BLASTX nr result

ID: Ephedra27_contig00007222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00007222
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363060.1| PREDICTED: UPF0503 protein At3g09070, chloro...    59   7e-07
ref|XP_002308207.2| glycine-rich family protein [Populus trichoc...    57   2e-06
ref|XP_004246848.1| PREDICTED: UPF0503 protein At3g09070, chloro...    57   2e-06
ref|XP_006848102.1| hypothetical protein AMTR_s00029p00213140 [A...    57   3e-06
ref|XP_004302647.1| PREDICTED: UPF0503 protein At3g09070, chloro...    57   3e-06
ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...    56   6e-06

>ref|XP_006363060.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Solanum
           tuberosum]
          Length = 659

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/111 (33%), Positives = 62/111 (55%)
 Frame = -1

Query: 424 GGDSECNEAWREFPRDKDPRRGLRKGDVFSHSSISSRTNSGIQCNAANGRNPLSTGNIIN 245
           G +   +E+W++   + D R G+ +    S+SS+S R ++GI  +  + R          
Sbjct: 539 GVERSFSESWQDLRTNGDVRGGVNRKVFRSNSSVSWRNSTGIGGSFGSMRK--------- 589

Query: 244 RCNSNSSAQRNKNVNGCQRKREEIMLDRSRSVHISSNNGDNGLLRFYLTPL 92
                SS + N +V   ++KR++I+L+R+RS   S N+ DNGLLRFYL P+
Sbjct: 590 -----SSVEMNGHV---KKKRDDIVLERNRSARYSPNHLDNGLLRFYLAPM 632


>ref|XP_002308207.2| glycine-rich family protein [Populus trichocarpa]
           gi|550335887|gb|EEE91730.2| glycine-rich family protein
           [Populus trichocarpa]
          Length = 683

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
 Frame = -1

Query: 415 SECNEAWREFPRDKDPRRGLRKGDV---FSHSSISSRTNSGIQCNAANGRNPLSTGNIIN 245
           S  N   R F       RG R GDV   F+   +  R+NS +     + RN  + G    
Sbjct: 556 SRANGVERSFSESWPELRGERNGDVRGGFNPKML--RSNSSV-----SWRNSHNFGG--- 605

Query: 244 RCNSNSSAQRNK---NVNGCQRKREEIMLDRSRSVHISSNNGDNGLLRFYLTPL 92
              S SSA+++    N NG ++KR+E +L+R+RS   S NN DNGLLRFYLTPL
Sbjct: 606 --GSFSSARKSSVETNGNG-RKKRDEFVLERNRSARYSPNNMDNGLLRFYLTPL 656


>ref|XP_004246848.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Solanum
           lycopersicum]
          Length = 659

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/111 (33%), Positives = 61/111 (54%)
 Frame = -1

Query: 424 GGDSECNEAWREFPRDKDPRRGLRKGDVFSHSSISSRTNSGIQCNAANGRNPLSTGNIIN 245
           G +   +E+W++   + D R G+ +    S+SS+S R ++GI  +  + R          
Sbjct: 539 GVERSFSESWQDLRTNGDVRGGVNRKVFRSNSSVSWRNSTGIGGSFGSMRK--------- 589

Query: 244 RCNSNSSAQRNKNVNGCQRKREEIMLDRSRSVHISSNNGDNGLLRFYLTPL 92
                SS   N +V   ++KR++I+L+R+RS   S N+ DNGLLRFYL P+
Sbjct: 590 -----SSVDMNGHV---KKKRDDIVLERNRSSRYSPNHIDNGLLRFYLAPM 632


>ref|XP_006848102.1| hypothetical protein AMTR_s00029p00213140 [Amborella trichopoda]
           gi|548851407|gb|ERN09683.1| hypothetical protein
           AMTR_s00029p00213140 [Amborella trichopoda]
          Length = 759

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -1

Query: 418 DSECNEAWREFPRDKDPRRGLRKGDVFSHSSISSRTNSGIQCNAANGRNPLSTGNIINRC 239
           D   +E+W+E   +    R LR  ++ S+SS+SSR++ G   N   GR   S GN+    
Sbjct: 636 DHSFSESWQERESNGVGDRVLRMKELRSNSSVSSRSSYG---NGWTGRRG-SLGNL---- 687

Query: 238 NSNSSAQRNKNVNGCQRKREEIMLDRSRSVHISS--NNGDNGLLRFYLTPL 92
                 QR  +    Q+KR+EI+++R+RS   S   +N DNGLLRFYLTP+
Sbjct: 688 ------QREGSAR-YQKKRDEIVIERNRSARYSPGHHNIDNGLLRFYLTPM 731


>ref|XP_004302647.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 698

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
 Frame = -1

Query: 424 GGDSECNEAWREFPRDKDPRRGLRKGDVFSHSSISSRTNSGIQCNAANGRNPLSTGN--- 254
           G +   +E+W E         G R G+  S +    R+NS     +A+ RN  S G    
Sbjct: 555 GVERSFSESWPELRGG-----GERNGESKSFNPKIMRSNS-----SASWRNSHSFGGGGF 604

Query: 253 ---------IINRCNSNSSAQRNKNVNGC---QRKREEIMLDRSRSVHISSNNGDNGLLR 110
                    +    N N +A  N +VNG    ++K+EEI+L+R+RS   S N+ DNGLLR
Sbjct: 605 GSMRKNGAVVEPNVNGNGNANGNVSVNGNGIGRKKKEEIVLERNRSARYSPNHIDNGLLR 664

Query: 109 FYLTPL 92
           FYLTP+
Sbjct: 665 FYLTPM 670


>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
 Frame = -1

Query: 424 GGDSECNEAWREFPRDKDPRRGLRKGDVF-SHSSISSRTNSGIQCNAANGRNPLSTGNII 248
           G +   +E+W E        RG R GDV  + +    R+NS +     + RN  + G   
Sbjct: 541 GVERSLSESWPEL-------RGERNGDVRGAFNRKVFRSNSSV-----SSRNSFTMGGSF 588

Query: 247 NRCNSNSSAQRNKNVNGCQRKREEIMLDRSRSVHISSNNGDNGLLRFYLTPL 92
           +    +S+     N +G +++R+E +L+R+RS   S NN DNGLLRFYLTPL
Sbjct: 589 SSTRKSSA---ESNGHG-KKRRDEFVLERNRSARYSPNNIDNGLLRFYLTPL 636


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