BLASTX nr result
ID: Ephedra27_contig00007049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00007049
(1150 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314911.1| pentatricopeptide repeat-containing family p... 155 1e-40
ref|XP_002514567.1| pentatricopeptide repeat-containing protein,... 150 7e-39
ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi... 149 2e-38
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat... 149 2e-38
gb|EMJ28165.1| hypothetical protein PRUPE_ppa025241mg [Prunus pe... 150 3e-38
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi... 148 5e-38
ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citr... 145 2e-37
ref|XP_006285896.1| hypothetical protein CARUB_v10007408mg [Caps... 145 3e-37
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ... 146 3e-37
gb|EOY01550.1| Pentatricopeptide repeat-containing protein [Theo... 141 1e-36
gb|ESW10304.1| hypothetical protein PHAVU_009G197900g [Phaseolus... 143 1e-36
ref|NP_193809.2| pentatricopeptide repeat-containing protein [Ar... 144 2e-36
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat... 141 4e-36
ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat... 144 4e-36
ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|5... 132 1e-35
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat... 140 1e-35
gb|EXB59779.1| hypothetical protein L484_010890 [Morus notabilis] 145 2e-35
ref|XP_004509764.1| PREDICTED: putative pentatricopeptide repeat... 141 3e-35
ref|XP_006391071.1| hypothetical protein EUTSA_v10019713mg [Eutr... 141 3e-35
ref|XP_002887214.1| pentatricopeptide repeat-containing protein ... 141 4e-35
>ref|XP_002314911.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222863951|gb|EEF01082.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 743
Score = 155 bits (391), Expect(2) = 1e-40
Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 3/249 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+D G+QIH ++K GFG+ ++V +SLV+MY+K G A +VF + +N + + TMI+
Sbjct: 154 VDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGL-VSVASQVFDEVQERNVVMYNTMIT 212
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
RSG ++D+ L + + + +M++GL+ N E A LF+ M + G +D++T
Sbjct: 213 GLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYT 272
Query: 366 FCSILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F S+LTAC R G +IH I++SG +++VG+AL+ MYCK A VF M
Sbjct: 273 FGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMA 332
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
N V++ ML G+ +NGF EA+ + +M + F L I +C +L +++G Q
Sbjct: 333 NKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 717 LHAHALRVG 743
H AL G
Sbjct: 393 FHCQALVSG 401
Score = 40.0 bits (92), Expect(2) = 1e-40
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITFRALQPA 921
RD SW A++ G+ Q G N+ + LF+ M+ G +KP+ +TF A+ A
Sbjct: 435 RDEVSWTALVSGYAQFGKANETIDLFERMLVQG-LKPDAVTFIAVLSA 481
Score = 135 bits (341), Expect(2) = 2e-32
Identities = 87/288 (30%), Positives = 140/288 (48%), Gaps = 37/288 (12%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
Q K++H L+IKS ++ N+L+N YSK G +A VF MP N SW TM+SA+
Sbjct: 23 QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGN-ITYARHVFDKMPQPNSFSWNTMLSAY 81
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAG-FKVDKFTF 368
++SG + + P + + +NS++SG V A + M+K G +++ TF
Sbjct: 82 SKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITF 141
Query: 369 CSILT-----ACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMM 533
++L C D G QIHG IVK G +++VG++L+ MY KM L A +VF +
Sbjct: 142 STMLLLVSSQGCVD--LGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEV 199
Query: 534 TQHNQVTYIVMLCGFSR-------------------------------NGFQLEALDLLR 620
+ N V Y M+ G R NG + EA+DL R
Sbjct: 200 QERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFR 259
Query: 621 EMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLDVGV 764
+M + ++++ + ACG L + +G+++H +R G+ +V V
Sbjct: 260 DMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFV 307
Score = 31.6 bits (70), Expect(2) = 2e-32
Identities = 14/41 (34%), Positives = 28/41 (68%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
+++ SW AM++G+ Q+G +A+++F M G I+P++ T
Sbjct: 334 KNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG-IEPDDFT 373
Score = 94.7 bits (234), Expect = 6e-17
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L +GK+IH L+I+SG+ N++V ++LV+MY K +A VF M KN +SW M+
Sbjct: 286 LKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKC-RSVRYAEAVFKRMANKNVVSWTAMLV 344
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G E A +F M + G + D FT
Sbjct: 345 GYGQNGF-------------------------------SEEAVRVFCDMQRNGIEPDDFT 373
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q H + SG+ + V ALI++Y K ++ ++F M+
Sbjct: 374 LGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS 433
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ ++ G+++ G E +DL M + + + AC G V++G+Q
Sbjct: 434 FRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQ 493
Query: 717 LHAHALRVGHGL 752
L+ HG+
Sbjct: 494 YFESMLK-DHGI 504
>ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546171|gb|EEF47673.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 515
Score = 150 bits (380), Expect(2) = 7e-39
Identities = 89/259 (34%), Positives = 143/259 (55%), Gaps = 3/259 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+D G+QIH ++K GFG ++V + LV+MY+K G E A +VF MP +N + TMI+
Sbjct: 157 VDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYE-AKKVFDEMPDRNVVMHNTMIT 215
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ G M+D+ L + + + +M++GLV N EE A F++M G +D++T
Sbjct: 216 GLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYT 275
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F S+LTAC + G Q+H I++S +++VG+AL+ MYCK + A VF M
Sbjct: 276 FGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRMK 335
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
N V++ +L G+ +NGF EA+ + +M + F L I +C +L +++G Q
Sbjct: 336 YKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQ 395
Query: 717 LHAHALRVGHGLDVGVCNS 773
H AL G + V N+
Sbjct: 396 FHCRALVSGLISSITVSNA 414
Score = 38.1 bits (87), Expect(2) = 7e-39
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
RD SW A+I G+ Q G + ++LF+ M+ G +KP+ +TF
Sbjct: 438 RDEVSWTALISGYAQFGKARETIELFERMLAHG-LKPDAVTF 478
Score = 127 bits (318), Expect = 1e-26
Identities = 80/277 (28%), Positives = 141/277 (50%), Gaps = 35/277 (12%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
Q K++H +IK+ ++ N+L+N Y K G A +A +F MP +N SW T++SA+
Sbjct: 26 QAKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIA-YARHLFDGMPQRNSFSWNTILSAY 84
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAG-FKVDKFTF 368
++SG + + P + + +N++LSG +A + M++ G F +++ TF
Sbjct: 85 SKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITF 144
Query: 369 CS--ILTACRD-PSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVF----- 524
+ IL + R+ G QIHGHI+K G +++VG+ L+ MY K L +EA KVF
Sbjct: 145 STMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPD 204
Query: 525 -------TMMT-------------------QHNQVTYIVMLCGFSRNGFQLEALDLLREM 626
TM+T + + +++ M+ G +NG + EA+D R+M
Sbjct: 205 RNVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQM 264
Query: 627 YNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALR 737
++++ + ACG L + +G+Q+HA +R
Sbjct: 265 RLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIR 301
Score = 82.8 bits (203), Expect = 2e-13
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L +GKQ+HA +I+S N++V ++LV+MY K + +A VF M KN +SW ++
Sbjct: 289 LREGKQVHAFIIRSDCTDNVFVGSALVDMYCKC-KILRYAEAVFKRMKYKNVVSWTAILV 347
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G ++A+ + F M + G + D FT
Sbjct: 348 GYGQNGFSEEAVKV-------------------------------FCDMQRNGIEPDDFT 376
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q H + SG+ + V AL+++Y K ++ ++F M
Sbjct: 377 LGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMN 436
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ ++ G+++ G E ++L M + ++AC G V +G+Q
Sbjct: 437 FRDEVSWTALISGYAQFGKARETIELFERMLAHGLKPDAVTFIGVLLACSRAGLVARGQQ 496
>ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
[Cucumis sativus]
Length = 908
Score = 149 bits (376), Expect(2) = 2e-38
Identities = 84/260 (32%), Positives = 148/260 (56%), Gaps = 6/260 (2%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
+G+Q+HAL +K G S+L VS+SL+ Y+K G + +F MP ++ I+W MI+++
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVT-DLFETMPIRDVITWTGMITSY 374
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFC 371
G + A+ + + P ++ + YN++L+GL N + A LF +M++ G ++ T
Sbjct: 375 MEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLT 434
Query: 372 SILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQH 542
SI+TAC + QI G ++K GI + + TAL+ MY + +A K+F +
Sbjct: 435 SIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLE 494
Query: 543 NQVTYIV--MLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVA-CGSLGCVDKGR 713
N T ++ M+CG++RNG EA+ L ++ ++ +S +I++ CGS+G + G+
Sbjct: 495 NDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGK 554
Query: 714 QLHAHALRVGHGLDVGVCNS 773
Q+H HAL+ G + GV N+
Sbjct: 555 QMHCHALKSGLITETGVGNA 574
Score = 37.7 bits (86), Expect(2) = 2e-38
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
+DI SWN ++ G V H +KAL +++ M G IKP+ ITF
Sbjct: 598 QDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAG-IKPDSITF 638
Score = 93.6 bits (231), Expect = 1e-16
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 4/234 (1%)
Frame = +3
Query: 177 MISAFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVD 356
+ISA+ + G ++DA + +++ Y +++SG + E+ A LF M+ +G + +
Sbjct: 136 LISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPN 195
Query: 357 KFTFCSILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFT 527
++TF +ILTAC D G Q+HG +VK G+ +++ AL+ +YCK ++F
Sbjct: 196 EYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFE 255
Query: 528 MMTQHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGV-LNKFALSRTIVACGSLGCVD 704
M + + ++ ++ + EA D R M G+ ++ F+LS + AC
Sbjct: 256 EMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPM 315
Query: 705 KGRQLHAHALRVGHGLDVGVCNSXKRYFFLECYDSWIRSAWNDE*SFATLPVDD 866
KG+QLHA AL+VG + V +S F+ +C SA + F T+P+ D
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIG-FYTKC-----GSANDVTDLFETMPIRD 363
Score = 88.2 bits (217), Expect = 6e-15
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 35/278 (12%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G Q+H +V+K G S +++ N+L+ +Y K G F+++
Sbjct: 215 GSQVHGIVVKLGLLSCVFICNALMGLYCKCG---------FLDL---------------- 249
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKM-IKAGFKVDKFTFC 371
L L ++ P + + +N+++S LV + + A F+ M + G KVD F+
Sbjct: 250 -------VLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLS 302
Query: 372 SILTACRD---PSFGMQIHGHIVKSGIERHLWVGTALISMYCKMS--------------- 497
++LTAC P G Q+H +K G+E HL V ++LI Y K
Sbjct: 303 TLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIR 362
Query: 498 --LPW--------------EAYKVFTMMTQHNQVTYIVMLCGFSRNGFQLEALDLLREMY 629
+ W A +VF M + N ++Y +L G SRN AL+L EM
Sbjct: 363 DVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEML 422
Query: 630 NKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVG 743
+ ++ L+ I ACG L +Q+ ++ G
Sbjct: 423 EEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460
Score = 64.7 bits (156), Expect = 7e-08
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Frame = +3
Query: 18 KQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEIS--WATMISAF 191
+QI V+K G SN + +LV+MY++ G E A ++F +N+ + +MI +
Sbjct: 450 QQIQGFVMKFGILSNSCIETALVDMYTRCGR-MEDAEKIFYQRSLENDYTAMLTSMICGY 508
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFC 371
R+G++ +A++L H+ + E A ++ D+
Sbjct: 509 ARNGKLNEAISLF-------------------HSGQSEGAIVM-----------DEVMST 538
Query: 372 SILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQH 542
SIL+ C F G Q+H H +KSG+ VG A +SMY K +A +VF M
Sbjct: 539 SILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQ 598
Query: 543 NQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLN---KFALSRTIVACGSLGCVDKGR 713
+ V++ ++ G + +AL + ++M K G+ FAL + L VD R
Sbjct: 599 DIVSWNGLVAGHVLHWQGDKALGIWKKM-EKAGIKPDSITFALIISAYKHTELNLVDSCR 657
Query: 714 QL 719
L
Sbjct: 658 SL 659
Score = 63.5 bits (153), Expect = 1e-07
Identities = 39/138 (28%), Positives = 70/138 (50%)
Frame = +3
Query: 360 FTFCSILTACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQ 539
F + T DP +H +K +E +++G ALIS Y K+ L +A KVF+ ++
Sbjct: 101 FDLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSC 158
Query: 540 HNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQL 719
N V+Y ++ GFS++ ++ EA++L M + N++ + AC G Q+
Sbjct: 159 PNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQV 218
Query: 720 HAHALRVGHGLDVGVCNS 773
H +++G V +CN+
Sbjct: 219 HGIVVKLGLLSCVFICNA 236
>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
unnamed protein product [Vitis vinifera]
Length = 743
Score = 149 bits (375), Expect(2) = 2e-38
Identities = 86/249 (34%), Positives = 141/249 (56%), Gaps = 3/249 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+D G+QI+ ++K GFGS+++V + LV+MY+K G + A R F MP +N + TMI+
Sbjct: 154 VDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYD-AKRYFDEMPERNVVMCNTMIT 212
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
R G ++++ L + + + M++GL+ N E A +F++M AGF +D+FT
Sbjct: 213 GLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFT 272
Query: 366 FCSILTACRDP---SFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F S+LTAC G QIH +++++ + +++VG+AL+ MY K A VF M
Sbjct: 273 FGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMP 332
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
Q N +++ ML G+ +NGF EA+ + EM + F L I +C +L +++G Q
Sbjct: 333 QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 717 LHAHALRVG 743
H AL G
Sbjct: 393 FHCRALVSG 401
Score = 38.1 bits (87), Expect(2) = 2e-38
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
RD SW A++ G+ Q G N+ + LF+ M+ G +KP+ +TF
Sbjct: 435 RDEVSWTALLAGYAQFGKANETIGLFERMLAHG-LKPDGVTF 475
Score = 129 bits (324), Expect(2) = 5e-31
Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 38/283 (13%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
Q K++H L++K+ ++SN+L+ Y K G A +A+ VF ++P N SW T++S +
Sbjct: 23 QAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLA-YAHHVFDHIPQPNLFSWNTILSVY 81
Query: 192 TRSG---QMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIK-AGFKVDK 359
++ G QMQ NL+ P + + +N +SG + +A +++ M+K A +++
Sbjct: 82 SKLGLLSQMQQIFNLM---PFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNR 138
Query: 360 FTFCSILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTM 530
TF ++L C R G QI+G I+K G ++VG+ L+ MY K+ L ++A + F
Sbjct: 139 ITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDE 198
Query: 531 MTQHN-------------------------------QVTYIVMLCGFSRNGFQLEALDLL 617
M + N +++ +M+ G +NG + EALD+
Sbjct: 199 MPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMF 258
Query: 618 REMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGH 746
REM +++F + ACGSL + +G+Q+HA+ +R H
Sbjct: 259 REMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH 301
Score = 33.1 bits (74), Expect(2) = 5e-31
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +1
Query: 775 ERDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
++++ SW AM++G+ Q+G +A+++F M G ++P++ T
Sbjct: 333 QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNG-VEPDDFT 373
Score = 88.6 bits (218), Expect = 4e-15
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L +GKQIHA VI++ N++V ++LV+MYSK
Sbjct: 286 LGEGKQIHAYVIRTDHKDNVFVGSALVDMYSK---------------------------- 317
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
++ A + K+ P ++++ + +ML G N E A +F +M + G + D FT
Sbjct: 318 ----CRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFT 373
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q H + SG+ + V ALI++Y K ++++FT M
Sbjct: 374 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMN 433
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ +L G+++ G E + L M + + AC G V+KG Q
Sbjct: 434 IRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQ 493
Query: 717 LHAHALRVGHGL 752
++ HG+
Sbjct: 494 YFESMIK-EHGI 504
Score = 55.8 bits (133), Expect(2) = 2e-09
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Frame = +3
Query: 261 YNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCSILTACRDPSFGMQIHGHIVKSG 440
Y S+L ++ + A L ++K + + F +++TA G + H V
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYY--KLGNLAYAHHVFDH 65
Query: 441 IER-HLWVGTALISMYCKMSLPWEAYKVFTMMTQHNQVTYIVMLCGFSRNGFQLEALDLL 617
I + +L+ ++S+Y K+ L + ++F +M + V++ + + G++ G +A+ +
Sbjct: 66 IPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY 125
Query: 618 REMYNKFGV-LNKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLDV------------ 758
+ M + LN+ S ++ C CVD GRQ++ L+ G G DV
Sbjct: 126 KLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185
Query: 759 -GVCNSXKRYF 788
G+ KRYF
Sbjct: 186 LGLIYDAKRYF 196
Score = 33.9 bits (76), Expect(2) = 2e-09
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 769 IXERDIFSWNAMILGFVQHGMMNKALQLFQLM 864
+ ERD SW MI G +Q+G+ +AL +F+ M
Sbjct: 230 LKERDSISWTIMITGLMQNGLEREALDMFREM 261
>gb|EMJ28165.1| hypothetical protein PRUPE_ppa025241mg [Prunus persica]
Length = 743
Score = 150 bits (380), Expect(2) = 3e-38
Identities = 84/246 (34%), Positives = 141/246 (57%), Gaps = 3/246 (1%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G+Q+H ++K GF S ++V + LV+MYSK G + A RVF +MP +N + + T+I+
Sbjct: 157 GRQLHGHIVKFGFESYVFVGSPLVDMYSKAGLILD-AKRVFNSMPERNVVMYNTLITGLL 215
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
R G ++D+ L + P + + + +M++GL N A F++MI G +D++TF S
Sbjct: 216 RCGLIEDSECLFSKMPEKDSISWTTMITGLTQNGSGSKALDKFREMILEGLSMDQYTFGS 275
Query: 375 ILTACRDP---SFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+LTAC G Q+H +I+++ + +++VG+AL+ MYCK A VF M+ N
Sbjct: 276 VLTACGGLFALEEGKQVHAYIIRTELIDNIFVGSALVDMYCKCRSIKAAEGVFKRMSYKN 335
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHA 725
V++ ML G+ +NG+ EA+ + +M K + F L I +C +L +++G Q H
Sbjct: 336 VVSWTAMLVGYGQNGYSEEAVRVFCDMQRKGVEPDDFTLGSVISSCANLASLEEGAQFHC 395
Query: 726 HALRVG 743
AL G
Sbjct: 396 QALASG 401
Score = 35.8 bits (81), Expect(2) = 3e-38
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
RD SW A++ G+ Q G + + LF+ M+ G +KP+ +TF
Sbjct: 435 RDEVSWTALVSGYAQFGKAYETIDLFERMLAHG-LKPDGVTF 475
Score = 120 bits (300), Expect(2) = 3e-27
Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 35/277 (12%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
Q K++H +IK+ ++ N+++ Y + G +A VF MP SW ++S +
Sbjct: 23 QAKKLHCHIIKTVASPETFLLNNIITTYGRLGN-LRYARHVFDQMPHPTLFSWNAILSVY 81
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGF-KVDKFTF 368
++SG + D + + P + +NS +SG A + M+ G +++ TF
Sbjct: 82 SKSGYLSDMQEIFDRMPRLDGVSWNSFISGHASCGLLAEAVKFYSLMLTDGAANLNRITF 141
Query: 369 CSILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQ 539
++L C R + G Q+HGHIVK G E +++VG+ L+ MY K L +A +VF M +
Sbjct: 142 STMLVLCSSQRCVNLGRQLHGHIVKFGFESYVFVGSPLVDMYSKAGLILDAKRVFNSMPE 201
Query: 540 HNQVTY-------------------------------IVMLCGFSRNGFQLEALDLLREM 626
N V Y M+ G ++NG +ALD REM
Sbjct: 202 RNVVMYNTLITGLLRCGLIEDSECLFSKMPEKDSISWTTMITGLTQNGSGSKALDKFREM 261
Query: 627 YNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALR 737
+ ++++ + ACG L +++G+Q+HA+ +R
Sbjct: 262 ILEGLSMDQYTFGSVLTACGGLFALEEGKQVHAYIIR 298
Score = 30.0 bits (66), Expect(2) = 3e-27
Identities = 13/41 (31%), Positives = 28/41 (68%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
+++ SW AM++G+ Q+G +A+++F M G ++P++ T
Sbjct: 334 KNVVSWTAMLVGYGQNGYSEEAVRVFCDMQRKG-VEPDDFT 373
Score = 90.5 bits (223), Expect = 1e-15
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L++GKQ+HA +I++ N++V ++LV+MY K + A VF M KN +SW M+
Sbjct: 286 LEEGKQVHAYIIRTELIDNIFVGSALVDMYCK-CRSIKAAEGVFKRMSYKNVVSWTAMLV 344
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G ++A+ +F M + G + D FT
Sbjct: 345 GYGQNGYSEEAVR-------------------------------VFCDMQRKGVEPDDFT 373
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q H + SG+ + V AL+++Y K +++++F M
Sbjct: 374 LGSVISSCANLASLEEGAQFHCQALASGLISFITVSNALVTLYGKCGSIEDSHRLFNEMN 433
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ ++ G+++ G E +DL M + + AC G VDKG Q
Sbjct: 434 IRDEVSWTALVSGYAQFGKAYETIDLFERMLAHGLKPDGVTFIGVLSACSRAGLVDKGHQ 493
>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
[Cucumis sativus]
Length = 908
Score = 148 bits (373), Expect(2) = 5e-38
Identities = 84/260 (32%), Positives = 147/260 (56%), Gaps = 6/260 (2%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
+G+Q+HAL +K G S+L VS+SL+ Y+K G + +F MP ++ I+W MI+++
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVT-DLFETMPIRDVITWTGMITSY 374
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFC 371
G + A+ + + P ++ + YN++L+GL N + A LF +M++ G ++ T
Sbjct: 375 MEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLT 434
Query: 372 SILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQH 542
SI+TAC + QI G ++K GI + + TAL+ MY + +A K+F +
Sbjct: 435 SIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLE 494
Query: 543 NQVTYIV--MLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVA-CGSLGCVDKGR 713
N T ++ M+CG++RNG EA+ L ++ ++ +S +I++ CGS+G + G
Sbjct: 495 NDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGM 554
Query: 714 QLHAHALRVGHGLDVGVCNS 773
Q+H HAL+ G + GV N+
Sbjct: 555 QMHCHALKSGLITETGVGNA 574
Score = 37.7 bits (86), Expect(2) = 5e-38
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
+DI SWN ++ G V H +KAL +++ M G IKP+ ITF
Sbjct: 598 QDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAG-IKPDSITF 638
Score = 93.6 bits (231), Expect = 1e-16
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 4/234 (1%)
Frame = +3
Query: 177 MISAFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVD 356
+ISA+ + G ++DA + +++ Y +++SG + E+ A LF M+ +G + +
Sbjct: 136 LISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPN 195
Query: 357 KFTFCSILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFT 527
++TF +ILTAC D G Q+HG +VK G+ +++ AL+ +YCK ++F
Sbjct: 196 EYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFE 255
Query: 528 MMTQHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGV-LNKFALSRTIVACGSLGCVD 704
M + + ++ ++ + EA D R M G+ ++ F+LS + AC
Sbjct: 256 EMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPM 315
Query: 705 KGRQLHAHALRVGHGLDVGVCNSXKRYFFLECYDSWIRSAWNDE*SFATLPVDD 866
KG+QLHA AL+VG + V +S F+ +C SA + F T+P+ D
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIG-FYTKC-----GSANDVTDLFETMPIRD 363
Score = 88.2 bits (217), Expect = 6e-15
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 35/278 (12%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G Q+H +V+K G S +++ N+L+ +Y K G F+++
Sbjct: 215 GSQVHGIVVKLGLLSCVFICNALMGLYCKCG---------FLDL---------------- 249
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKM-IKAGFKVDKFTFC 371
L L ++ P + + +N+++S LV + + A F+ M + G KVD F+
Sbjct: 250 -------VLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLS 302
Query: 372 SILTACRD---PSFGMQIHGHIVKSGIERHLWVGTALISMYCKMS--------------- 497
++LTAC P G Q+H +K G+E HL V ++LI Y K
Sbjct: 303 TLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIR 362
Query: 498 --LPW--------------EAYKVFTMMTQHNQVTYIVMLCGFSRNGFQLEALDLLREMY 629
+ W A +VF M + N ++Y +L G SRN AL+L EM
Sbjct: 363 DVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEML 422
Query: 630 NKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVG 743
+ ++ L+ I ACG L +Q+ ++ G
Sbjct: 423 EEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460
Score = 67.0 bits (162), Expect = 1e-08
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 8/242 (3%)
Frame = +3
Query: 18 KQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEIS--WATMISAF 191
+QI V+K G SN + +LV+MY++ G E A ++F +N+ + +MI +
Sbjct: 450 QQIQGFVMKFGILSNSCIETALVDMYTRCGR-MEDAEKIFYQRSLENDYTAMLTSMICGY 508
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFC 371
R+G++ +A++L H+ + E A ++ D+
Sbjct: 509 ARNGKLNEAISLF-------------------HSGQSEGAIVM-----------DEVMST 538
Query: 372 SILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQH 542
SIL+ C F GMQ+H H +KSG+ VG A +SMY K +A +VF M
Sbjct: 539 SILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQ 598
Query: 543 NQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLN---KFALSRTIVACGSLGCVDKGR 713
+ V++ ++ G + +AL + ++M K G+ FAL + L VD R
Sbjct: 599 DIVSWNGLVAGHVLHWQGDKALGIWKKM-EKAGIKPDSITFALIISAYKHTELNLVDSCR 657
Query: 714 QL 719
L
Sbjct: 658 SL 659
Score = 63.5 bits (153), Expect = 1e-07
Identities = 39/138 (28%), Positives = 70/138 (50%)
Frame = +3
Query: 360 FTFCSILTACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQ 539
F + T DP +H +K +E +++G ALIS Y K+ L +A KVF+ ++
Sbjct: 101 FDLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSC 158
Query: 540 HNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQL 719
N V+Y ++ GFS++ ++ EA++L M + N++ + AC G Q+
Sbjct: 159 PNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQV 218
Query: 720 HAHALRVGHGLDVGVCNS 773
H +++G V +CN+
Sbjct: 219 HGIVVKLGLLSCVFICNA 236
>ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citrus clementina]
gi|568861577|ref|XP_006484277.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like [Citrus sinensis]
gi|557540025|gb|ESR51069.1| hypothetical protein
CICLE_v10033304mg [Citrus clementina]
Length = 743
Score = 145 bits (366), Expect(2) = 2e-37
Identities = 87/264 (32%), Positives = 145/264 (54%), Gaps = 3/264 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+D G+QIH ++K GFGS ++V + LV+MY+K G + A R F +P KN + + TMI+
Sbjct: 154 VDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYD-AKRGFDELPEKNIVMYNTMIT 212
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
R G ++++ L + + + + +M++GL+ N E A LF++M G +D+FT
Sbjct: 213 GLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREMRLEGLAMDQFT 272
Query: 366 FCSILTACRDP---SFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F S+LTAC G QIH I+++ + +++VG+AL+ MYCK A VF M
Sbjct: 273 FGSVLTACGGLLALEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKCKSIKYAESVFRKMA 332
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
+ N V++ ML G+ +NG EA+ + M + F L I +C +L +++G Q
Sbjct: 333 RKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEPDDFTLGSVISSCANLASLEEGTQ 392
Query: 717 LHAHALRVGHGLDVGVCNSXKRYF 788
H +L G + V N+ ++
Sbjct: 393 FHGRSLVTGLISFITVSNALVTFY 416
Score = 38.5 bits (88), Expect(2) = 2e-37
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
RD SW A++ G+ + G N+ + LF+ M+ G +KP+E+T
Sbjct: 435 RDEVSWTALVSGYAKFGKANETIDLFEKMLSHG-LKPDEVT 474
Score = 135 bits (339), Expect = 4e-29
Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 35/280 (12%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
Q K+IH L+IK+ ++SN LVN YSK G ++A R+F M N SW T++SA+
Sbjct: 23 QLKKIHCLIIKTLTDPETFLSNCLVNCYSKVGN-IKYARRLFDKMAQPNLFSWNTILSAY 81
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGF-KVDKFTF 368
++SG + + ++ P + +N ++SG + +A ++ M+K G + + TF
Sbjct: 82 SKSGNLSEMNSVFHYMPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNLSRITF 141
Query: 369 CSIL---TACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQ 539
++L ++ R G QIHGHI+K G +++VG+ L+ MY K+ L ++A + F + +
Sbjct: 142 STMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGFDELPE 201
Query: 540 HNQVTYIVMLCGFSR-------------------------------NGFQLEALDLLREM 626
N V Y M+ G R NG + EA+DL REM
Sbjct: 202 KNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAIDLFREM 261
Query: 627 YNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGH 746
+ +++F + ACG L +++G+Q+HA +R H
Sbjct: 262 RLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIRNDH 301
Score = 97.4 bits (241), Expect = 9e-18
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 3/239 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L++GKQIHA +I++ N++V ++LV+MY K + ++A VF M KN +SW M+
Sbjct: 286 LEEGKQIHAFIIRNDHKDNVFVGSALVDMYCKC-KSIKYAESVFRKMARKNVVSWTAMLV 344
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G ++A+ +F M + G + D FT
Sbjct: 345 GYGQNGCSEEAVK-------------------------------IFCNMQRNGIEPDDFT 373
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q HG + +G+ + V AL++ Y K +++++F M
Sbjct: 374 LGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLFNEMN 433
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGR 713
++V++ ++ G+++ G E +DL +M + ++ L + AC G V+KGR
Sbjct: 434 VRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVEKGR 492
>ref|XP_006285896.1| hypothetical protein CARUB_v10007408mg [Capsella rubella]
gi|482554601|gb|EOA18794.1| hypothetical protein
CARUB_v10007408mg [Capsella rubella]
Length = 770
Score = 145 bits (367), Expect(2) = 3e-37
Identities = 82/266 (30%), Positives = 151/266 (56%), Gaps = 13/266 (4%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
GK IH ++++G ++ Y+SN L+++Y + G+G ++A +VF M ++ SW ++
Sbjct: 26 GKVIHGFIVRTGLNTDTYISNRLLDLYIECGDG-DYARKVFYGMSLRDVYSWNAFLTFRC 84
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
+ G +++ + P + ++ +N+++S LV +E A ++++M+ GF +FT S
Sbjct: 85 KVGDLEEVCEVFDGMPERDVVSWNNLISVLVRKGLDEEALAVYERMVSDGFLPSRFTLAS 144
Query: 375 ILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWE-AYKVFTMMTQH 542
+L+AC RD FGM+ HG VK+G++++++VG AL+SMY K L + +VF + +
Sbjct: 145 VLSACSKVRDGVFGMKCHGAAVKTGLDKNMFVGNALLSMYAKCGLMMDYGVRVFEFLVET 204
Query: 543 NQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTI------VACGS---LG 695
N V++ V++ G +R LEA ++ R M K ++ LS + C S +
Sbjct: 205 NAVSFTVVISGLARENKVLEAFEMFRSMCQKGIQVDSVCLSNILSISTPREGCDSPSEIF 264
Query: 696 CVDKGRQLHAHALRVGHGLDVGVCNS 773
C G Q+H+ ALR+G D+ + NS
Sbjct: 265 CNVLGTQVHSLALRLGFVGDLHLNNS 290
Score = 37.7 bits (86), Expect(2) = 3e-37
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 760 VFA-IXERDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
VFA + + ++ SWN MI GF Q +K+++ + M D G ++PNE+T+
Sbjct: 307 VFAEMPDVNVVSWNIMIAGFGQEYQSDKSIEYLKRMRDSG-VEPNEVTY 354
Score = 99.4 bits (246), Expect = 2e-18
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 43/290 (14%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGE--GAEFAYRVFVNMPTKNEISWATMISA 188
G Q+H+L ++ GF +L+++NSL+ +Y+K+ + GAE VF MP N +SW MI+
Sbjct: 269 GTQVHSLALRLGFVGDLHLNNSLLEIYAKNKDMHGAEL---VFAEMPDVNVVSWNIMIAG 325
Query: 189 FT-----------------------------------RSGQMQDALNLLKQTPMQSLMVY 263
F RSG ++ + + P S+ +
Sbjct: 326 FGQEYQSDKSIEYLKRMRDSGVEPNEVTYICVLGACFRSGDVEASKRIFSSIPHPSVRAW 385
Query: 264 NSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCSILTACRDPSF---GMQIHGHIVK 434
N+MLSG + + + A F++M K D+ T IL++C F G QIHG ++
Sbjct: 386 NAMLSGYSNYEHYQEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGIAIR 445
Query: 435 SGIERHLWVGTALISMYCKMSLPWEAYKVF-TMMTQHNQVTYIVMLCGFSRNGFQLEALD 611
+ I ++ + + LI++Y + + VF T+ + + M+ G SRN +AL
Sbjct: 446 TKISKNSHIVSGLIAVYSECEKIEISESVFDDCNTELDIACWNSMISGLSRNTLDTKALM 505
Query: 612 LLREMYNKFGVL--NKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLD 755
L + M + GVL N+ + + + +C L + GRQ H H ++ G+ D
Sbjct: 506 LFKRM-QQTGVLFPNETSYAIVLGSCSRLCSLVNGRQFHGHVVKSGYVSD 554
Score = 91.7 bits (226), Expect = 5e-16
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L+ GKQIH + I++ N ++ + L+ +YS+ E E + VF + T+ +I+
Sbjct: 433 LEGGKQIHGIAIRTKISKNSHIVSGLIAVYSEC-EKIEISESVFDDCNTELDIA------ 485
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+NSM+SGL N + A MLF++M + G T
Sbjct: 486 ------------------------CWNSMISGLSRNTLDTKALMLFKRMQQTGVLFPNET 521
Query: 366 -FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMM 533
+ +L +C G Q HGH+VKSG +V AL MYCK A F +
Sbjct: 522 SYAIVLGSCSRLCSLVNGRQFHGHVVKSGYVSDSFVEAALTDMYCKCGEIDSARLFFDTV 581
Query: 534 TQHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGR 713
T+ N V + M+ G++ NG EA+DL REM + + + AC G VD G
Sbjct: 582 TRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGKKPDGITFVSVLTACSHSGLVDTGL 641
Query: 714 QL 719
++
Sbjct: 642 EI 643
>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 748
Score = 146 bits (369), Expect(2) = 3e-37
Identities = 84/247 (34%), Positives = 141/247 (57%), Gaps = 4/247 (1%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G+QIH V+K GF S ++V + LV+MYSK G A +VF +P KN + + T+I
Sbjct: 162 GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM-ISCARKVFDELPEKNVVMYNTLIMGLM 220
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
R G+++D+ L + + + + SM++G N + +A +F++M ++D++TF S
Sbjct: 221 RCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGS 280
Query: 375 ILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+LTAC G Q+H +I+++ + +++V +AL+ MYCK A VF MT N
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKN 340
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGV-LNKFALSRTIVACGSLGCVDKGRQLH 722
V++ ML G+ +NG+ EA+ +M K+G+ + F L I +C +L +++G Q H
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDM-QKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 723 AHALRVG 743
A AL G
Sbjct: 400 ARALTSG 406
Score = 37.0 bits (84), Expect(2) = 3e-37
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
+D +W A++ G+ Q G N+ + LF+ M+ G +KP+++TF
Sbjct: 440 KDEVTWTALVSGYAQFGKANETIGLFESMLAHG-LKPDKVTF 480
Score = 116 bits (291), Expect(2) = 2e-26
Identities = 75/290 (25%), Positives = 142/290 (48%), Gaps = 36/290 (12%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
+ K +H+ +IK+ ++ N+L++ Y+K G +A +VF MP N SW T++SA+
Sbjct: 27 KAKNLHSHIIKTLPYPETFLLNNLISSYAKLGS-IPYACKVFDQMPHPNLYSWNTILSAY 85
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIK--AGFKVDKFT 365
++ G++ + L P + + +NS++SG + + M+K F +++ T
Sbjct: 86 SKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRIT 145
Query: 366 FCSILTACRD---PSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F ++L G QIHGH+VK G +++VG+ L+ MY KM + A KVF +
Sbjct: 146 FSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELP 205
Query: 537 QHNQVTY-------------------------------IVMLCGFSRNGFQLEALDLLRE 623
+ N V Y M+ GF++NG +A+D+ RE
Sbjct: 206 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFRE 265
Query: 624 MYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLDVGVCNS 773
M + ++++ + ACG + + +G+Q+HA+ +R + ++ V ++
Sbjct: 266 MKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASA 315
Score = 30.8 bits (68), Expect(2) = 2e-26
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
+++ SW AM++G+ Q+G +A++ F M G I+P++ T
Sbjct: 339 KNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG-IEPDDFT 378
Score = 94.7 bits (234), Expect = 6e-17
Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L +GKQ+HA +I++ + N++V+++LV+MY K + + A VF M KN +SW M+
Sbjct: 291 LQEGKQVHAYIIRTDYKDNIFVASALVDMYCK-CKNIKSAEAVFKKMTCKNVVSWTAMLV 349
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G ++A+ F M K G + D FT
Sbjct: 350 GYGQNGYSEEAVK-------------------------------TFSDMQKYGIEPDDFT 378
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q H + SG+ + V AL+++Y K +++++F ++
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++VT+ ++ G+++ G E + L M +K + AC G V+KG Q
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQ 498
Query: 717 L 719
+
Sbjct: 499 I 499
>gb|EOY01550.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 800
Score = 141 bits (356), Expect(2) = 1e-36
Identities = 81/249 (32%), Positives = 137/249 (55%), Gaps = 3/249 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+D G QIH ++K GFGS ++V L++MYSK G + A +VF P +N + + TMI+
Sbjct: 211 VDLGPQIHGQIVKFGFGSYVFVGCPLMDMYSKGGLIHD-AKQVFEETPQRNVVMYNTMIT 269
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
R G ++D+ L + + + +M++GL N A LF++M G +D+FT
Sbjct: 270 GLLRCGMVEDSRWLFHSMKEKDSISWTTMITGLTQNGLYREAINLFREMRIEGLAMDQFT 329
Query: 366 FCSILTACRDP---SFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F S+LTAC G Q+H ++++ + +++VG+AL+ MYCK A VF MT
Sbjct: 330 FGSMLTACGGLLALEEGKQVHAFVIRTNQKDNVFVGSALVDMYCKCKSITSAETVFKKMT 389
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
N V++ +L G+ +NG+ EA+ + +M + + L I +C +L +++G Q
Sbjct: 390 HKNVVSWTALLVGYGQNGYSEEAIRIFCDMQRNGINPDYYTLGSVISSCANLASLEEGAQ 449
Query: 717 LHAHALRVG 743
H+ A+ G
Sbjct: 450 FHSQAIVSG 458
Score = 40.0 bits (92), Expect(2) = 1e-36
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
RD SW A++ G+ Q G N+ + LFQ M+ G +KP+ +TF
Sbjct: 492 RDEVSWTALVSGYAQFGKANETIDLFQRMLAHG-LKPDGVTF 532
Score = 112 bits (281), Expect = 2e-22
Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 37/279 (13%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
Q K+IH ++K+ ++ N+LVN YSK G+ +A VF + N SW T++ +
Sbjct: 80 QAKRIHCHILKTFKDPETFLLNNLVNAYSKLGD-LTYARYVFDRILRPNLFSWNTILFTY 138
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGF-KVDKFTF 368
+++G + D + + P + + +NS++SG A + M++ G +++ TF
Sbjct: 139 SKAGNLSDMDYIFNRMPKRDGVSWNSLISGYASRGMVTEAVKGYNSMLRDGVANLNRITF 198
Query: 369 CSIL-----TACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMM 533
++L C D G QIHG IVK G +++VG L+ MY K L +A +VF
Sbjct: 199 STMLILSSSQGCVD--LGPQIHGQIVKFGFGSYVFVGCPLMDMYSKGGLIHDAKQVFEET 256
Query: 534 TQHNQVTY-------------------------------IVMLCGFSRNGFQLEALDLLR 620
Q N V Y M+ G ++NG EA++L R
Sbjct: 257 PQRNVVMYNTMITGLLRCGMVEDSRWLFHSMKEKDSISWTTMITGLTQNGLYREAINLFR 316
Query: 621 EMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALR 737
EM + +++F + ACG L +++G+Q+HA +R
Sbjct: 317 EMRIEGLAMDQFTFGSMLTACGGLLALEEGKQVHAFVIR 355
Score = 86.7 bits (213), Expect = 2e-14
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 3/240 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L++GKQ+HA VI++ N++V ++LV+MY K + A VF M KN +SW ++
Sbjct: 343 LEEGKQVHAFVIRTNQKDNVFVGSALVDMYCKC-KSITSAETVFKKMTHKNVVSWTALLV 401
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G E A +F M + G D +T
Sbjct: 402 GYGQNGY-------------------------------SEEAIRIFCDMQRNGINPDYYT 430
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q H + SG+ + V AL+++Y K +A ++F M
Sbjct: 431 LGSVISSCANLASLEEGAQFHSQAIVSGLFSYTTVSNALVTLYGKCGSIEDANRLFNEMN 490
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ ++ G+++ G E +DL + M + + AC G V+KG Q
Sbjct: 491 FRDEVSWTALVSGYAQFGKANETIDLFQRMLAHGLKPDGVTFVGVLSACSRAGIVEKGYQ 550
>gb|ESW10304.1| hypothetical protein PHAVU_009G197900g [Phaseolus vulgaris]
Length = 747
Score = 143 bits (361), Expect(2) = 1e-36
Identities = 84/247 (34%), Positives = 140/247 (56%), Gaps = 4/247 (1%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G+QIH V+K GF S ++V + LV+MYSK G A +VF MP KN + + T+I+
Sbjct: 161 GRQIHGHVVKFGFQSYVFVGSPLVDMYSKTGL-IFCARQVFDEMPQKNVVMYNTLIAGLM 219
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
R G+++D+ L + + + + +M++G N + A L + M +D++TF S
Sbjct: 220 RCGRIEDSRQLFYEMREKDSISWTAMIAGFTQNGFDLEAIDLLRDMRLENLDMDQYTFGS 279
Query: 375 ILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+LTAC + G Q+H +I+++ + +++VG+AL+ MYCK A VF MT N
Sbjct: 280 VLTACGGVAALQEGKQVHAYIIRTDYQNNIFVGSALVDMYCKCKSIKSAESVFRKMTCKN 339
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGV-LNKFALSRTIVACGSLGCVDKGRQLH 722
V++ ML G+ +NG+ EA+ + +M K+G+ + F L I +C +L +++G Q H
Sbjct: 340 VVSWTAMLVGYGQNGYCEEAVKIFCDM-QKYGIEPDDFTLGSVISSCANLASLEEGAQFH 398
Query: 723 AHALRVG 743
AL G
Sbjct: 399 GRALVSG 405
Score = 37.7 bits (86), Expect(2) = 1e-36
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 781 DIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
D SW A++ G+ Q G N+ L LF+ M+ G KP+++TF
Sbjct: 440 DEVSWTALVSGYAQFGKANETLTLFERMLAHG-FKPDKVTF 479
Score = 134 bits (336), Expect(2) = 1e-31
Identities = 78/278 (28%), Positives = 143/278 (51%), Gaps = 35/278 (12%)
Frame = +3
Query: 18 KQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFTR 197
K++H +IK+ ++ N+LVN Y+K G +A RVF MP +N SW T++S++++
Sbjct: 29 KKVHCNIIKAFQNPETFLLNNLVNAYAKLGS-IIYARRVFDQMPQRNLYSWNTLLSSYSK 87
Query: 198 SGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAG-FKVDKFTFCS 374
G++ + + P + ++ +NS++SG + + M+ G F + + + +
Sbjct: 88 LGRLPEMKRVFDAMPARDMVSWNSLISGYASRGFLVQSVKAYNMMLYDGLFNLTRISLST 147
Query: 375 ILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+L + ++ G QIHGH+VK G + +++VG+ L+ MY K L + A +VF M Q N
Sbjct: 148 MLILASNQNYVCLGRQIHGHVVKFGFQSYVFVGSPLVDMYSKTGLIFCARQVFDEMPQKN 207
Query: 546 QVTY-------------------------------IVMLCGFSRNGFQLEALDLLREMYN 632
V Y M+ GF++NGF LEA+DLLR+M
Sbjct: 208 VVMYNTLIAGLMRCGRIEDSRQLFYEMREKDSISWTAMIAGFTQNGFDLEAIDLLRDMRL 267
Query: 633 KFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGH 746
+ ++++ + ACG + + +G+Q+HA+ +R +
Sbjct: 268 ENLDMDQYTFGSVLTACGGVAALQEGKQVHAYIIRTDY 305
Score = 30.8 bits (68), Expect(2) = 1e-31
Identities = 14/41 (34%), Positives = 28/41 (68%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
+++ SW AM++G+ Q+G +A+++F M G I+P++ T
Sbjct: 338 KNVVSWTAMLVGYGQNGYCEEAVKIFCDMQKYG-IEPDDFT 377
Score = 96.3 bits (238), Expect = 2e-17
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 3/241 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L +GKQ+HA +I++ + +N++V ++LV+MY K + + A VF M KN +SW M+
Sbjct: 290 LQEGKQVHAYIIRTDYQNNIFVGSALVDMYCKC-KSIKSAESVFRKMTCKNVVSWTAMLV 348
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G ++A+ + F M K G + D FT
Sbjct: 349 GYGQNGYCEEAVKI-------------------------------FCDMQKYGIEPDDFT 377
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q HG + SG+ + V AL+++Y K +++++F+ M
Sbjct: 378 LGSVISSCANLASLEEGAQFHGRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMI 437
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ ++ G+++ G E L L M +K + AC G V+KG Q
Sbjct: 438 FVDEVSWTALVSGYAQFGKANETLTLFERMLAHGFKPDKVTFIGVLSACSRAGLVEKGNQ 497
Query: 717 L 719
+
Sbjct: 498 I 498
>ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g20770 gi|332658959|gb|AEE84359.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 774
Score = 144 bits (364), Expect(2) = 2e-36
Identities = 85/266 (31%), Positives = 151/266 (56%), Gaps = 13/266 (4%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
GK IH +++ G S+ Y+ N L+++Y + G+G ++A +VF M ++ SW ++
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDG-DYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
+ G + +A + P + ++ +N+M+S LV EE A +++++M+ GF +FT S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 375 ILTACR---DPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWE-AYKVFTMMTQH 542
+L+AC D FGM+ HG VK+G++++++VG AL+SMY K + +VF ++Q
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 543 NQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTI------VACGSLGCV- 701
N+V+Y ++ G +R LEA+ + R M K ++ LS + C SL +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 702 --DKGRQLHAHALRVGHGLDVGVCNS 773
+ G+Q+H ALR+G G D+ + NS
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNS 289
Score = 35.8 bits (81), Expect(2) = 2e-36
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 760 VFA-IXERDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
+FA + E ++ SWN MI+GF Q +K+++ M D G +PNE+T
Sbjct: 306 IFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG-FQPNEVT 352
Score = 100 bits (250), Expect = 8e-19
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 43/290 (14%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGE--GAEFAYRVFVNMPTKNEISWATMISA 188
GKQIH L ++ GFG +L+++NSL+ +Y+K+ + GAE +F MP N +SW MI
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAEL---IFAEMPEVNVVSWNIMIVG 324
Query: 189 FT-----------------------------------RSGQMQDALNLLKQTPMQSLMVY 263
F RSG ++ + P S+ +
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAW 384
Query: 264 NSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCSILTACRDPSF---GMQIHGHIVK 434
N+MLSG + + E A F++M K DK T IL++C F G QIHG +++
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 435 SGIERHLWVGTALISMYCKMSLPWEAYKVF-TMMTQHNQVTYIVMLCGFSRNGFQLEALD 611
+ I ++ + + LI++Y + + +F + + + + M+ GF N +AL
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 612 LLREMYNKFGVL--NKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLD 755
L R M+ + VL N+ + + + +C L + GRQ H ++ G+ D
Sbjct: 505 LFRRMH-QTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD 553
Score = 87.0 bits (214), Expect = 1e-14
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 4/254 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L+ GKQIH +VI++ N ++ + L+ +YS+ E E + +F
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC-EKMEISECIF---------------- 474
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
D +N L + +NSM+SG HN + A +LF++M + T
Sbjct: 475 --------DDCINEL------DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 366 -FCSILTACR---DPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMM 533
F ++L++C G Q HG +VKSG +V TAL MYCK A + F +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 534 TQHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGR 713
+ N V + M+ G+ NG EA+ L R+M + + + AC G V+ G
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGL 640
Query: 714 QLHAHALRVGHGLD 755
++ + R+ HG++
Sbjct: 641 EILSSMQRI-HGIE 653
Score = 77.0 bits (188), Expect = 1e-11
Identities = 52/235 (22%), Positives = 104/235 (44%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G + H + +K+G N++V N+L++MY+K G ++ RVF ++ NE+S+ +I
Sbjct: 157 GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLA 216
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
R ++ +A+ + + + + V + LS ++ C
Sbjct: 217 RENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG-------------------CD 257
Query: 375 ILTACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHNQVT 554
L+ G QIH ++ G L + +L+ +Y K A +F M + N V+
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 555 YIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQL 719
+ +M+ GF + ++++ L M + N+ + AC G V+ GR++
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 372
>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like isoform X1 [Glycine max]
gi|571497773|ref|XP_006594017.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like isoform X2 [Glycine max]
Length = 747
Score = 141 bits (355), Expect(2) = 4e-36
Identities = 80/246 (32%), Positives = 134/246 (54%), Gaps = 3/246 (1%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G Q+H V+K GF S ++V + LV+MYSK G A + F MP KN + + T+I+
Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGL-VFCARQAFDEMPEKNVVMYNTLIAGLM 219
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
R +++D+ L + + + +M++G N + A LF++M ++D++TF S
Sbjct: 220 RCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGS 279
Query: 375 ILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+LTAC G Q+H +I+++ + +++VG+AL+ MYCK A VF M N
Sbjct: 280 VLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKN 339
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHA 725
V++ ML G+ +NG+ EA+ + +M N + F L I +C +L +++G Q H
Sbjct: 340 VVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHC 399
Query: 726 HALRVG 743
AL G
Sbjct: 400 RALVSG 405
Score = 38.5 bits (88), Expect(2) = 4e-36
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 781 DIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
D SW A++ G+ Q G N+ L+LF+ M+ G KP+++TF
Sbjct: 440 DEVSWTALVSGYAQFGKANETLRLFESMLAHG-FKPDKVTF 479
Score = 115 bits (289), Expect(2) = 7e-27
Identities = 70/278 (25%), Positives = 135/278 (48%), Gaps = 35/278 (12%)
Frame = +3
Query: 18 KQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFTR 197
K+IH +IK+ +++ N+LV+ Y+K + +A RVF MP +N SW T++S++++
Sbjct: 29 KKIHCHIIKAFRNPEIFLLNNLVSAYAKF-DRITYARRVFDQMPQRNLYSWNTLLSSYSK 87
Query: 198 SGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAG-FKVDKFTFCS 374
+ + + P + ++ +NS++S + + M+ G F +++ +
Sbjct: 88 LACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALST 147
Query: 375 ILTACRDPS---FGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+L G+Q+HGH+VK G + +++VG+ L+ MY K L + A + F M + N
Sbjct: 148 MLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKN 207
Query: 546 QVTY-------------------------------IVMLCGFSRNGFQLEALDLLREMYN 632
V Y M+ GF++NG EA+DL REM
Sbjct: 208 VVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRL 267
Query: 633 KFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGH 746
+ ++++ + ACG + + +G+Q+HA+ +R +
Sbjct: 268 ENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 305
Score = 32.7 bits (73), Expect(2) = 7e-27
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
+++ SW AM++G+ Q+G +A+++F M + G I+P++ T
Sbjct: 338 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNG-IEPDDFT 377
Score = 90.5 bits (223), Expect = 1e-15
Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L +GKQ+HA +I++ + N++V ++LV+MY K + + A VF M KN +SW M+
Sbjct: 290 LQEGKQVHAYIIRTDYQDNIFVGSALVDMYCK-CKSIKSAETVFRKMNCKNVVSWTAMLV 348
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G ++A+ +F M G + D FT
Sbjct: 349 GYGQNGYSEEAVK-------------------------------IFCDMQNNGIEPDDFT 377
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q H + SG+ + V AL+++Y K +++++F+ M+
Sbjct: 378 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMS 437
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ ++ G+++ G E L L M +K + AC G V KG Q
Sbjct: 438 YVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQ 497
Query: 717 L 719
+
Sbjct: 498 I 498
>ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Solanum tuberosum]
Length = 746
Score = 144 bits (363), Expect(2) = 4e-36
Identities = 84/245 (34%), Positives = 137/245 (55%), Gaps = 3/245 (1%)
Frame = +3
Query: 18 KQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFTR 197
+QIH ++K GF S ++V + LV+MY+K G E A +VF +P +N + + TMI F R
Sbjct: 161 RQIHGQIVKWGFESYVFVGSPLVDMYAKAGFIYE-AEKVFNELPERNVVMYNTMIMGFLR 219
Query: 198 SGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCSI 377
SG ++++ +L + P + + + +M++GL N + A +LF++M G +D+FTF SI
Sbjct: 220 SGMVRESKSLFQDMPERDSISWTTMITGLTQNGLDREALVLFRRMRLEGLPIDQFTFGSI 279
Query: 378 LTACRD---PSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHNQ 548
LTAC G Q+H +IV++ +++VG+AL+ MY K A F M N
Sbjct: 280 LTACGGLWAIEEGKQLHAYIVRTYHSENVFVGSALVDMYSKCRNIKYAETSFCRMPNKNI 339
Query: 549 VTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAH 728
V++ M+ G+ +NGF EA+ +M + F L I +C +L +++G Q H
Sbjct: 340 VSWTAMVVGYGQNGFSEEAVKAFCDMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHGR 399
Query: 729 ALRVG 743
AL G
Sbjct: 400 ALVSG 404
Score = 35.4 bits (80), Expect(2) = 4e-36
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
+D SW A++ G+ Q G + + LF+ M++ G ++P+ +TF
Sbjct: 438 KDEVSWTALVSGYAQFGKATETIHLFEKMLEHG-LQPDGVTF 478
Score = 130 bits (326), Expect(2) = 1e-30
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 35/287 (12%)
Frame = +3
Query: 9 DQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISA 188
+Q K++H ++K+ ++ N+L+N YSK +A +VF +P N+ SW T++S
Sbjct: 25 NQIKKLHCFILKTIANPETFLLNNLINAYSKLNNTG-YARQVFEEIPQPNQFSWNTILSV 83
Query: 189 FTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIK-AGFKVDKFT 365
+++SG + L++ + P + + N ++SG +A ++ M++ G +++ T
Sbjct: 84 YSKSGNLSRMLDVFNRMPKRDGVSCNLIISGYASRGLAIDALEAYKLMLEDGGMSLNRIT 143
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F ++L D + QIHG IVK G E +++VG+ L+ MY K +EA KVF +
Sbjct: 144 FSTMLILSSDNGWIRMSRQIHGQIVKWGFESYVFVGSPLVDMYAKAGFIYEAEKVFNELP 203
Query: 537 QHNQVTYIVMLCGFSR-------------------------------NGFQLEALDLLRE 623
+ N V Y M+ GF R NG EAL L R
Sbjct: 204 ERNVVMYNTMIMGFLRSGMVRESKSLFQDMPERDSISWTTMITGLTQNGLDREALVLFRR 263
Query: 624 MYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLDVGV 764
M + +++F + ACG L +++G+QLHA+ +R H +V V
Sbjct: 264 MRLEGLPIDQFTFGSILTACGGLWAIEEGKQLHAYIVRTYHSENVFV 310
Score = 31.2 bits (69), Expect(2) = 1e-30
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
++I SW AM++G+ Q+G +A++ F M G ++P++ T
Sbjct: 337 KNIVSWTAMVVGYGQNGFSEEAVKAFCDMQRNG-VEPDDFT 376
Score = 92.4 bits (228), Expect = 3e-16
Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 3/252 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+++GKQ+HA ++++ N++V ++LV+MYSK ++A F MP KN +SW M+
Sbjct: 289 IEEGKQLHAYIVRTYHSENVFVGSALVDMYSKC-RNIKYAETSFCRMPNKNIVSWTAMVV 347
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G E A F M + G + D FT
Sbjct: 348 GYGQNGF-------------------------------SEEAVKAFCDMQRNGVEPDDFT 376
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q HG + SG+ + V AL+++Y K ++++F M+
Sbjct: 377 LGSVISSCANLASLEEGAQFHGRALVSGLISFITVSNALVTLYGKCGSIEVSHRLFDEMS 436
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ ++ G+++ G E + L +M + + AC G VDKG+
Sbjct: 437 VKDEVSWTALVSGYAQFGKATETIHLFEKMLEHGLQPDGVTFVGVLSACSRAGLVDKGK- 495
Query: 717 LHAHALRVGHGL 752
++ ++ HG+
Sbjct: 496 VYFESMVKEHGI 507
>ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|566152696|ref|XP_006369868.1| hypothetical protein
POPTR_0001s34330g [Populus trichocarpa]
gi|550348837|gb|ERP66437.1| hypothetical protein
POPTR_0001s34330g [Populus trichocarpa]
Length = 675
Score = 132 bits (331), Expect(2) = 1e-35
Identities = 72/241 (29%), Positives = 132/241 (54%), Gaps = 3/241 (1%)
Frame = +3
Query: 60 NLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFTRSGQMQDALNLLKQT 239
N+ ++VN Y K G E A R+F++M K+ +W M+ + +G++++ + L ++
Sbjct: 104 NVISWTTMVNGYLKFGR-VELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEM 162
Query: 240 PMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCSILTACRDP---SFGM 410
P++ ++ + SM+ GL N + E A +F+KM+++G + TF +L+AC + + G+
Sbjct: 163 PVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGV 222
Query: 411 QIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHNQVTYIVMLCGFSRNG 590
Q+HGH+VK G H ++ +LI+ Y A+K+F N V + +L + N
Sbjct: 223 QVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNN 282
Query: 591 FQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLDVGVCN 770
+AL + +M + N+ S T+ AC L +DKG+++H A+++G DV V N
Sbjct: 283 KHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGN 342
Query: 771 S 773
S
Sbjct: 343 S 343
Score = 46.2 bits (108), Expect(2) = 1e-35
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +1
Query: 769 IXERDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITFRALQPA 921
I E+DI SWN++I+G QHG AL F MI G + PNEITF L A
Sbjct: 364 INEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRG-VDPNEITFTGLLSA 413
Score = 77.0 bits (188), Expect = 1e-11
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 3/240 (1%)
Frame = +3
Query: 3 QLDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMI 182
+ + G Q+H V+K G + ++S SL+ Y+ + E A+++F TKN + W ++
Sbjct: 217 EFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMK-IEHAHKIFNETLTKNVVKWTALL 275
Query: 183 SAFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKF 362
+A+ V N + ++A +F M K G ++
Sbjct: 276 TAY-------------------------------VWNNKHQDALRVFGDMTKMGALPNQS 304
Query: 363 TFCSILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMM 533
TF L AC G +IH +K G+E ++VG +L+ MY + A VF +
Sbjct: 305 TFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNI 364
Query: 534 TQHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGR 713
+ + V++ ++ G +++GF L AL +M + N+ + + AC G + KGR
Sbjct: 365 NEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGR 424
>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 140 bits (353), Expect(2) = 1e-35
Identities = 86/259 (33%), Positives = 141/259 (54%), Gaps = 3/259 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+D G+QIH + K G+ S L+V + LV+MY+K G + A R+F +P KN + + TMI+
Sbjct: 154 VDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIND-ANRIFEEIPEKNIVVYNTMIT 212
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
R + +A L P + + + ++++GL N + A F++M GF +D+FT
Sbjct: 213 GLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFT 272
Query: 366 FCSILTACRD---PSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F S+LTAC G QIH +I+++ + +++VG+AL+ MYCK A VF M
Sbjct: 273 FGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMR 332
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
N +++ ML G+ +NG+ EA+ + +M + F L I +C +L +++G Q
Sbjct: 333 HKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQ 392
Query: 717 LHAHALRVGHGLDVGVCNS 773
H AL G V V N+
Sbjct: 393 FHGQALASGLICFVTVSNA 411
Score = 37.4 bits (85), Expect(2) = 1e-35
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
RD SW A++ G+ Q G N+ + LF+ M+ G I P+ +TF
Sbjct: 435 RDEVSWTALVSGYAQFGKANETISLFETMLAHG-IVPDGVTF 475
Score = 123 bits (309), Expect = 1e-25
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 35/280 (12%)
Frame = +3
Query: 12 QGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF 191
Q K++H +I++ ++ N+L+N Y K G+ + A VF ++P N SW T++SA+
Sbjct: 23 QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGD-LKNARNVFDHIPQPNLFSWNTLLSAY 81
Query: 192 TRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAG-FKVDKFTF 368
++ G +QD + P ++ +NS+LSG N + ++ M+K G +++ TF
Sbjct: 82 SKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITF 141
Query: 369 CSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQ 539
++L + F G QIHG I K G + +L+VG+ L+ MY K +A ++F + +
Sbjct: 142 STMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPE 201
Query: 540 HNQVTYIVMLCGFSR-------------------------------NGFQLEALDLLREM 626
N V Y M+ G R NG EA+D +EM
Sbjct: 202 KNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEM 261
Query: 627 YNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGH 746
+ +++F + ACG +D+G+Q+HA+ +R +
Sbjct: 262 GIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Score = 89.0 bits (219), Expect = 3e-15
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
LD+GKQIHA +I++ + N++V ++L++MY K ++A VF M KN ISW M+
Sbjct: 286 LDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKC-RNVKYAEAVFRKMRHKNVISWTAMLV 344
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G E A +F M + D FT
Sbjct: 345 GYGQNGY-------------------------------SEEAVRIFCDMQRNEIHPDDFT 373
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
S++++C + + G Q HG + SG+ + V ALI++Y K A+++F M
Sbjct: 374 LGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMK 433
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKG 710
++V++ ++ G+++ G E + L M V + + AC G V+KG
Sbjct: 434 IRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKG 491
>gb|EXB59779.1| hypothetical protein L484_010890 [Morus notabilis]
Length = 775
Score = 145 bits (365), Expect(2) = 2e-35
Identities = 85/270 (31%), Positives = 146/270 (54%), Gaps = 17/270 (6%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
GK IHA + ++G N ++SN L+ +YSK A +A+ F +P K+ SW ++ A
Sbjct: 24 GKLIHAYIFRNGLIFNTFLSNRLIELYSKCSNIA-YAHHTFDKIPKKDVFSWNAILGAHC 82
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
++G +QDA L + P ++++ +N+++S LV N E NA ++ MI GF +FT S
Sbjct: 83 KAGNLQDAHELFVKMPDRNIVSWNNVISALVRNGLERNALDVYDSMILEGFMPTRFTLAS 142
Query: 375 ILTAC---RDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+ +AC D G + HG ++K G+E++ +V AL+SMY K L +A +VF M++ N
Sbjct: 143 VFSACGALLDVERGQRCHGLVLKIGLEKNKYVSNALLSMYAKCGLISDAVQVFDDMSEPN 202
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVD------- 704
+VT+ ++ G ++ L+AL L R M K ++ +LS + C G +
Sbjct: 203 EVTFTALMSGLAQTDRVLKALQLFRMMLRKGIHIDSVSLSSIMGVCARGGSKEFSVFDQH 262
Query: 705 -------KGRQLHAHALRVGHGLDVGVCNS 773
G+Q+H +++G D+ + NS
Sbjct: 263 DAFCSNMSGKQVHCLTIKLGFEEDLHLNNS 292
Score = 32.3 bits (72), Expect(2) = 2e-35
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 781 DIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
++ SWN MI G+ Q KAL+ Q M G +P+E+T+
Sbjct: 317 NVVSWNVMIAGYGQTYQTRKALECVQRMCQLG-FEPDEVTY 356
Score = 113 bits (282), Expect(2) = 2e-27
Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 38/291 (13%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAF- 191
GKQ+H L IK GF +L+++NSL++MY+K+G+ +VF N+P N +SW MI+ +
Sbjct: 271 GKQVHCLTIKLGFEEDLHLNNSLLDMYAKNGD-INATEKVFANLPLANVVSWNVMIAGYG 329
Query: 192 ----------------------------------TRSGQMQDALNLLKQTPMQSLMVYNS 269
+SG ++ + S+ +N+
Sbjct: 330 QTYQTRKALECVQRMCQLGFEPDEVTYINMLAACIKSGDIETGRQMFDSMSFPSVSSWNA 389
Query: 270 MLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCSILTACRDPSF---GMQIHGHIVKSG 440
MLSG + ++A LF++M D+ T L++C F G QIH +K+
Sbjct: 390 MLSGYFQSGNHKDAVKLFREMQFQNVLPDRTTLTIALSSCAGMGFLEAGKQIHAASIKAQ 449
Query: 441 IERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHNQVTYIVMLCGFSRNGFQLEALDLLR 620
++V + LI Y K A ++F M + V + ++ GFS N EA DL +
Sbjct: 450 FHSDIYVASGLIGTYSKCGKTELAERIFYKMPLLDIVCWNSIIAGFSLNSQDKEAFDLFK 509
Query: 621 EMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLDVGVCNS 773
+M +F+ S + C L +G+Q+HA + G+ D+ V +S
Sbjct: 510 KMRQHGMFPTQFSYSTVLSCCAKLSSSFQGKQVHALITKDGYTNDIFVGSS 560
Score = 37.4 bits (85), Expect(2) = 2e-27
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITFRALQPA 921
++ +WN MI G+ Q+G ++A+ L++ MI G+ KP+ ITF A+ A
Sbjct: 584 KNTVTWNEMIHGYAQNGCGDEAVSLYKEMIASGE-KPDGITFVAVLTA 630
Score = 108 bits (269), Expect = 5e-21
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L+ GKQIHA IK+ F S++YV++ L+ YSK G+ E A R+F M
Sbjct: 435 LEAGKQIHAASIKAQFHSDIYVASGLIGTYSKCGK-TELAERIFYKM------------- 480
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
P+ ++ +NS+++G N +++ A LF+KM + G +F+
Sbjct: 481 ------------------PLLDIVCWNSIIAGFSLNSQDKEAFDLFKKMRQHGMFPTQFS 522
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
+ ++L+ C S G Q+H I K G ++VG++LI M CK EA + F M
Sbjct: 523 YSTVLSCCAKLSSSFQGKQVHALITKDGYTNDIFVGSSLIDMNCKCGNIDEARQFFNTMA 582
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
N VT+ M+ G+++NG EA+ L +EM + + AC G D G +
Sbjct: 583 TKNTVTWNEMIHGYAQNGCGDEAVSLYKEMIASGEKPDGITFVAVLTACSHSGLTDVGIE 642
Query: 717 LHAHALRVGHGLD 755
+ ++ HG++
Sbjct: 643 IF-DSMEQEHGVE 654
Score = 80.9 bits (198), Expect(2) = 3e-15
Identities = 61/238 (25%), Positives = 115/238 (48%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+++G++ H LV+K G N YVSN+L++MY+K G ++ A +VF +M NE+++ ++S
Sbjct: 153 VERGQRCHGLVLKIGLEKNKYVSNALLSMYAKCGLISD-AVQVFDDMSEPNEVTFTALMS 211
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
++ ++ AL L + + + + + LS ++ C + F
Sbjct: 212 GLAQTDRVLKALQLFRMMLRKGIHIDSVSLSSIM------GVCARGGSKEFSVFD-QHDA 264
Query: 366 FCSILTACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
FCS ++ G Q+H +K G E L + +L+ MY K KVF + N
Sbjct: 265 FCSNMS-------GKQVHCLTIKLGFEEDLHLNNSLLDMYAKNGDINATEKVFANLPLAN 317
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQL 719
V++ VM+ G+ + +AL+ ++ M ++ + AC G ++ GRQ+
Sbjct: 318 VVSWNVMIAGYGQTYQTRKALECVQRMCQLGFEPDEVTYINMLAACIKSGDIETGRQM 375
Score = 28.9 bits (63), Expect(2) = 3e-15
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 784 IFSWNAMILGFVQHGMMNKALQLFQLM 864
+ SWNAM+ G+ Q G A++LF+ M
Sbjct: 384 VSSWNAMLSGYFQSGNHKDAVKLFREM 410
>ref|XP_004509764.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like isoform X1 [Cicer arietinum]
gi|502154626|ref|XP_004509765.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like isoform X2 [Cicer arietinum]
Length = 744
Score = 141 bits (355), Expect(2) = 3e-35
Identities = 84/247 (34%), Positives = 137/247 (55%), Gaps = 4/247 (1%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
G+QIH V+K GF S +++ + LV+MYSK G A + F MP K+ + + T+I+
Sbjct: 158 GRQIHGHVVKFGFQSYVFLGSPLVDMYSKTGL-ISCARQAFDEMPEKSVVMYNTLINGLM 216
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
R G+++D+ L + + + SM++G N + A LF+ M ++D++TF S
Sbjct: 217 RCGRVEDSKRLFFDMRERDSISWTSMITGFTQNGLDREAIDLFRNMTLEKLQMDQYTFGS 276
Query: 375 ILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+LTAC G Q+HG+I+ + + +++V +AL+ MYCK A VF MT N
Sbjct: 277 VLTACGAVMALQEGKQVHGYIITTDYKDNIFVASALVDMYCKCKNVKSAETVFKKMTCKN 336
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGV-LNKFALSRTIVACGSLGCVDKGRQLH 722
V++ ML G+ +NG+ EA+ +M K+GV + F I +C +L +++G Q H
Sbjct: 337 VVSWTAMLVGYGQNGYSEEAVKTFCDM-QKYGVEPDDFTFGSVISSCANLASLEEGAQFH 395
Query: 723 AHALRVG 743
A AL G
Sbjct: 396 ARALISG 402
Score = 35.4 bits (80), Expect(2) = 3e-35
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
RD +W A++ G+ + G N+ + LF+ M+ ++KP+++TF
Sbjct: 436 RDEVTWTALVSGYAKFGKANETIGLFESML-AHRLKPDKVTF 476
Score = 109 bits (272), Expect(2) = 1e-24
Identities = 66/290 (22%), Positives = 141/290 (48%), Gaps = 35/290 (12%)
Frame = +3
Query: 9 DQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISA 188
+ K +H+ +IKS ++ N+L++ Y+K G +A RVF +P SW T++SA
Sbjct: 23 NNAKNLHSHIIKSIPNPETFLLNNLISSYAKLGS-ITYARRVFDEIPHPTLYSWNTILSA 81
Query: 189 FTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAG-FKVDKFT 365
+++ G++ + +L P + + +NS++SG + + M+ G + +++ T
Sbjct: 82 YSKLGRVNEMEHLFNSMPTRDGVSWNSLISGYAAYGSILRSVKAYNLMLSEGSYNLNRIT 141
Query: 366 FCSILTACRD---PSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSL------------ 500
F ++ G QIHGH+VK G + ++++G+ L+ MY K L
Sbjct: 142 FSTLFILVSKLGCVQLGRQIHGHVVKFGFQSYVFLGSPLVDMYSKTGLISCARQAFDEMP 201
Query: 501 -------------------PWEAYKVFTMMTQHNQVTYIVMLCGFSRNGFQLEALDLLRE 623
++ ++F M + + +++ M+ GF++NG EA+DL R
Sbjct: 202 EKSVVMYNTLINGLMRCGRVEDSKRLFFDMRERDSISWTSMITGFTQNGLDREAIDLFRN 261
Query: 624 MYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHAHALRVGHGLDVGVCNS 773
M + ++++ + ACG++ + +G+Q+H + + + ++ V ++
Sbjct: 262 MTLEKLQMDQYTFGSVLTACGAVMALQEGKQVHGYIITTDYKDNIFVASA 311
Score = 31.6 bits (70), Expect(2) = 1e-24
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
+++ SW AM++G+ Q+G +A++ F M G ++P++ TF
Sbjct: 335 KNVVSWTAMLVGYGQNGYSEEAVKTFCDMQKYG-VEPDDFTF 375
Score = 96.3 bits (238), Expect = 2e-17
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 3/252 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
L +GKQ+H +I + + N++V+++LV+MY K + + A VF M KN +SW M+
Sbjct: 287 LQEGKQVHGYIITTDYKDNIFVASALVDMYCK-CKNVKSAETVFKKMTCKNVVSWTAMLV 345
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G ++A+ F M K G + D FT
Sbjct: 346 GYGQNGYSEEAVK-------------------------------TFCDMQKYGVEPDDFT 374
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
F S++++C + + G Q H + SG+ + V AL+++Y K +++++F+ M+
Sbjct: 375 FGSVISSCANLASLEEGAQFHARALISGLISFITVSNALVTLYGKCGSVEDSHRLFSEMS 434
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++VT+ ++ G+++ G E + L M +K + AC G V+KG Q
Sbjct: 435 FRDEVTWTALVSGYAKFGKANETIGLFESMLAHRLKPDKVTFIGVLSACSRAGLVEKGNQ 494
Query: 717 LHAHALRVGHGL 752
+ ++ HG+
Sbjct: 495 IFESMIK-EHGI 505
>ref|XP_006391071.1| hypothetical protein EUTSA_v10019713mg [Eutrema salsugineum]
gi|557087505|gb|ESQ28357.1| hypothetical protein
EUTSA_v10019713mg [Eutrema salsugineum]
Length = 743
Score = 141 bits (355), Expect(2) = 3e-35
Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 3/256 (1%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
GKQIH VIK GF S L V + L++MY+K G ++ A +VF + +N + + +++
Sbjct: 158 GKQIHVQVIKRGFESYLLVGSPLLDMYAKAGFISD-AKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
G ++DA L + S+ + +M+ GL N E+ A LF++M G +D++TF S
Sbjct: 217 ACGMIKDAQQLFQGMEKDSVS-WTAMIQGLAQNGLEKEAIELFREMKSEGLTIDQYTFGS 275
Query: 375 ILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+L AC + G QIH I++S ++ H++VG+ALI MYCK A VF M Q N
Sbjct: 276 VLPACGELGAIKEGKQIHASIIRSNLQDHVYVGSALIDMYCKCKCIDYAKTVFDRMKQKN 335
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHA 725
V++ M+ G+ + G EA+ + +M + + L + I AC ++ +++G Q H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANIASLEEGSQFHG 395
Query: 726 HALRVGHGLDVGVCNS 773
A+ G V V NS
Sbjct: 396 KAIISGLVHYVTVSNS 411
Score = 35.4 bits (80), Expect(2) = 3e-35
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEITF 903
RD+ S+ AM+ + Q G +A+ LF M+ G +KP+ +TF
Sbjct: 435 RDVVSYTAMVSAYAQFGKAMEAIHLFDRMVQHG-LKPDGVTF 475
Score = 107 bits (267), Expect(2) = 2e-23
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 34/274 (12%)
Frame = +3
Query: 18 KQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFTR 197
K IH +IK+ + N++V+ Y+K + +A RVF +P N SW ++ A+++
Sbjct: 26 KTIHGHIIKTLSIVETILLNNIVHGYAKT-RNSTYARRVFDEIPKPNPFSWNNLLMAYSQ 84
Query: 198 SGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGF----KVDKFT 365
SG + + ++ P++ + +N ++SG A + M++ G +V T
Sbjct: 85 SGHLSEMERTFERIPIRDGVTWNLLISGYSLTGLVGAAVKAYNTMMRDGSGDLKRVTLMT 144
Query: 366 FCSILTACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+ + G QIH ++K G E +L VG+ L+ MY K +A KVF + N
Sbjct: 145 MLKLSSTNGHVGLGKQIHVQVIKRGFESYLLVGSPLLDMYAKAGFISDAKKVFYGLDDRN 204
Query: 546 QVTY------------------------------IVMLCGFSRNGFQLEALDLLREMYNK 635
V Y M+ G ++NG + EA++L REM ++
Sbjct: 205 TVMYNSLMGGLLACGMIKDAQQLFQGMEKDSVSWTAMIQGLAQNGLEKEAIELFREMKSE 264
Query: 636 FGVLNKFALSRTIVACGSLGCVDKGRQLHAHALR 737
++++ + ACG LG + +G+Q+HA +R
Sbjct: 265 GLTIDQYTFGSVLPACGELGAIKEGKQIHASIIR 298
Score = 30.0 bits (66), Expect(2) = 2e-23
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 775 ERDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
++++ SW AM++G+ Q G +A+++F M G I P+ T
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-IDPDHYT 373
Score = 92.0 bits (227), Expect = 4e-16
Identities = 59/240 (24%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
+ +GKQIHA +I+S ++YV ++L++MY K + ++A VF M KN +SW M+
Sbjct: 286 IKEGKQIHASIIRSNLQDHVYVGSALIDMYCK-CKCIDYAKTVFDRMKQKNVVSWTAMVV 344
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G+ ++A+ +F M ++G D +T
Sbjct: 345 GYGQTGRAEEAVK-------------------------------IFLDMQRSGIDPDHYT 373
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
++AC + + G Q HG + SG+ ++ V +L+++Y K ++ ++F M
Sbjct: 374 LGQAISACANIASLEEGSQFHGKAIISGLVHYVTVSNSLVTLYGKCGDIDDSVRIFNEMN 433
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
+ V+Y M+ +++ G +EA+ L M + + I AC G V+KG++
Sbjct: 434 VRDVVSYTAMVSAYAQFGKAMEAIHLFDRMVQHGLKPDGVTFTGVISACSRAGLVEKGQR 493
>ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333055|gb|EFH63473.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 740
Score = 141 bits (355), Expect(2) = 4e-35
Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 3/256 (1%)
Frame = +3
Query: 15 GKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFT 194
GKQIH VIK GF S L V + L++MYSK G ++ A +VF + +N + + T++
Sbjct: 155 GKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISD-AKKVFYGLDDRNTVMYNTLMGGLL 213
Query: 195 RSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFTFCS 374
G ++DAL L + S+ +++M+ GL N E+ A F++M G K+D++ F S
Sbjct: 214 ACGMIEDALQLFRGMEKDSVS-WSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGS 272
Query: 375 ILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+L AC G QIH I+++ ++ H++VG+ALI MYCK A VF M Q N
Sbjct: 273 VLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 332
Query: 546 QVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQLHA 725
V++ M+ G+ + G EA+ + +M + + L + I AC ++ +++G Q H
Sbjct: 333 VVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHG 392
Query: 726 HALRVGHGLDVGVCNS 773
A+ G + V NS
Sbjct: 393 KAITAGLIHYITVSNS 408
Score = 35.0 bits (79), Expect(2) = 4e-35
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 778 RDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
RD SW AM+ + Q G +A+QLF M+ G +KP+ +T
Sbjct: 432 RDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLG-LKPDGVT 471
Score = 100 bits (249), Expect(3) = 1e-21
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 34/274 (12%)
Frame = +3
Query: 18 KQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMISAFTR 197
K IH +I++ ++ N++V+ Y+ + +A RVF +P N SW ++ A+++
Sbjct: 23 KMIHGNIIRTLPHPETFLHNNIVHAYALI-RSSIYARRVFDGIPQPNLFSWNNLLLAYSK 81
Query: 198 SGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGF----KVDKFT 365
SG + + ++ P + + +N ++ G + A + M+K +V T
Sbjct: 82 SGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMT 141
Query: 366 FCSILTACRDPSFGMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMTQHN 545
+ ++ S G QIHG ++K G E +L VG+ L+ MY K+ +A KVF + N
Sbjct: 142 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRN 201
Query: 546 QVTY------------------------------IVMLCGFSRNGFQLEALDLLREMYNK 635
V Y M+ G ++NG + EA++ REM +
Sbjct: 202 TVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIE 261
Query: 636 FGVLNKFALSRTIVACGSLGCVDKGRQLHAHALR 737
++++ + ACG LG ++ GRQ+HA +R
Sbjct: 262 GLKMDQYPFGSVLPACGGLGAINDGRQIHACIIR 295
Score = 30.0 bits (66), Expect(3) = 1e-21
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 775 ERDIFSWNAMILGFVQHGMMNKALQLFQLMIDGGQIKPNEIT 900
++++ SW AM++G+ Q G +A+++F M G I P+ T
Sbjct: 330 QKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSG-IDPDHYT 370
Score = 20.4 bits (41), Expect(3) = 1e-21
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +2
Query: 752 RCRCLQFXKEIF 787
+C+CL + K +F
Sbjct: 314 KCKCLHYAKTVF 325
Score = 89.0 bits (219), Expect = 3e-15
Identities = 57/240 (23%), Positives = 115/240 (47%), Gaps = 3/240 (1%)
Frame = +3
Query: 6 LDQGKQIHALVIKSGFGSNLYVSNSLVNMYSKHGEGAEFAYRVFVNMPTKNEISWATMIS 185
++ G+QIHA +I++ ++YV ++L++MY K + +A VF M KN +SW M+
Sbjct: 283 INDGRQIHACIIRTNLQDHIYVGSALIDMYCK-CKCLHYAKTVFDRMKQKNVVSWTAMVV 341
Query: 186 AFTRSGQMQDALNLLKQTPMQSLMVYNSMLSGLVHNKEEENACMLFQKMIKAGFKVDKFT 365
+ ++G+ +A+ +F M ++G D +T
Sbjct: 342 GYGQTGRAGEAVK-------------------------------IFLDMQRSGIDPDHYT 370
Query: 366 FCSILTACRDPSF---GMQIHGHIVKSGIERHLWVGTALISMYCKMSLPWEAYKVFTMMT 536
++AC + S G Q HG + +G+ ++ V +L+++Y K ++ ++F M
Sbjct: 371 LGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMN 430
Query: 537 QHNQVTYIVMLCGFSRNGFQLEALDLLREMYNKFGVLNKFALSRTIVACGSLGCVDKGRQ 716
++V++ M+ +++ G +EA+ L +M + L+ I AC G V+KG++
Sbjct: 431 VRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQR 490