G N +S V GR R +I + + +S+ +S GP+HD
Sbjct: 624 KSLGINSLAKGLSQHNYV-GRAHVRSGYETIGNSKIVNAK----STNSSDIFESPGPLHD 678
Query: 2041 AIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERA 2220
IV W+D+HE + R GLK+L++L++E IRSGIF Y+RQLIISG +D +VE++R
Sbjct: 679 IIVCWIDQHEVQKREGLKRLQLLIVELIRSGIFYPQSYVRQLIISGIMDANVPAVELDRR 738
Query: 2221 NWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESK 2400
H IL++LP F+ EE ++ P E++ +YSNERR +L + +D
Sbjct: 739 KRHYQILKQLPGLFIHDILEEARIAEGPELLEAMLIYSNERRLLLCGILSEQCQD----S 794
Query: 2401 VKANFSV-----NSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHII 2565
VK+N SV ++ S+ D + + + L K K+ I ELK I
Sbjct: 795 VKSNISVQKQKHHTTSIKDSASSASFDQWRTIQSQSNLLTKKIKRNAD----IKELKSSI 850
Query: 2566 SNILHFPD 2589
S +L P+
Sbjct: 851 SLLLQLPN 858
>gb|EOX95959.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
[Theobroma cacao]
Length = 2257
Score = 444 bits (1141), Expect = e-121
Identities = 294/781 (37%), Positives = 426/781 (54%), Gaps = 43/781 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
D L+ +KEISL+ V Q + K ++ +++IRK LRAIN +R QK KAGQVYGVPLSG L
Sbjct: 95 DGLEDSKEISLTQV--QAFTKPVVLKCRDAIRKCLRAINESRAQKRKAGQVYGVPLSGAL 152
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQR EDF++ WIEGLSQ HK L SLA+ VPHGYRKK L LI++NVPLL
Sbjct: 153 LSKPGVFPEQRPCNEDFRKKWIEGLSQQHKRLRSLADQVPHGYRKKTLIEVLIRNNVPLL 212
Query: 733 RAT*FI*ICM----------------------STAFLKKLVNPMQNNIIEI----NSQHR 834
RAT FI + + + K +++ +Q + E NS
Sbjct: 213 RATWFIKVTYLNQVHPGSAISSGAPDKAQLSRTELWTKDVIDYLQTLLDEFFPKSNSHST 272
Query: 835 NI*EDLCSINALKVLKQPRGRSRHYMLNG----------IIMQLLYWHFAEGLVHRATVI 984
D Q R S +L+G +++LL WH AEGLV + +I
Sbjct: 273 QHSRDRLPQMLYAGSLQHRIDSASTILDGGEPSLHFKWWYVVRLLQWHHAEGLVLPSLII 332
Query: 985 DWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPAL 1164
DW L QLQE+ + L++LLP++ ++TIIL Q++VR V I+++R PS L
Sbjct: 333 DWLLNQLQEKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIRE--PSPGGSDL 390
Query: 1165 KDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKG 1344
DN+R AY + E+LR I VPDT V+LDCFPLP CV + L G
Sbjct: 391 VDNSRRAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVS-------HALNDGGFLSK 443
Query: 1345 LSADLNISKQESADSLVER----KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQG 1512
S D K SAD+ V R + +S + + +IQKRA NLAK G +
Sbjct: 444 SSDDAGKIKHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPSQSVA 503
Query: 1513 KVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIY 1692
K VQ+LD+AL GD+ AY +FE + G ++ + W+++++PC+RSSL+++ T+ + I
Sbjct: 504 KAVQTLDKALLQGDLMEAYKHIFENLCDG-AVREGWVAEVSPCLRSSLKWIQTVNLSLIC 562
Query: 1693 AVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTS-KSDKES 1869
+VFFLCEWAT FR+ R A P K TG++D S++Y+A+ ++ +K++ELQ K+ + S
Sbjct: 563 SVFFLCEWATCDFRDFRTAPPRDLKFTGRKDFSQMYLAIQLLKLKIRELQNPEHKNGRAS 622
Query: 1870 GNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDG-NAVASEFVQSRGPIHDAI 2046
G N IS + R + + S +++ DG N+ +S+ S GP+HD I
Sbjct: 623 GVNSTAKNISQQNNYSRRNLSGNLFEVKSKVRVV-----DGRNSNSSDIFDSPGPLHDII 677
Query: 2047 VLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANW 2226
V W+D+HE G K+L++ +LE IRSGIF Y+RQLI+SG +D + +R
Sbjct: 678 VCWIDQHEGHKGEGGKRLQLFVLELIRSGIFYPQAYVRQLIVSGIIDTNGPVSDFDRRKR 737
Query: 2227 HKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESKVK 2406
H IL++LP F+ EE ++ + E++ VYSNERR VL + + + V
Sbjct: 738 HHRILKQLPGQFMCDVLEEARIAVGSELLEAVNVYSNERRLVLHGLLSDQYSNANNAHVS 797
Query: 2407 A-NFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHIISNILHF 2583
A +S S + ++K + +K +R++ L ELK IS +L F
Sbjct: 798 AKKQKYHSTSGRNGASQASGDQRK--------TVQSSKAFRREVDL-EELKASISVLLQF 848
Query: 2584 P 2586
P
Sbjct: 849 P 849
>gb|EOX95958.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
[Theobroma cacao]
Length = 2237
Score = 444 bits (1141), Expect = e-121
Identities = 294/781 (37%), Positives = 426/781 (54%), Gaps = 43/781 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
D L+ +KEISL+ V Q + K ++ +++IRK LRAIN +R QK KAGQVYGVPLSG L
Sbjct: 95 DGLEDSKEISLTQV--QAFTKPVVLKCRDAIRKCLRAINESRAQKRKAGQVYGVPLSGAL 152
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQR EDF++ WIEGLSQ HK L SLA+ VPHGYRKK L LI++NVPLL
Sbjct: 153 LSKPGVFPEQRPCNEDFRKKWIEGLSQQHKRLRSLADQVPHGYRKKTLIEVLIRNNVPLL 212
Query: 733 RAT*FI*ICM----------------------STAFLKKLVNPMQNNIIEI----NSQHR 834
RAT FI + + + K +++ +Q + E NS
Sbjct: 213 RATWFIKVTYLNQVHPGSAISSGAPDKAQLSRTELWTKDVIDYLQTLLDEFFPKSNSHST 272
Query: 835 NI*EDLCSINALKVLKQPRGRSRHYMLNG----------IIMQLLYWHFAEGLVHRATVI 984
D Q R S +L+G +++LL WH AEGLV + +I
Sbjct: 273 QHSRDRLPQMLYAGSLQHRIDSASTILDGGEPSLHFKWWYVVRLLQWHHAEGLVLPSLII 332
Query: 985 DWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPAL 1164
DW L QLQE+ + L++LLP++ ++TIIL Q++VR V I+++R PS L
Sbjct: 333 DWLLNQLQEKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIRE--PSPGGSDL 390
Query: 1165 KDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKG 1344
DN+R AY + E+LR I VPDT V+LDCFPLP CV + L G
Sbjct: 391 VDNSRRAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVS-------HALNDGGFLSK 443
Query: 1345 LSADLNISKQESADSLVER----KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQG 1512
S D K SAD+ V R + +S + + +IQKRA NLAK G +
Sbjct: 444 SSDDAGKIKHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPSQSVA 503
Query: 1513 KVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIY 1692
K VQ+LD+AL GD+ AY +FE + G ++ + W+++++PC+RSSL+++ T+ + I
Sbjct: 504 KAVQTLDKALLQGDLMEAYKHIFENLCDG-AVREGWVAEVSPCLRSSLKWIQTVNLSLIC 562
Query: 1693 AVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTS-KSDKES 1869
+VFFLCEWAT FR+ R A P K TG++D S++Y+A+ ++ +K++ELQ K+ + S
Sbjct: 563 SVFFLCEWATCDFRDFRTAPPRDLKFTGRKDFSQMYLAIQLLKLKIRELQNPEHKNGRAS 622
Query: 1870 GNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDG-NAVASEFVQSRGPIHDAI 2046
G N IS + R + + S +++ DG N+ +S+ S GP+HD I
Sbjct: 623 GVNSTAKNISQQNNYSRRNLSGNLFEVKSKVRVV-----DGRNSNSSDIFDSPGPLHDII 677
Query: 2047 VLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANW 2226
V W+D+HE G K+L++ +LE IRSGIF Y+RQLI+SG +D + +R
Sbjct: 678 VCWIDQHEGHKGEGGKRLQLFVLELIRSGIFYPQAYVRQLIVSGIIDTNGPVSDFDRRKR 737
Query: 2227 HKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESKVK 2406
H IL++LP F+ EE ++ + E++ VYSNERR VL + + + V
Sbjct: 738 HHRILKQLPGQFMCDVLEEARIAVGSELLEAVNVYSNERRLVLHGLLSDQYSNANNAHVS 797
Query: 2407 A-NFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHIISNILHF 2583
A +S S + ++K + +K +R++ L ELK IS +L F
Sbjct: 798 AKKQKYHSTSGRNGASQASGDQRK--------TVQSSKAFRREVDL-EELKASISVLLQF 848
Query: 2584 P 2586
P
Sbjct: 849 P 849
>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
Length = 2272
Score = 441 bits (1135), Expect = e-121
Identities = 276/781 (35%), Positives = 441/781 (56%), Gaps = 47/781 (6%)
Frame = +1
Query: 391 KEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPLLVKPGL 570
+EI+L+ + + F +++ C KE+IRKRLRAIN +R QK KAGQVYGVPLSG LL KP +
Sbjct: 101 REIALTQI-QAFSKPTVLKC-KEAIRKRLRAINESRAQKRKAGQVYGVPLSGSLLTKPCV 158
Query: 571 FPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLLRAT*FI 750
FPEQR EDF++ WIEGLSQ HK L SLA+ VPHG+RKK LF LI++NVPLLRAT FI
Sbjct: 159 FPEQRPCGEDFRKKWIEGLSQHHKRLRSLADHVPHGFRKKNLFEVLIRNNVPLLRATWFI 218
Query: 751 *ICM-------STAFLKKLVNPMQNNIIEINSQH-----RNI*EDLCSINALKVLKQPRG 894
+ S + + +Q + E+ ++ + + E+ S N + R
Sbjct: 219 KVTYLNQVRPASASISSGSPDKIQLSRTELWTKDVIDYLQGLLEEFFSRNNSHSTQHSRD 278
Query: 895 RSRHYMLNGII------------------------MQLLYWHFAEGLVHRATVIDWFLLQ 1002
+S+ + G I +++L WH AEGL+ + +IDW L Q
Sbjct: 279 KSQQILYAGSIQHKSDPVSGLDSEEPSLHFKWWYVVRILQWHHAEGLILPSLIIDWALRQ 338
Query: 1003 LQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNARE 1182
LQ++ L+ L++LLP++ ++T++LSQ++VRT V +++++ PS L DN+R
Sbjct: 339 LQDKELLEILQLLLPIIYGVIETVVLSQTYVRTLVGVAVRFIKE--PSPGGSDLVDNSRR 396
Query: 1183 AYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKGLSADLN 1362
AY E+LR I+ VPDT V+LDCFPLP CV ++ + D+ +
Sbjct: 397 AYTSSALVEMLRFLILAVPDTFVALDCFPLPPCVVSHVANDGSFLTKVSEDTIKIK---- 452
Query: 1363 ISKQESADSLVERKISDRD---ISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLD 1533
++ +++ K+ D +S + + SIQKRA NLAK+ PG +++ K VQ+LD
Sbjct: 453 -NRPAEVPTVLRDKVLDGQYPSLSFDHIVSSIQKRADNLAKAASPGYPCHSEAKAVQALD 511
Query: 1534 RALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYAVFFLCE 1713
+AL GDV+ AY +F++ G ++ + WI++++PC+RSSL+++ T+ S+ + +VFFLCE
Sbjct: 512 KALVDGDVRGAYKFLFDDHCDG-AVNEGWIAEVSPCLRSSLKWIGTVSSSLVCSVFFLCE 570
Query: 1714 WATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTS--KSDKESGNNIAH 1887
WAT FR+ R A P K TG++D S++YIA+ ++ +K++++Q K++ +G N
Sbjct: 571 WATCDFRDFRTAPPHDMKFTGRKDFSQVYIAIRLLKLKLRDVQNPGCCKNNSTAGINT-- 628
Query: 1888 PAISSDGLVTGREEKRDSNRLFSIIQIFPKEY----FDGNAVAS-EFVQSRGPIHDAIVL 2052
L G + +++ S++ + + D ++ S + QS GP+HD IV
Sbjct: 629 -------LAKGSSQPNNNSGRISVVNAYENKNNLKNMDRASIDSLDIFQSPGPLHDIIVC 681
Query: 2053 WLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANWHK 2232
W+D+HE+ G K+L++L++E RSGIF VY+RQLI+SG +D+ V+++R H
Sbjct: 682 WIDQHEAHKGEGFKRLQLLIMELARSGIFYPQVYVRQLIVSGIMDRYGPIVDLDRRKRHY 741
Query: 2233 LILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESKVKAN 2412
IL++LP ++ E ++ + S++I +YSNERR VL+ + K + + + +
Sbjct: 742 RILKQLPGSYMRDALEGAQVTEVGLLSDAILIYSNERRLVLQGLLWDQYKSKNIASISSR 801
Query: 2413 FSVN-SVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHIISNILHFPD 2589
+ VS D + + + GK + I ELK IS +L P+
Sbjct: 802 RPKHLPVSARDGASPASVDQWRTLQSASNMLSGKTAKSNAD---IEELKAAISGLLQLPN 858
Query: 2590 S 2592
S
Sbjct: 859 S 859
>gb|EOX95957.1| Mediator of RNA polymerase II transcription subunit 12 isoform 1
[Theobroma cacao]
Length = 2261
Score = 438 bits (1126), Expect = e-120
Identities = 294/785 (37%), Positives = 426/785 (54%), Gaps = 47/785 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
D L+ +KEISL+ V Q + K ++ +++IRK LRAIN +R QK KAGQVYGVPLSG L
Sbjct: 95 DGLEDSKEISLTQV--QAFTKPVVLKCRDAIRKCLRAINESRAQKRKAGQVYGVPLSGAL 152
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQR EDF++ WIEGLSQ HK L SLA+ VPHGYRKK L LI++NVPLL
Sbjct: 153 LSKPGVFPEQRPCNEDFRKKWIEGLSQQHKRLRSLADQVPHGYRKKTLIEVLIRNNVPLL 212
Query: 733 RAT*FI*ICM----------------------STAFLKKLVNPMQNNIIEI----NSQHR 834
RAT FI + + + K +++ +Q + E NS
Sbjct: 213 RATWFIKVTYLNQVHPGSAISSGAPDKAQLSRTELWTKDVIDYLQTLLDEFFPKSNSHST 272
Query: 835 NI*EDLCSINALKVLKQPRGRSRHYMLNG----------IIMQLLYWHFAEGLVHRATVI 984
D Q R S +L+G +++LL WH AEGLV + +I
Sbjct: 273 QHSRDRLPQMLYAGSLQHRIDSASTILDGGEPSLHFKWWYVVRLLQWHHAEGLVLPSLII 332
Query: 985 DWFLLQLQ----EESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*N 1152
DW L QLQ E+ + L++LLP++ ++TIIL Q++VR V I+++R PS
Sbjct: 333 DWLLNQLQVLNLEKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIRE--PSPG 390
Query: 1153 VPALKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYG 1332
L DN+R AY + E+LR I VPDT V+LDCFPLP CV + L G
Sbjct: 391 GSDLVDNSRRAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCVVS-------HALNDGG 443
Query: 1333 DSKGLSADLNISKQESADSLVER----KISDRDISIANTIVSIQKRASNLAKSVCPGILR 1500
S D K SAD+ V R + +S + + +IQKRA NLAK G
Sbjct: 444 FLSKSSDDAGKIKHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPS 503
Query: 1501 NNQGKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLES 1680
+ K VQ+LD+AL GD+ AY +FE + G ++ + W+++++PC+RSSL+++ T+
Sbjct: 504 QSVAKAVQTLDKALLQGDLMEAYKHIFENLCDG-AVREGWVAEVSPCLRSSLKWIQTVNL 562
Query: 1681 TEIYAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTS-KS 1857
+ I +VFFLCEWAT FR+ R A P K TG++D S++Y+A+ ++ +K++ELQ K+
Sbjct: 563 SLICSVFFLCEWATCDFRDFRTAPPRDLKFTGRKDFSQMYLAIQLLKLKIRELQNPEHKN 622
Query: 1858 DKESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDG-NAVASEFVQSRGPI 2034
+ SG N IS + R + + S +++ DG N+ +S+ S GP+
Sbjct: 623 GRASGVNSTAKNISQQNNYSRRNLSGNLFEVKSKVRVV-----DGRNSNSSDIFDSPGPL 677
Query: 2035 HDAIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIE 2214
HD IV W+D+HE G K+L++ +LE IRSGIF Y+RQLI+SG +D + +
Sbjct: 678 HDIIVCWIDQHEGHKGEGGKRLQLFVLELIRSGIFYPQAYVRQLIVSGIIDTNGPVSDFD 737
Query: 2215 RANWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREE 2394
R H IL++LP F+ EE ++ + E++ VYSNERR VL + +
Sbjct: 738 RRKRHHRILKQLPGQFMCDVLEEARIAVGSELLEAVNVYSNERRLVLHGLLSDQYSNANN 797
Query: 2395 SKVKA-NFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHIISN 2571
+ V A +S S + ++K + +K +R++ L ELK IS
Sbjct: 798 AHVSAKKQKYHSTSGRNGASQASGDQRK--------TVQSSKAFRREVDL-EELKASISV 848
Query: 2572 ILHFP 2586
+L FP
Sbjct: 849 LLQFP 853
>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Fragaria vesca subsp. vesca]
Length = 2261
Score = 432 bits (1111), Expect = e-118
Identities = 276/787 (35%), Positives = 428/787 (54%), Gaps = 43/787 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
D ++ ++EISLS V Q ++K L+ +E+I+KRLRAIN +R QK KAGQVYGVPL+ L
Sbjct: 95 DGIEESREISLSQV--QGFSKPLVFRCREAIKKRLRAINESRAQKRKAGQVYGVPLADSL 152
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQR ED ++ WIEGLSQ HK L SLA+ VPHGYRK++LF L ++NVPLL
Sbjct: 153 LTKPGVFPEQRPCGEDLRKKWIEGLSQQHKRLRSLADHVPHGYRKRSLFEVLTRNNVPLL 212
Query: 733 RAT*FI*ICM------STAFLKKLVNPMQNNIIEINSQH-----RNI*EDLCSINALKVL 879
RAT F+ + ++ + + + Q + E+ ++ + + ++ S N +
Sbjct: 213 RATWFVKVTYLNQIRPGSSSISGIPDKTQLSRTELWTKDVIEYLQYLLDEFFSRNNSLLS 272
Query: 880 KQPRGRSRHYMLNGIIMQ-------------------------LLYWHFAEGLVHRATVI 984
R RS+ + G + Q LL WH AEGL+ +I
Sbjct: 273 SHNRDRSQQMLYAGSVSQRSDPASSLLDGEEPSLHFKWWYVVRLLQWHHAEGLLLPTLII 332
Query: 985 DWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPAL 1164
+W L QLQE+ L+ +++LLP++ ++T++LSQ++VR V ++++R PS L
Sbjct: 333 EWVLRQLQEKELLEIVQLLLPIIYGVLETVVLSQTYVRNLVGTAVRFIRE--PSQGGSDL 390
Query: 1165 KDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKG 1344
DN+R AY V E+LR ++ VPD+ V+LDCFPLP CV + G
Sbjct: 391 VDNSRRAYTVSALVEMLRYLVLSVPDSFVALDCFPLPPCVVSYVANE--------GSLPK 442
Query: 1345 LSADLNISKQESAD--SLVERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQ 1509
LS D+ K SA+ S+ K D + ++ + + SIQKRA NL KS P ++
Sbjct: 443 LSDDVRKIKIGSAEVASVFRSKAFDAQFQSLAFDHVVSSIQKRADNLEKSTSPSYPNHSI 502
Query: 1510 GKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEI 1689
K VQ+LDR+L GDV AY +FE+ G M + W+++++P +R+SL+++ T+ + I
Sbjct: 503 AKAVQALDRSLVQGDVLGAYRFLFEDPCDG-IMNENWVAEVSPRLRTSLKWIGTVNLSFI 561
Query: 1690 YAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTS--KSDK 1863
+VFFLCEWAT FR+ R A P K TG++D S+++IA ++++K+++LQ + K+D
Sbjct: 562 CSVFFLCEWATCDFRDFRTAPPGKLKFTGRKDFSQVHIAARLLLLKIRDLQSSPQHKNDN 621
Query: 1864 ESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFVQSRGPIHDA 2043
+ + + E ++ + + + +S +S GP+HD
Sbjct: 622 PAKGSCQQNNFPVRSFMGSSYESKNKSSVHQ-----------RSVKSSNIFESPGPLHDV 670
Query: 2044 IVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERAN 2223
IV W+D+H+ G K+L+ L++E IRSGIF H Y+RQLI+SG +D +E +R
Sbjct: 671 IVCWIDQHDVGKGEGFKRLQFLVIELIRSGIFYPHAYVRQLIVSGIMDINGPVIESDRRK 730
Query: 2224 WHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESKV 2403
H +L+ LP F+ EE + P E++ YSNERR +L F K+ K
Sbjct: 731 RHYQVLKLLPGLFMHDALEEAGIAEGPKLLEAMCSYSNERRLILRGFLGDHNKNM-SMKS 789
Query: 2404 KANFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHIISNILHF 2583
N++ D + A + K ++P + GK+ + + + ELK IS +L
Sbjct: 790 ALKQENNAIPGKDGGLPVSADQWKTVELPSNILPGKSGKRGKSDADVEELKEAISLLLQL 849
Query: 2584 PDSLVVP 2604
P S P
Sbjct: 850 PYSSTPP 856
>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905096|ref|XP_006445036.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905098|ref|XP_006445037.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 12-like isoform X2 [Citrus sinensis]
gi|557547297|gb|ESR58275.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547298|gb|ESR58276.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547299|gb|ESR58277.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2277
Score = 425 bits (1092), Expect = e-116
Identities = 261/703 (37%), Positives = 404/703 (57%), Gaps = 52/703 (7%)
Frame = +1
Query: 403 LSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPLLVKPGLFPEQ 582
+SL Q +NK ++ +E+IRK LRAIN +R QK KAGQVYGVPLS LL KPG+FPEQ
Sbjct: 103 ISLTQAQTFNKPVVLKCREAIRKCLRAINESRAQKRKAGQVYGVPLSDSLLTKPGVFPEQ 162
Query: 583 RASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLLRAT*FI*ICM 762
R E+F++ WIEGLSQ HK L SLA+ VPHGYRK++LF LI++NVPLLRAT FI +
Sbjct: 163 RPCGEEFRKKWIEGLSQQHKRLRSLADHVPHGYRKRSLFEVLIRNNVPLLRATWFIKVTY 222
Query: 763 -------STAFLKKLVNPMQNNIIEINSQH-----RNI*EDLCSINALKVLKQPRGRSRH 906
S L + +Q + EI ++ +++ ++ S N + R RS
Sbjct: 223 LNQVRHGSANSLSGAQDKIQLSRTEIWTKDVIDYLQHLLDEFFSRNNSHSTQYSRDRSPQ 282
Query: 907 YMLNG------------------------IIMQLLYWHFAEGLVHRATVIDWFLLQLQEE 1014
+ G +++L+ WH AEGL+ + +I+W L QL+++
Sbjct: 283 TLYTGSPQQRSDPAAVINSEEPSLHFKWWYMVRLVQWHLAEGLLLPSYIIEWVLNQLKDK 342
Query: 1015 SSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAREAYNV 1194
L+ L+++LP++ ++T++ SQ++VR+ V ++R PS L DN+R AY +
Sbjct: 343 ELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIRE--PSPGGSDLVDNSRRAYTI 400
Query: 1195 IFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKGLSADLNISKQ 1374
+E+LR I+ VPDT V+LDCFPLP+CV ++ + SK S D+ K
Sbjct: 401 SALAEMLRYLILAVPDTFVALDCFPLPSCVVSYAANDGNFV------SKA-SEDVGKMKN 453
Query: 1375 ESADSLV--ERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 1539
S D++ K D + +S N I +IQ+RA NLAK PG ++ K VQ+LD+A
Sbjct: 454 YSTDAICVFRGKAVDAQYQSLSFDNVISAIQRRADNLAKDASPGYPGHSVAKAVQALDKA 513
Query: 1540 LALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYAVFFLCEWA 1719
L GD++ AY +FE++ ++ + WI++++PC+RSSL+++ T+ + + +VFF+CEWA
Sbjct: 514 LLQGDIREAYKHLFEDLCDA-ALDESWIAEVSPCLRSSLKWIGTVSLSSVCSVFFICEWA 572
Query: 1720 TYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSKSDKESG----NNIAH 1887
T FR+ R P G K TG++D S+IY+A+ ++ K+++L + ES +N+A
Sbjct: 573 TCDFRDFRTVPPHGMKFTGRKDFSQIYVAIRLLKQKIRDLHTPPRRKSESTLGIIDNLAK 632
Query: 1888 PAISSDGLV------TGREEKRDSNRLFSIIQIFPKEYFDGNAV-ASEFVQSRGPIHDAI 2046
+ + G E K ++NRL DG + +S+ ++ GP+HD I
Sbjct: 633 GSRQRNNYANRNFQGNGYEIKNNANRL------------DGLRINSSDIFETPGPLHDII 680
Query: 2047 VLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANW 2226
V W+D+HE R G+K+++ ++E +R+GIF Y+RQL++SG LD + +++ R
Sbjct: 681 VCWIDQHEIHKREGVKRVQHFIMELVRAGIFYPQAYVRQLMVSGILDM--NGLDLNRRRR 738
Query: 2227 HKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVL 2355
H IL+ LP F+ EE ++ SE+I VYSNERR VL
Sbjct: 739 HHRILKVLPGLFLRVALEEARIAEGSQLSEAIHVYSNERRLVL 781
>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905092|ref|XP_006445034.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905100|ref|XP_006445038.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
hypothetical protein CICLE_v10018441mg [Citrus
clementina] gi|557547296|gb|ESR58274.1| hypothetical
protein CICLE_v10018441mg [Citrus clementina]
gi|557547300|gb|ESR58278.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2239
Score = 425 bits (1092), Expect = e-116
Identities = 261/703 (37%), Positives = 404/703 (57%), Gaps = 52/703 (7%)
Frame = +1
Query: 403 LSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPLLVKPGLFPEQ 582
+SL Q +NK ++ +E+IRK LRAIN +R QK KAGQVYGVPLS LL KPG+FPEQ
Sbjct: 65 ISLTQAQTFNKPVVLKCREAIRKCLRAINESRAQKRKAGQVYGVPLSDSLLTKPGVFPEQ 124
Query: 583 RASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLLRAT*FI*ICM 762
R E+F++ WIEGLSQ HK L SLA+ VPHGYRK++LF LI++NVPLLRAT FI +
Sbjct: 125 RPCGEEFRKKWIEGLSQQHKRLRSLADHVPHGYRKRSLFEVLIRNNVPLLRATWFIKVTY 184
Query: 763 -------STAFLKKLVNPMQNNIIEINSQH-----RNI*EDLCSINALKVLKQPRGRSRH 906
S L + +Q + EI ++ +++ ++ S N + R RS
Sbjct: 185 LNQVRHGSANSLSGAQDKIQLSRTEIWTKDVIDYLQHLLDEFFSRNNSHSTQYSRDRSPQ 244
Query: 907 YMLNG------------------------IIMQLLYWHFAEGLVHRATVIDWFLLQLQEE 1014
+ G +++L+ WH AEGL+ + +I+W L QL+++
Sbjct: 245 TLYTGSPQQRSDPAAVINSEEPSLHFKWWYMVRLVQWHLAEGLLLPSYIIEWVLNQLKDK 304
Query: 1015 SSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAREAYNV 1194
L+ L+++LP++ ++T++ SQ++VR+ V ++R PS L DN+R AY +
Sbjct: 305 ELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIRE--PSPGGSDLVDNSRRAYTI 362
Query: 1195 IFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKGLSADLNISKQ 1374
+E+LR I+ VPDT V+LDCFPLP+CV ++ + SK S D+ K
Sbjct: 363 SALAEMLRYLILAVPDTFVALDCFPLPSCVVSYAANDGNFV------SKA-SEDVGKMKN 415
Query: 1375 ESADSLV--ERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 1539
S D++ K D + +S N I +IQ+RA NLAK PG ++ K VQ+LD+A
Sbjct: 416 YSTDAICVFRGKAVDAQYQSLSFDNVISAIQRRADNLAKDASPGYPGHSVAKAVQALDKA 475
Query: 1540 LALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYAVFFLCEWA 1719
L GD++ AY +FE++ ++ + WI++++PC+RSSL+++ T+ + + +VFF+CEWA
Sbjct: 476 LLQGDIREAYKHLFEDLCDA-ALDESWIAEVSPCLRSSLKWIGTVSLSSVCSVFFICEWA 534
Query: 1720 TYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSKSDKESG----NNIAH 1887
T FR+ R P G K TG++D S+IY+A+ ++ K+++L + ES +N+A
Sbjct: 535 TCDFRDFRTVPPHGMKFTGRKDFSQIYVAIRLLKQKIRDLHTPPRRKSESTLGIIDNLAK 594
Query: 1888 PAISSDGLV------TGREEKRDSNRLFSIIQIFPKEYFDGNAV-ASEFVQSRGPIHDAI 2046
+ + G E K ++NRL DG + +S+ ++ GP+HD I
Sbjct: 595 GSRQRNNYANRNFQGNGYEIKNNANRL------------DGLRINSSDIFETPGPLHDII 642
Query: 2047 VLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANW 2226
V W+D+HE R G+K+++ ++E +R+GIF Y+RQL++SG LD + +++ R
Sbjct: 643 VCWIDQHEIHKREGVKRVQHFIMELVRAGIFYPQAYVRQLMVSGILDM--NGLDLNRRRR 700
Query: 2227 HKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVL 2355
H IL+ LP F+ EE ++ SE+I VYSNERR VL
Sbjct: 701 HHRILKVLPGLFLRVALEEARIAEGSQLSEAIHVYSNERRLVL 743
>gb|EXC06808.1| Putative mediator of RNA polymerase II transcription subunit 12
[Morus notabilis]
Length = 2274
Score = 424 bits (1089), Expect = e-115
Identities = 259/696 (37%), Positives = 395/696 (56%), Gaps = 45/696 (6%)
Frame = +1
Query: 403 LSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPLLVKPGLFPEQ 582
+SL ++K ++ KE+IRK LRAIN +R QK KAGQVYGVPL+ LL KPG+FPEQ
Sbjct: 103 ISLTQAPTFSKPVVFKCKEAIRKCLRAINESRAQKRKAGQVYGVPLADSLLTKPGVFPEQ 162
Query: 583 RASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLLRAT*FI*ICM 762
R EDF++ WIEGLSQ HK L SL + VPHGYRK++LF +I++NVPLLRAT FI
Sbjct: 163 RPCGEDFRKKWIEGLSQQHKRLRSLVDHVPHGYRKRSLFEVIIRNNVPLLRATWFI---- 218
Query: 763 STAFLKKLVNPMQNNIIEINSQH-----------------RNI*EDLCSINALKVLKQPR 891
+L + V P NI S +++ ++ + N R
Sbjct: 219 KVTYLNQ-VRPGSVNISSGTSDKAQLSRTELWTKDVIDYLQHLLDEFFAKNHSHSTSHSR 277
Query: 892 GRSRHYMLNGII-------------------------MQLLYWHFAEGLVHRATVIDWFL 996
RS ++ G + M+LL WH+A+GL+ + +IDW L
Sbjct: 278 DRSTQFLYAGSVHQRSDPVSAGLDIEDSSLHFKWWYMMRLLQWHYADGLILPSLIIDWVL 337
Query: 997 LQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNA 1176
QLQ++ SL+ +++LLP++ ++T++LSQ++VR+ V ++++R PS L DN+
Sbjct: 338 RQLQDKESLEIVQLLLPIIYGVLETVVLSQTYVRSLVGIAVRFIRE--PSPGGSDLVDNS 395
Query: 1177 REAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCM-LPPDNCLYPLTFYGDSKGLSA 1353
R+AY E+LR I+ VPDT V+LDCFPLP+CV + D L +F K
Sbjct: 396 RKAYTTSALVEMLRYLIVAVPDTFVALDCFPLPSCVVSHVVADGSLSKSSFEDVRKIKIG 455
Query: 1354 DLNISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLD 1533
IS + L + S +++ + SIQKRA +LAK+ PG ++ KVV++LD
Sbjct: 456 SSEISVPFRSKGLDAQYQS---LALDYVVSSIQKRADSLAKAARPGYPGHSVAKVVEALD 512
Query: 1534 RALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYAVFFLCE 1713
R+ LGDV+ AY +FE++ G ++ + WI++++PC+RSSL+++ T+ + + +VF LCE
Sbjct: 513 RSRVLGDVRGAYTFLFEDLCEG-AVNEHWIAEVSPCLRSSLKWIGTVSLSLVCSVFLLCE 571
Query: 1714 WATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTS--KSDKESGNNIAH 1887
WAT FR+ R A P K TG++D S++YIA+ ++ +K + LQ + KSD G
Sbjct: 572 WATCDFRDFRTAPPDKLKFTGRKDFSQVYIAIRILKLKAEGLQSSCRCKSDNSLGVKTIT 631
Query: 1888 PAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFVQSRGPIHDAIVLWLDRH 2067
+ S R D L S I+ ++ + + +S G +HD +V W+D+H
Sbjct: 632 KSSSQQNSFLARTSMGDLYDLKSNIRNVDQQSMKTSCI----FESPGALHDIVVCWIDQH 687
Query: 2068 ESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANWHKLILRR 2247
E+ G ++L++L++E IR+GIF Y+RQL++SG ++ S+V+ +R H ILR+
Sbjct: 688 EACKGDGFQRLQLLIVELIRAGIFYPQAYVRQLMVSGIMEMNGSTVDADRRKRHYRILRQ 747
Query: 2248 LPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVL 2355
LP FV +E P E++ VY+NERR VL
Sbjct: 748 LPEFFVRDALQEAGFAEGPQLLEAMHVYANERRLVL 783
>ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [Amborella trichopoda]
gi|548832222|gb|ERM95018.1| hypothetical protein
AMTR_s00009p00238900 [Amborella trichopoda]
Length = 2276
Score = 423 bits (1087), Expect = e-115
Identities = 272/748 (36%), Positives = 420/748 (56%), Gaps = 66/748 (8%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
D ++ +EI+L+ + +K +I KE+IRKRLRAIN +R QK KAGQVYGVPLSGPL
Sbjct: 94 DGIEEAREITLTQI--GTLSKPVIVRCKEAIRKRLRAINESRAQKRKAGQVYGVPLSGPL 151
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L+K G+FPEQR S EDF++ WIEGLSQ HK L SLA+ VPHGYRK++LF LI+HNVPLL
Sbjct: 152 LIKSGVFPEQRPSGEDFRKKWIEGLSQQHKRLRSLADHVPHGYRKRSLFEVLIRHNVPLL 211
Query: 733 RAT*FI*I-------------------CMSTAFLKKLVNPMQNNIIEI----------NS 825
RAT FI + + + K +++ +Q+ + E +S
Sbjct: 212 RATWFIKVNYLNQVRPVPSGGPDKTQSNRTELWTKDVIDYLQHLLDEFLHNEGSHSVPHS 271
Query: 826 QHRNI*EDLC---------SINALKVLKQPRGRSRHYMLNGIIMQLLYWHFAEGLVHRAT 978
+ + L SI + ++P + + + + II WH+AEGL+ +
Sbjct: 272 RDHSPQTQLLGTGQHHGGDSIQVISDGEEPALQFKWWYMVQIIQ----WHYAEGLLLPSQ 327
Query: 979 VIDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVP 1158
+I+W L QLQE SL+ L++LLP++ +++I L QS+VR VD ++ L L + P
Sbjct: 328 IIEWVLSQLQENESLEVLKLLLPIVYNLIESIALCQSYVRMLVDISLRSLEELATWVSNP 387
Query: 1159 ALKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDS 1338
DN+ +Y +E+L+ I+ VPDT V+LD FPLP+CV + DS
Sbjct: 388 V--DNSLRSYVASSLAELLQYLILNVPDTFVALDSFPLPSCV--------------FPDS 431
Query: 1339 KGLSADLNIS------KQESADSLVE-----RKISDRDISIANTIVSIQKRASNLAKSVC 1485
K SA + IS + SA++ + R +S R ++ + + +IQ RA++L K+V
Sbjct: 432 KNASALVTISPDVRKGQSGSAENFNKGTKKGRFVSGRQVAFRHVVSAIQIRAAHLTKAVS 491
Query: 1486 PGILRNNQGKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFM 1665
PG+ + + K+VQSLD+ L LGDV+ A++ VFE+V ++ + WIS+++P ++S L+++
Sbjct: 492 PGLQGHLEAKLVQSLDKTLILGDVRGAHNSVFEDVCDADA-AEGWISEVSPNLQSCLKWI 550
Query: 1666 NTLESTEIYAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKEL-- 1839
+ + IY+VFFLCEWAT FR+ KVTG++DIS++Y+AVS++ +K +E+
Sbjct: 551 GIVSQSLIYSVFFLCEWATCDFRDFHTPPSSDVKVTGRKDISQVYMAVSLLKLKKEEICI 610
Query: 1840 ---------------QKTSKSDKESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFP 1974
K S DK GN A+ + ++ G K
Sbjct: 611 SLLNKDRSSPGASVPGKGSLLDKPLGN----AALENPSMIKGSSRKS------------- 653
Query: 1975 KEYFDGNAVASEFVQSRGPIHDAIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVY 2154
G+ +S+ QS GP+H+ +V WLD+H++ G K+L+VL++E IR GIF Y
Sbjct: 654 ----YGSTDSSDIFQSPGPLHEIVVSWLDQHDTGKGEGFKRLQVLIIELIRCGIFYPQAY 709
Query: 2155 LRQLIISGTLDKRESSVEIERANWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYS 2334
+RQLI+SG +DK ++ +++R H IL++LP +F E ++ + E++ YS
Sbjct: 710 VRQLIVSGIMDKVDTPADVDRRKRHIRILKQLPGHHLFDALEGTRVAEVLVSPEAVHQYS 769
Query: 2335 NERRFVLESFQKRKGKDREESKVKANFS 2418
NERR VL+ F R E+ +NF+
Sbjct: 770 NERRLVLQGFMSH---SRNENDGSSNFA 794
>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cucumis sativus]
Length = 2254
Score = 422 bits (1084), Expect = e-115
Identities = 287/802 (35%), Positives = 422/802 (52%), Gaps = 46/802 (5%)
Frame = +1
Query: 337 NITG*LTQSKF---TDDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQK 507
N+T QS + + L+ ++EI L+ V Q ++K L+ K++ RKRLRAIN++R QK
Sbjct: 80 NLTREYVQSGYRETVEGLEESREILLTQV--QAFSKHLVIKCKDATRKRLRAINDSRAQK 137
Query: 508 CKAGQVYGVPLSGPLLVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRK 687
KAGQVYGVPLS LL KPG+FPEQR EDF++ WIEGLSQ HK L SLA+ VPHGYRK
Sbjct: 138 RKAGQVYGVPLSVSLLTKPGIFPEQRPCGEDFRKKWIEGLSQQHKRLRSLADNVPHGYRK 197
Query: 688 KALFAALIKHNVPLLRAT*FI*I----------------------CMSTAFLKKLVNPMQ 801
+ALF LI++NVPLLRAT FI I T F K V
Sbjct: 198 RALFEVLIRNNVPLLRATWFIKINYLNQVRPNSASISCGAFDKAQLSRTEFWTKDVVDYL 257
Query: 802 NNIIE---------INSQHRNI*EDLCSINALKVLKQP------RGRSRHYMLNGIIMQL 936
++E + +++ + S+ P S H+ ++ L
Sbjct: 258 ECLVEEFFSKSNSHLTPPNKDRSPQMFSVGFTHTKGDPPAVFDGEEPSLHFKWWYVVRLL 317
Query: 937 LYWHFAEGLVHRATVIDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAI 1116
L WH AEGL+ + ++DW L QL+E L+ LE+LLP++ +DTI+LSQ++VRT V
Sbjct: 318 L-WHQAEGLLLPSLIVDWVLGQLEENDVLEILELLLPIIYGVLDTIVLSQTYVRTLVRIS 376
Query: 1117 IQWLRLLFPS*NVPALKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLP 1296
I+++R FP + L DN+R Y E+LR ++ VPDT V+LDCFP P CV
Sbjct: 377 IRFIRDSFPGGS--DLVDNSRRVYTTSALVEMLRYLVLAVPDTFVALDCFPFPRCVV--- 431
Query: 1297 PDNCLYPLTFYGDSKGLSADLNISKQESADSLVERKISDRDISIA--NTIVSIQKRASNL 1470
+ + F L + E A + I + S A N + SI+K A NL
Sbjct: 432 -SHTVNDGNFGSKVPEDVTKLRYTSAEVASPFRSKSIDFQYQSSAFDNVVSSIRKCADNL 490
Query: 1471 AKSVCPGILRNNQGKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRS 1650
AK+V P + K V +LD++L GD+ AY +FE+ G S+ + W +++PC+R
Sbjct: 491 AKAVNPKFPVCSVAKAVHALDKSLLHGDIGVAYKYLFEDCCNG-SINEGWFEEVSPCLRM 549
Query: 1651 SLRFMNTLESTEIYAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKM 1830
SL+++ T+ +VFFLCEWAT +R+ A P K TG +D S++YIA ++ MK
Sbjct: 550 SLKWIQTVNVAFACSVFFLCEWATCEYRDFWSAAPRELKFTGGKDFSQVYIATRLLKMKA 609
Query: 1831 KELQKTS--KSDKESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFD--GNA 1998
++LQ S K + SG N + + L ++ LF PK G
Sbjct: 610 RDLQSVSGIKFETSSGLNSTKGSSHQNSLF----GRKPVGNLFE-----PKSRLKKLGGN 660
Query: 1999 VASEFVQSRGPIHDAIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISG 2178
+ + +S GP+HD +V W+D+HE + G K++++L++E +R+GIF H Y+RQLI+SG
Sbjct: 661 GSLDLFESPGPLHDILVCWIDQHEVQKGEGFKRIQLLIVELVRAGIFYPHSYVRQLIVSG 720
Query: 2179 TLDKRESSVEIERANWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLE 2358
+D +V+ ++ H+ IL LP FV T ++ K+ E I VYS ERR VL
Sbjct: 721 IMDTNGPAVDSDKRRRHQQILMHLPGSFVRATLDDGKIAQGAQLVEVINVYSKERRLVLH 780
Query: 2359 SFQKRKGKDREESKVKANFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQ 2538
+ D + + +N + D V + ++ IP G K+ K ++
Sbjct: 781 GLVYEQLSDISSANISSN-RKRKIPTSDKVSSSVTSVNQLKSIPPFSNTGSTKRLKSEVD 839
Query: 2539 LINELKHIISNILHFPDSLVVP 2604
I LK IS +L FP+S +P
Sbjct: 840 -IEALKEAISLLLRFPNSSSLP 860
>ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cucumis sativus]
Length = 2254
Score = 422 bits (1084), Expect = e-115
Identities = 287/802 (35%), Positives = 422/802 (52%), Gaps = 46/802 (5%)
Frame = +1
Query: 337 NITG*LTQSKF---TDDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQK 507
N+T QS + + L+ ++EI L+ V Q ++K L+ K++ RKRLRAIN++R QK
Sbjct: 80 NLTREYVQSGYRETVEGLEESREILLTQV--QAFSKHLVIKCKDATRKRLRAINDSRAQK 137
Query: 508 CKAGQVYGVPLSGPLLVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRK 687
KAGQVYGVPLS LL KPG+FPEQR EDF++ WIEGLSQ HK L SLA+ VPHGYRK
Sbjct: 138 RKAGQVYGVPLSVSLLTKPGIFPEQRPCGEDFRKKWIEGLSQQHKRLRSLADNVPHGYRK 197
Query: 688 KALFAALIKHNVPLLRAT*FI*I----------------------CMSTAFLKKLVNPMQ 801
+ALF LI++NVPLLRAT FI I T F K V
Sbjct: 198 RALFEVLIRNNVPLLRATWFIKINYLNQVRPNSASISCGAFDKAQLSRTEFWTKDVVDYL 257
Query: 802 NNIIE---------INSQHRNI*EDLCSINALKVLKQP------RGRSRHYMLNGIIMQL 936
++E + +++ + S+ P S H+ ++ L
Sbjct: 258 ECLVEEFFSKSNSHLTPPNKDRSPQMFSVGFTHTKGDPPAVFDGEEPSLHFKWWYVVRLL 317
Query: 937 LYWHFAEGLVHRATVIDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAI 1116
L WH AEGL+ + ++DW L QL+E L+ LE+LLP++ +DTI+LSQ++VRT V
Sbjct: 318 L-WHQAEGLLLPSLIVDWVLGQLEENDVLEILELLLPIIYGVLDTIVLSQTYVRTLVRIS 376
Query: 1117 IQWLRLLFPS*NVPALKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLP 1296
I+++R FP + L DN+R Y E+LR ++ VPDT V+LDCFP P CV
Sbjct: 377 IRFIRDSFPGGS--DLVDNSRRVYTTSALVEMLRYLVLAVPDTFVALDCFPFPRCVV--- 431
Query: 1297 PDNCLYPLTFYGDSKGLSADLNISKQESADSLVERKISDRDISIA--NTIVSIQKRASNL 1470
+ + F L + E A + I + S A N + SI+K A NL
Sbjct: 432 -SHTVNDGNFGSKVPEDVTKLRYTSAEVASPFRSKSIDFQYQSSAFDNVVSSIRKCADNL 490
Query: 1471 AKSVCPGILRNNQGKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRS 1650
AK+V P + K V +LD++L GD+ AY +FE+ G S+ + W +++PC+R
Sbjct: 491 AKAVNPKFPVCSVAKAVHALDKSLLHGDIGVAYKYLFEDCCNG-SINEGWFEEVSPCLRM 549
Query: 1651 SLRFMNTLESTEIYAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKM 1830
SL+++ T+ +VFFLCEWAT +R+ A P K TG +D S++YIA ++ MK
Sbjct: 550 SLKWIQTVNVAFACSVFFLCEWATCEYRDFWSAAPRELKFTGGKDFSQVYIATRLLKMKA 609
Query: 1831 KELQKTS--KSDKESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFD--GNA 1998
++LQ S K + SG N + + L ++ LF PK G
Sbjct: 610 RDLQSVSGIKFETSSGLNSTKGSSHQNSLF----GRKPVGNLFE-----PKSRLKKLGGN 660
Query: 1999 VASEFVQSRGPIHDAIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISG 2178
+ + +S GP+HD +V W+D+HE + G K++++L++E +R+GIF H Y+RQLI+SG
Sbjct: 661 GSLDLFESPGPLHDILVCWIDQHEVQKGEGFKRIQLLIVELVRAGIFYPHSYVRQLIVSG 720
Query: 2179 TLDKRESSVEIERANWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLE 2358
+D +V+ ++ H+ IL LP FV T ++ K+ E I VYS ERR VL
Sbjct: 721 IMDTNGPAVDSDKRRRHQQILMHLPGSFVRATLDDGKIAQGAQLVEVINVYSKERRLVLH 780
Query: 2359 SFQKRKGKDREESKVKANFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQ 2538
+ D + + +N + D V + ++ IP G K+ K ++
Sbjct: 781 GLVYEQLSDISSANISSN-RKRKIPTSDKVSSSVTSVNQLKSIPPFSNTGSTKRLKSEVD 839
Query: 2539 LINELKHIISNILHFPDSLVVP 2604
I LK IS +L FP+S +P
Sbjct: 840 -IEALKEAISLLLRFPNSSSLP 860
>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Solanum lycopersicum]
Length = 2262
Score = 419 bits (1078), Expect = e-114
Identities = 283/797 (35%), Positives = 423/797 (53%), Gaps = 63/797 (7%)
Frame = +1
Query: 391 KEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPLLVKPGL 570
KEISL+ L F + C KE+IRK RAIN +R QK KAGQVYGVPL G L KPG+
Sbjct: 98 KEISLTQ-LPAFTKPVIFKC-KEAIRKCHRAINESRAQKRKAGQVYGVPLEGLQLTKPGI 155
Query: 571 FPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLLRAT*FI 750
FP+QR+S E+F++ WIEGLSQ HK L SLA+ VPHGYR+K+LF L+++NVPLLRAT F+
Sbjct: 156 FPDQRSSGEEFRKKWIEGLSQQHKRLKSLADHVPHGYRRKSLFEVLVRNNVPLLRATWFV 215
Query: 751 *ICMSTAFLKKLVNPMQNNII-----------------EINSQHRNI*EDLCSINALKVL 879
+L + V P ++I ++ + + ++ S N++
Sbjct: 216 ----KVTYLNQ-VRPGSSSISSGVPDKTHISRSEQWTKDVIDYLQYLLDEFISRNSVHSA 270
Query: 880 KQPRGRSRHYMLNGII-------------------------MQLLYWHFAEGLVHRATVI 984
Q R RS+ + G I +++L WH EGL+ + VI
Sbjct: 271 LQIRDRSQQMVYAGSIPLKSDPTLGSVDCEEPSLHFKWWYVVRILQWHHREGLLIPSLVI 330
Query: 985 DWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPAL 1164
DW L QLQE+ L L++LLPV+ F+DT++LSQS VRT V +++++ PS L
Sbjct: 331 DWVLNQLQEKELLGVLQLLLPVVYGFIDTVVLSQSCVRTLVGIALRFIQE--PSPGGSDL 388
Query: 1165 KDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCM-LPPDNCLYPLTFYGDSK 1341
DN+R AY + E+LR ++ VPDT V+LDCFP+P CV + D LY K
Sbjct: 389 VDNSRRAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSLYSKVTEDTRK 448
Query: 1342 GLSADLNISKQESADSLVER--KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGK 1515
+ + A L ++ +I SI+ + SIQKRA +LA + PG + K
Sbjct: 449 VKNGPFEV-----AYFLRDKGPEIRSDSYSISRAVSSIQKRAQHLATAARPGHPGQSVVK 503
Query: 1516 VVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYA 1695
+ +LD+ALA GD++ AY +FE V S+ D W ++++ C+RSSL+++ + + I +
Sbjct: 504 ALHALDKALAHGDLREAYKFLFENVHES-SIDDCWFAEVSSCLRSSLKYIRGVTLSSICS 562
Query: 1696 VFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKE-----------LQ 1842
VF++CEWAT FR+ R A P G K TG++D S IY+AV ++ +KM+E +
Sbjct: 563 VFYICEWATCDFRDFRFAPPRGMKFTGRKDFSAIYVAVRLLKLKMRETGISSRPRDPKIV 622
Query: 1843 KTSKSDKESGN--NIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFV 2016
K + K+ G N A ++S + +R + + +F
Sbjct: 623 KNNHLRKDPGQLTNYAGRTLASGASESLSNSRRAREKCNDFLGMF--------------- 667
Query: 2017 QSRGPIHDAIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRE 2196
S P+HD IV W+D+HE +N G K++++L++E IR+GIF Y+RQLI+SG +D E
Sbjct: 668 DSPSPLHDTIVCWIDQHEVQNTEGFKRVQLLIIELIRAGIFYPQAYVRQLIVSGIMDGDE 727
Query: 2197 SSVEIERANWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVL----ESF 2364
+ + H IL+ LP P+V EE ++ P+ SE + VY NER+ VL +S+
Sbjct: 728 PLSDPVKQKRHCKILKHLPGPYVHDALEEARIADTPVLSEVVNVYCNERKLVLHGMIDSY 787
Query: 2365 QKRKGKDREESKVKANFSVN-SVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQL 2541
G + K + N N S D + + ++G +K R ++L
Sbjct: 788 NSGCGSSHHKHKPRPNSGENLSAPSIDQLSSSESG-----------PFMSSKNVGRDVEL 836
Query: 2542 INELKHIISNILHFPDS 2592
ELK I+ +L FP S
Sbjct: 837 -EELKRSITALLQFPSS 852
>ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Glycine max]
gi|571443813|ref|XP_006576322.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Glycine max]
Length = 2227
Score = 416 bits (1070), Expect = e-113
Identities = 272/778 (34%), Positives = 413/778 (53%), Gaps = 39/778 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
+ L+ +EISL+ V +NK+++ KE+IRKRLRAIN +R QK KAGQVYGV LSG
Sbjct: 95 EGLEEAREISLTQV--PHFNKNIVLKCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQ 152
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L + G+FPE R EDF++ WIEGLSQ HK L SLA+ VPHGY++ +L LIK+NVPLL
Sbjct: 153 LGRSGIFPELRPCGEDFQKKWIEGLSQQHKRLRSLADHVPHGYKRASLLEVLIKNNVPLL 212
Query: 733 RAT*FI*ICM-----------------------STAFLKKLVNPMQNNIIEINSQH---- 831
RAT FI + S + K ++N +Q + E S++
Sbjct: 213 RATWFIKVTYLNQVRPGSVGISSGAADKIQLSRSDVWTKDVINYLQTLVDEFLSKNALHS 272
Query: 832 ----RNI*EDLCSINALKVLKQP-------RGRSRHYMLNGIIMQLLYWHFAEGLVHRAT 978
R + +L+ P G S H+ I++LL WH AEGL+H +
Sbjct: 273 ASHGRERSPQIPYTGSLQNKNDPLLSVSDGEGPSLHFRW-WYIVRLLQWHHAEGLLHSSL 331
Query: 979 VIDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVP 1158
VIDW QLQE+ L+ ++LLP++ F++TI+LSQS+VRT ++ +R P+
Sbjct: 332 VIDWVFNQLQEKELLEVWQLLLPIIYGFLETIVLSQSYVRTLAGLALRVIR--DPAPGGS 389
Query: 1159 ALKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDS 1338
L DN+R AY E+LR I+VVPDT +LDCFPLP+ V
Sbjct: 390 DLVDNSRRAYTAYAVVEMLRYLILVVPDTFAALDCFPLPSSV------------------ 431
Query: 1339 KGLSADLNISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKV 1518
+S +N + KI + + I IQK +LAKS PG + KV
Sbjct: 432 --ISHTMNDGSFVLKSTEAAGKIKNSSDDFGHIISCIQKHTEDLAKSASPGYPGHCLAKV 489
Query: 1519 VQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYAV 1698
++LD++L LGD++ AY +FEE+ G ++ + W+S ++PC+R SL++ T+ + IY+V
Sbjct: 490 AKALDKSLVLGDLRVAYKFLFEEL-CGGTVSEGWVSKVSPCLRLSLKWFGTVNTALIYSV 548
Query: 1699 FFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSKSDKESGNN 1878
FFLCEWAT FR+ R P K TG++D+S+++IAV +++MK+++++ + K E+ +
Sbjct: 549 FFLCEWATCDFRDFRSTPPRDIKFTGRKDLSQVHIAVRLLLMKIRDVKISQKQTNEN-HR 607
Query: 1879 IAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFVQSRGPIHDAIVLWL 2058
+H A +S ++ + + ++ S +S GP+HD IV W+
Sbjct: 608 ASHLAKNSSQCQN-----------WNYVGNVSRSKSSSKSMGSSVFESPGPLHDIIVCWI 656
Query: 2059 DRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANWHKLI 2238
D+H G K+L + ++E IR+GIF Y+RQLI+SG +D + V++ER H I
Sbjct: 657 DQHVVHKGEGPKRLHLFMVELIRAGIFYPLAYVRQLIVSGIMDVYVNVVDLERWRRHYRI 716
Query: 2239 LRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESKVKA-NF 2415
L++LP F+ EE + P E++++Y NERR +L D S + A
Sbjct: 717 LKQLPGCFIHDVLEESGIVEGPQLKEALQIYLNERRLILRGPLSMSHDDANGSNLSALKK 776
Query: 2416 SVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHIISNILHFPD 2589
S D+V A+ ++ + K K+ I EL+ IS +L P+
Sbjct: 777 KKYPASTKDEVSAVPIDQRNVISTTISSKSAKDNAN------IEELRTAISVLLQLPN 828
>ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Solanum tuberosum]
gi|565344967|ref|XP_006339571.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Solanum tuberosum]
Length = 2262
Score = 411 bits (1057), Expect = e-112
Identities = 281/797 (35%), Positives = 418/797 (52%), Gaps = 63/797 (7%)
Frame = +1
Query: 391 KEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPLLVKPGL 570
KEISL+ L F + C KE+IRK RAIN +R QK KAGQVYGVPL G L K G+
Sbjct: 98 KEISLTQ-LPAFTKPVIFKC-KEAIRKCHRAINESRAQKRKAGQVYGVPLEGLQLTKSGI 155
Query: 571 FPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLLRAT*FI 750
FP+QR+ E+F++ WIEGLSQ HK L SLA+ VPHGYR+K+LF L+K+NVPLLRAT F+
Sbjct: 156 FPDQRSCGEEFRKKWIEGLSQQHKRLKSLADHVPHGYRRKSLFEVLVKNNVPLLRATWFV 215
Query: 751 *ICMSTAFLKKLVNPMQNNII-----------------EINSQHRNI*EDLCSINALKVL 879
+L + V P ++I ++ + + ++ S N++
Sbjct: 216 ----KVTYLNQ-VRPGSSSISSGVPDKTHISRSEQWTKDVIDYLQYLLDEFISRNSVHSA 270
Query: 880 KQPRGRSRHYMLNGII-------------------------MQLLYWHFAEGLVHRATVI 984
Q R RS+ + G I +++L WH EGL+ + VI
Sbjct: 271 LQIRDRSQQMVYAGSIPLKSDPTLGSIDCEEPSLHFKWWYVVRILQWHHREGLLIPSLVI 330
Query: 985 DWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPAL 1164
DW L QLQE+ L L++LLPV+ F+DT++LSQS V T V I++++ PS L
Sbjct: 331 DWVLNQLQEKELLGVLQLLLPVIYGFIDTVVLSQSCVHTLVGIAIRFIQE--PSPGGSDL 388
Query: 1165 KDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCM-LPPDNCLYPLTFYGDSK 1341
DN+R AY + E+LR ++ VPDT V+LDCFP+P CV + D LY K
Sbjct: 389 VDNSRRAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSLYSKVTEDTRK 448
Query: 1342 GLSADLNISKQESADSLVER--KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGK 1515
+ + A L ++ ++ SI+ + SIQKRA +LA + PG + K
Sbjct: 449 VKNGPFEV-----AYFLRDKGPEVRSDSYSISRAVSSIQKRAQHLATAARPGHPGQSVVK 503
Query: 1516 VVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYA 1695
+ +LD+ALA GD++ AY +FE V S+ D W ++++ C+RSSL+++ + + I +
Sbjct: 504 ALHALDKALAHGDLREAYKFLFENV-RESSIDDCWFAEVSSCLRSSLKYIRGVTLSSICS 562
Query: 1696 VFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKE-----------LQ 1842
VFF+CEWAT FR+ R A P G K TG++D S IY+AV ++ KM+E +
Sbjct: 563 VFFICEWATCDFRDFRFAPPRGMKFTGRKDFSAIYVAVRLLKQKMRESGISSRPRDLKIV 622
Query: 1843 KTSKSDKESG--NNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFV 2016
K + K+ G N A ++S + +R + + +F
Sbjct: 623 KNNHLRKDPGQLTNYAGRTLASGASESLCNSRRAREKCSDFLGMF--------------- 667
Query: 2017 QSRGPIHDAIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRE 2196
S P+HD IV W+D+HE +N G K++++L++E IR+GIF Y+RQLI+SG +D
Sbjct: 668 DSPSPLHDTIVCWIDQHEVQNTEGFKRIQLLIIELIRAGIFYPQAYVRQLIVSGIMDGDG 727
Query: 2197 SSVEIERANWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVL----ESF 2364
+ + H IL+ LP P+V EE ++ P+ SE + VY NER+ VL +S+
Sbjct: 728 PLSDPVKQKRHCKILKHLPGPYVHDALEEARIADTPVLSEVVNVYCNERKLVLHGMIDSY 787
Query: 2365 QKRKGKDREESKVKANFSVN-SVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQL 2541
G + K + N N S D + + ++G +K R ++L
Sbjct: 788 NSACGSSYHKRKPRPNSGENLSAPSIDQLSSSESG-----------PFMSSKNVGRDVEL 836
Query: 2542 INELKHIISNILHFPDS 2592
ELK I+ +L FP S
Sbjct: 837 -EELKRSITALLQFPSS 852
>gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
Length = 2210
Score = 410 bits (1053), Expect = e-111
Identities = 259/725 (35%), Positives = 390/725 (53%), Gaps = 54/725 (7%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
+ ++ ++EISLS Q +NK L+ KE+I+KR RAIN +R QK KAGQVYG PL+ L
Sbjct: 95 EGIEESREISLSQA--QVFNKPLVFRCKEAIKKRFRAINESRAQKRKAGQVYGAPLADTL 152
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQR ED ++ WIEGLSQ HK L SLA+ VPHGYRK+ LF L ++NVPLL
Sbjct: 153 LSKPGVFPEQRHCGEDLRKKWIEGLSQQHKRLRSLADHVPHGYRKRPLFEVLTRNNVPLL 212
Query: 733 RAT*FI*------------ICMSTAFLKKLVNPMQNNIIEINSQHRNI*EDLCSINALKV 876
RAT FI I S A K ++ + ++ + + ++L S N
Sbjct: 213 RATWFIKVTYLNQVRPGSAIISSGAPDKAQLSRTELWTKDVIDYLQYLLDELFSRNNSHS 272
Query: 877 LKQPRGRSRHYMLNGIIMQ-------------------------LLYWHFAEGLVHRATV 981
R RS + G + Q LL WH AEGL+ +
Sbjct: 273 TSHNRDRSPQTLYAGSVPQRSDPASAVPDGEEPSLHFKWWYVVRLLQWHHAEGLLLPTLI 332
Query: 982 IDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPA 1161
I+W L QLQE+ L+ +++LLP++ ++T++LSQ++VR V ++++R PS
Sbjct: 333 IEWVLSQLQEKELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIRE--PSQGGSD 390
Query: 1162 LKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTF----Y 1329
+ N+R AY V E+LR I+ VPDT V+LDCFPLP+CV ++ L ++
Sbjct: 391 VVGNSRRAYTVSTVVEMLRYLILAVPDTFVALDCFPLPSCVVSYIVNDGLPKMSEDVRKI 450
Query: 1330 GDSKGLSADLNISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQ 1509
G+ A SK A + ++ + + SIQKRA NLAK+ P ++
Sbjct: 451 GNGPAEVASAFRSKGFDAQY--------QSLAFDHVVSSIQKRADNLAKAASPSYPFHSI 502
Query: 1510 GKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEI 1689
K VQ+LDR+L GDV+ AY +FE+ G + + WI+ ++PC+R+SL+++ T + +
Sbjct: 503 AKAVQALDRSLVQGDVRGAYRFLFEDPCDGVAN-ESWITGVSPCLRTSLKWIGTANLSFV 561
Query: 1690 YAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSKSDKES 1869
+VFFLCEWAT FR+ R A P K TG++D S++++ + ++ +K+++LQ + + +S
Sbjct: 562 CSVFFLCEWATCDFRDFRTAPPCELKFTGRKDFSQVHVVIQLLKLKIRDLQCSPQRKNDS 621
Query: 1870 -------------GNNIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASE 2010
NN + T K R IF
Sbjct: 622 FLGVGSVAKGSTQHNNFPVRISMGNSYETKNRSKNGDQRSIKSSNIF------------- 668
Query: 2011 FVQSRGPIHDAIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDK 2190
+S GP+HD IV W+D+HE+ G K+L++L++E IRSGIF+ H Y+RQLI+SG +D
Sbjct: 669 --ESPGPLHDIIVCWIDQHEAGKGEGFKRLQLLVIELIRSGIFHPHAYVRQLIVSGIMDT 726
Query: 2191 RESSVEIERANWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQK 2370
VE++R H IL+ LP + +E + +P SE++ +YS ERR +L
Sbjct: 727 DGPVVEVDRRKRHYQILKLLPGLLMRHALKEAGIAEEPQLSEAMNLYSTERRLILRGLLS 786
Query: 2371 RKGKD 2385
+ K+
Sbjct: 787 DQNKN 791
>ref|XP_006602803.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X3 [Glycine max]
Length = 2246
Score = 409 bits (1051), Expect = e-111
Identities = 280/788 (35%), Positives = 427/788 (54%), Gaps = 47/788 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
+ L+ ++EISL+ V + F K ++NC KE+IRKRLRAIN +RVQK KAGQVYGV LSG
Sbjct: 75 EGLEESREISLTQV-QNFSKKVVLNC-KEAIRKRLRAINESRVQKRKAGQVYGVALSGSQ 132
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQR EDF++ WIEGLSQPHK L SL +LVPH R+K+L LI++NVPLL
Sbjct: 133 LAKPGVFPEQRPCPEDFRKKWIEGLSQPHKRLRSLTDLVPH-VRRKSLSEVLIRNNVPLL 191
Query: 733 RAT*FI*ICM-------STAFLKKLVNPMQNNIIEINSQH-----RNI*EDLCSINALKV 876
RAT FI + S + + Q + E+ ++ + + ++ S N+
Sbjct: 192 RATWFIKVSYLNVVRPGSASIPSGTADKTQLSCSELWTKDVIEYLQTLLDEFFSKNSSHF 251
Query: 877 LKQPRGRS-----------RHYMLNGI--------------IMQLLYWHFAEGLVHRATV 981
R RS R L + I++LL WH AEGL+ + +
Sbjct: 252 TPHNRDRSPQVPYTASFQHRSDQLLSVADGEEPSLHFRWWYIVRLLQWHHAEGLLLPSLI 311
Query: 982 IDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPA 1161
IDW L QLQE+ L+ ++LLP++ F++ ++LSQ++VRT ++ +R P+
Sbjct: 312 IDWVLRQLQEKQLLEIWQLLLPIVYGFLEIVVLSQTYVRTLAGVALRIIR--DPAPGGSD 369
Query: 1162 LKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSK 1341
L DN+R AY E+LR I P+T V+LDCFPLP+ V ++ + L K
Sbjct: 370 LVDNSRRAYTTSALIEMLRYLIFAAPETFVALDCFPLPSSVVSHTINDGNFVL------K 423
Query: 1342 GLSADLNI-SKQESADSLVERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQ 1509
A I S E L K D + ++ + I IQ+ +L K+V PG
Sbjct: 424 ATEAAGKIKSSSEDVVCLFRSKGFDAQFQSLAFDHVISCIQECVEDLTKAVSPGYPGQCL 483
Query: 1510 GKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEI 1689
K Q+LD++L LGD+ AY +FE+ E++ + W++ ++ C+R SL++ T+ + +
Sbjct: 484 AKAAQALDKSLVLGDIHGAYKFLFED-HCDETVSEGWVAKVSHCLRLSLKWFVTVNKSLV 542
Query: 1690 YAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSK--SDK 1863
Y+VFFLCEWAT FR+ R+A P K TG++D+S ++IA+ ++ MK++++Q + K S
Sbjct: 543 YSVFFLCEWATCDFRDFRNAPPCDVKFTGRKDLSHVHIAIRLLKMKLRDMQISPKHKSGS 602
Query: 1864 ESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQI-FPKEYFDGNAVASEFVQSRGPIHD 2040
G +++ A S ++R+ N + + +I D N +S +S GP+HD
Sbjct: 603 TRGCGVSYLAKCSS-------QQRNQNFVNNAFKIKSSSRNLDQNICSSAVFESPGPLHD 655
Query: 2041 AIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERA 2220
IV W+D+H GLK+L + ++E IR+GIF Y+RQLI+SG +D + V++ER
Sbjct: 656 IIVCWIDQHMVHKGEGLKRLHLFIVELIRAGIFYPLAYVRQLIVSGIMDMNVNVVDLERQ 715
Query: 2221 NWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESK 2400
H IL++LP FV + E + P +E+++VY NERRF+L +G E
Sbjct: 716 KRHCRILKQLPGKFVRRALVESGISEGPRLTEALQVYLNERRFIL------RGSLWENHG 769
Query: 2401 VKANFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQ---LINELKHIISN 2571
N +++S+ + K K I + NK + + + ELK IS
Sbjct: 770 NANNVNISSLKQNHCTSSTK-DKTSTVSIDPWKSVFSNKTSSKNAKDDNGVEELKTFIST 828
Query: 2572 ILHFPDSL 2595
+L P SL
Sbjct: 829 LLQLPKSL 836
>ref|XP_006602801.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Glycine max]
gi|571548449|ref|XP_006602802.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Glycine max]
Length = 2266
Score = 409 bits (1051), Expect = e-111
Identities = 280/788 (35%), Positives = 427/788 (54%), Gaps = 47/788 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
+ L+ ++EISL+ V + F K ++NC KE+IRKRLRAIN +RVQK KAGQVYGV LSG
Sbjct: 95 EGLEESREISLTQV-QNFSKKVVLNC-KEAIRKRLRAINESRVQKRKAGQVYGVALSGSQ 152
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG+FPEQR EDF++ WIEGLSQPHK L SL +LVPH R+K+L LI++NVPLL
Sbjct: 153 LAKPGVFPEQRPCPEDFRKKWIEGLSQPHKRLRSLTDLVPH-VRRKSLSEVLIRNNVPLL 211
Query: 733 RAT*FI*ICM-------STAFLKKLVNPMQNNIIEINSQH-----RNI*EDLCSINALKV 876
RAT FI + S + + Q + E+ ++ + + ++ S N+
Sbjct: 212 RATWFIKVSYLNVVRPGSASIPSGTADKTQLSCSELWTKDVIEYLQTLLDEFFSKNSSHF 271
Query: 877 LKQPRGRS-----------RHYMLNGI--------------IMQLLYWHFAEGLVHRATV 981
R RS R L + I++LL WH AEGL+ + +
Sbjct: 272 TPHNRDRSPQVPYTASFQHRSDQLLSVADGEEPSLHFRWWYIVRLLQWHHAEGLLLPSLI 331
Query: 982 IDWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPA 1161
IDW L QLQE+ L+ ++LLP++ F++ ++LSQ++VRT ++ +R P+
Sbjct: 332 IDWVLRQLQEKQLLEIWQLLLPIVYGFLEIVVLSQTYVRTLAGVALRIIR--DPAPGGSD 389
Query: 1162 LKDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSK 1341
L DN+R AY E+LR I P+T V+LDCFPLP+ V ++ + L K
Sbjct: 390 LVDNSRRAYTTSALIEMLRYLIFAAPETFVALDCFPLPSSVVSHTINDGNFVL------K 443
Query: 1342 GLSADLNI-SKQESADSLVERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQ 1509
A I S E L K D + ++ + I IQ+ +L K+V PG
Sbjct: 444 ATEAAGKIKSSSEDVVCLFRSKGFDAQFQSLAFDHVISCIQECVEDLTKAVSPGYPGQCL 503
Query: 1510 GKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEI 1689
K Q+LD++L LGD+ AY +FE+ E++ + W++ ++ C+R SL++ T+ + +
Sbjct: 504 AKAAQALDKSLVLGDIHGAYKFLFED-HCDETVSEGWVAKVSHCLRLSLKWFVTVNKSLV 562
Query: 1690 YAVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSK--SDK 1863
Y+VFFLCEWAT FR+ R+A P K TG++D+S ++IA+ ++ MK++++Q + K S
Sbjct: 563 YSVFFLCEWATCDFRDFRNAPPCDVKFTGRKDLSHVHIAIRLLKMKLRDMQISPKHKSGS 622
Query: 1864 ESGNNIAHPAISSDGLVTGREEKRDSNRLFSIIQI-FPKEYFDGNAVASEFVQSRGPIHD 2040
G +++ A S ++R+ N + + +I D N +S +S GP+HD
Sbjct: 623 TRGCGVSYLAKCSS-------QQRNQNFVNNAFKIKSSSRNLDQNICSSAVFESPGPLHD 675
Query: 2041 AIVLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERA 2220
IV W+D+H GLK+L + ++E IR+GIF Y+RQLI+SG +D + V++ER
Sbjct: 676 IIVCWIDQHMVHKGEGLKRLHLFIVELIRAGIFYPLAYVRQLIVSGIMDMNVNVVDLERQ 735
Query: 2221 NWHKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESK 2400
H IL++LP FV + E + P +E+++VY NERRF+L +G E
Sbjct: 736 KRHCRILKQLPGKFVRRALVESGISEGPRLTEALQVYLNERRFIL------RGSLWENHG 789
Query: 2401 VKANFSVNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQ---LINELKHIISN 2571
N +++S+ + K K I + NK + + + ELK IS
Sbjct: 790 NANNVNISSLKQNHCTSSTK-DKTSTVSIDPWKSVFSNKTSSKNAKDDNGVEELKTFIST 848
Query: 2572 ILHFPDSL 2595
+L P SL
Sbjct: 849 LLQLPKSL 856
>ref|XP_006286877.1| hypothetical protein CARUB_v10000021mg [Capsella rubella]
gi|482555583|gb|EOA19775.1| hypothetical protein
CARUB_v10000021mg [Capsella rubella]
Length = 2233
Score = 408 bits (1048), Expect = e-111
Identities = 282/781 (36%), Positives = 424/781 (54%), Gaps = 43/781 (5%)
Frame = +1
Query: 373 DDLQ*NKEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPL 552
D L+ ++EI LS V F +I C KE++RK LRAIN +R K KAGQVYGVPLSG L
Sbjct: 94 DGLKESEEIILSQV-HTFSKPVVIKC-KEAVRKCLRAINESRALKRKAGQVYGVPLSGSL 151
Query: 553 LVKPGLFPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLL 732
L KPG FPEQR+ E+ K+ WIE LSQ HK L SLA+ +P GYR+K LF LI++NVPLL
Sbjct: 152 LCKPG-FPEQRSCGEETKKKWIESLSQQHKRLRSLADNIP-GYRRKTLFEVLIRNNVPLL 209
Query: 733 RAT*FI*ICM------STAFL------KKLVNPMQNNIIEINSQHRNI*EDLCSINALKV 876
RAT +I + S A + K L + + ++ + + ++L S N+
Sbjct: 210 RATWYIKVTYLNQVRPSPAAISSGTPDKTLASRCEQWTKDVIEYLQYLLDELLSRNSSFS 269
Query: 877 LKQPRGRSRHYMLNGII------------------------MQLLYWHFAEGLVHRATVI 984
+Q R RS + G + ++LL WH AEGL+ ++
Sbjct: 270 AQQTRDRSPQMLYTGSVQKISPASASLYGEETSLHFKWWYMVRLLQWHHAEGLLFPNLIV 329
Query: 985 DWFLLQLQEESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPAL 1164
DW L LQE+ + L++LLP++ +++I+LSQ++V++ V +++++ P+ L
Sbjct: 330 DWVLRLLQEKEVFEILQLLLPIVYGVLESIVLSQTYVQSLVAIAVRFIQ--EPAPGGSDL 387
Query: 1165 KDNAREAYNVIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKG 1344
DN+R AY + +E++R ++ PDT V+ DCFPLP V P++ Y Y + +
Sbjct: 388 VDNSRRAYTLSALTELVRYLVLAAPDTFVASDCFPLPPSVAACGPNDVSYSSKAYENLEK 447
Query: 1345 L---SADLNISKQ-ESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQG 1512
L +A+++I Q DS E +S TI +IQ+ A +LAK G ++N
Sbjct: 448 LRSNAAEVSIQFQGRGVDSRFE------FLSFDYTISTIQRSADDLAKIASAGYPQHNVA 501
Query: 1513 KVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIY 1692
K VQ+LD+AL+ GDVK+AY +FE++ G ++ + WI++++PC+RSSLR++ + ++ +
Sbjct: 502 KAVQALDKALSDGDVKAAYSYLFEDLCNG-AVDETWIAEVSPCLRSSLRWIVAISTSFVC 560
Query: 1693 AVFFLCEWATYYFRNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSKSDKESG 1872
+VFFL EWAT FR+ R +P K +G++D S++Y+ + ++ K+ + K G
Sbjct: 561 SVFFLIEWATCDFRDFRAGVPKDIKFSGRKDCSQVYLVIQLLKQKILGGEFARKGKIRRG 620
Query: 1873 N--NIAHPAISSDGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFVQSRGPIHDAI 2046
N N++ P S D +S GP+HD I
Sbjct: 621 NFLNVSKPNSSMDAF-----------------------------------ESPGPLHDII 645
Query: 2047 VLWLDRHESRNRVGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANW 2226
V W+D+HE +R G K+L++L+ E IRSGIFN Y+RQLI+SG +D + +V+ ER
Sbjct: 646 VCWIDQHEV-HRGGAKRLQLLVFELIRSGIFNPIAYVRQLIVSGMIDVIQPAVDPERRMR 704
Query: 2227 HKLILRRLPAPFVFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESKVK 2406
H IL++LP FV +T EE K+ SE++R YSNERR +L +KGK K+
Sbjct: 705 HHRILKQLPGCFVHETLEEAKLFGGEKLSEAVRTYSNERRLLLRELLVKKGKHWNNLKLS 764
Query: 2407 ANFS-VNSVSLCDDVFALKAGKKKIPDIPDCLKLGKNKQEKRKLQLINELKHIISNILHF 2583
S NS SL VF + D LK K+ + I ELK IS +L F
Sbjct: 765 DQKSKKNSTSLPSVVFPRTC--NAMADSEGPLKHTKSSVD------IGELKERISALLQF 816
Query: 2584 P 2586
P
Sbjct: 817 P 817
>gb|EMT17889.1| Putative mediator of RNA polymerase II transcription subunit 12
[Aegilops tauschii]
Length = 2117
Score = 403 bits (1035), Expect = e-109
Identities = 266/749 (35%), Positives = 402/749 (53%), Gaps = 36/749 (4%)
Frame = +1
Query: 391 KEISLSLVLEQFWNKSLINCNKESIRKRLRAINNARVQKCKAGQVYGVPLSGPLLVKPGL 570
+EI LS + F ++ KE+++KRLRAIN +R QK KAGQVYGVPLSG LL+KPG+
Sbjct: 79 REIVLSHI-SYFCKPDIVGKCKEALKKRLRAINESRAQKRKAGQVYGVPLSGSLLIKPGV 137
Query: 571 FPEQRASREDFKRNWIEGLSQPHKSLHSLAELVPHGYRKKALFAALIKHNVPLLRAT*FI 750
+PEQR ED +R W E L+QP+K L L+E VPHGYR+K+LF L + NVPLLRAT F+
Sbjct: 138 YPEQRPCNEDSRRKWAEALAQPNKRLRLLSEHVPHGYRRKSLFDVLTRCNVPLLRATWFV 197
Query: 751 *ICM--------------------STAFLKKLVNPMQNNIIEINSQHRN-I*EDLCSINA 867
+ S + K +V +Q + E N + + ++ S
Sbjct: 198 KVTYLNQVRPTSSSISTGASDNQRSNQWTKDVVEYLQQLLDEFNLKEAHPSFKEQPSAGL 257
Query: 868 LKVLKQPRGRSRHYMLNG------------IIMQLLYWHFAEGLVHRATVIDWFLLQLQE 1011
+ Q + + G +++L+ WH E L+ + +I+W QLQE
Sbjct: 258 ISGATQVKLKHEAPSAGGDTEEPLVHFKWWYMVRLVQWHLTEELLVPSVLIEWLCYQLQE 317
Query: 1012 ESSLDALEMLLPVLLEFVDTIILSQSHVRTFVDAIIQWLRLLFPS*NVPALKDNAREAYN 1191
S++ALE+LLP++L V+TI LSQ++VR FV+ +++ L + + DN + +
Sbjct: 318 RDSVEALELLLPIVLGLVETITLSQTYVRMFVEILVRRL-------SDASAVDNPKRSSI 370
Query: 1192 VIFFSEILRSFIIVVPDTLVSLDCFPLPACVCMLPPDNCLYPLTFYGDSKGLSADLNISK 1371
+E+LR ++ VPDT VSLDCFPLP+ V D G A L I+
Sbjct: 371 SSVIAELLRYMVLAVPDTFVSLDCFPLPSFVAP--------------DVYGRGALLKITG 416
Query: 1372 QESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRALALG 1551
S R + R +S + SIQ+RAS+LA P + KVVQ+LD+AL G
Sbjct: 417 GGEMSSSKRRDVY-RYLSCGYAVCSIQRRASDLATLASPNVHARGAAKVVQALDKALVTG 475
Query: 1552 DVKSAYHCVFEEVFTGESMPDEWISDINPCIRSSLRFMNTLESTEIYAVFFLCEWATYYF 1731
++ AY +F ++ + M + WI +++PC++SSL ++ T+E + I ++FFLCEWAT +
Sbjct: 476 NLTMAYSSLFNDL-SDALMEERWIKEVSPCLQSSLMWIGTVELSLICSIFFLCEWATCDY 534
Query: 1732 RNHRDALPVGQKVTGKRDISRIYIAVSVMIMKMKELQKTSKSDKESG---NNIAHPAISS 1902
R+ R + K TG+RD+S+I++AVS++ KM E+ K S+S S NNI + +
Sbjct: 535 RDCRTSPSQNVKFTGRRDLSQIHLAVSILKNKMTEMNKLSRSKSSSRIAMNNIGKGSSLN 594
Query: 1903 DGLVTGREEKRDSNRLFSIIQIFPKEYFDGNAVASEFVQSRGPIHDAIVLWLDRHESRNR 2082
D V + DS+ L S + + + +S GP+HD IV WLD+HE +
Sbjct: 595 DASVAATKVG-DSSGLRS-----NGKNEEEKKERKDIFESPGPLHDIIVCWLDQHEVSSA 648
Query: 2083 VGLKQLEVLLLEFIRSGIFNLHVYLRQLIISGTLDKRESSVEIERANWHKLILRRLPAPF 2262
G K+++VL++E IRSG+F Y+RQLIISG DK + +++ER H IL++LP
Sbjct: 649 AGFKRVDVLIIELIRSGVFYPQAYVRQLIISGVTDKNGTLLDMERKRRHHRILKQLPGSS 708
Query: 2263 VFQTFEEVKMELDPMFSESIRVYSNERRFVLESFQKRKGKDREESKVKANFSVNSVSLCD 2442
+F EE + + E + YS+ERR VL + D AN +S S
Sbjct: 709 LFDILEEDVVAEEQQLHEVMSTYSSERRLVLSELSSGQSFD-------ANNRGSSTSTLT 761
Query: 2443 DVFALKAGKKKIPDIPDCLKLGKNKQEKR 2529
V G+ K DC+++ K ++R
Sbjct: 762 QV---DTGEAK-NGCEDCMRINGQKLDER 786