BLASTX nr result
ID: Ephedra27_contig00007003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00007003
(1936 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74494.1| hypothetical protein M569_00260, partial [Genlise... 72 1e-20
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 74 2e-20
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 66 3e-19
gb|AGC78943.1| hypothetical protein (mitochondrion) [Vicia faba] 69 6e-14
gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea] 64 2e-12
gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis] 55 2e-10
gb|EXB36957.1| hypothetical protein L484_018333 [Morus notabilis] 73 5e-10
ref|WP_008771518.1| conserved hypothetical protein, partial [Bac... 55 8e-09
ref|WP_003734159.1| hypothetical protein [Listeria monocytogenes... 69 9e-09
ref|WP_006640929.1| conserved hypothetical protein [Brucella pin... 66 5e-08
gb|ETO54462.1| hypothetical protein Y001_00420, partial [Staphyl... 65 1e-07
emb|CAR86710.1| Conserved protein [Lactobacillus rhamnosus GG] g... 64 2e-07
emb|CAR86199.1| Conserved protein [Lactobacillus rhamnosus GG] g... 64 2e-07
ref|WP_002891939.1| hypothetical protein [Streptococcus salivari... 63 4e-07
ref|WP_006574327.1| hypothetical protein [Pseudoflavonifractor c... 61 2e-06
ref|WP_004831788.1| hypothetical protein [Parvimonas micra] gi|1... 60 3e-06
ref|WP_004852911.1| hypothetical protein [Coprococcus eutactus] ... 59 8e-06
ref|WP_004849050.1| hypothetical protein [Coprococcus eutactus] ... 59 8e-06
ref|WP_004853487.1| hypothetical protein [Coprococcus eutactus] ... 59 1e-05
ref|WP_008400663.1| hypothetical protein [Clostridium sp. L2-50]... 59 1e-05
>gb|EPS74494.1| hypothetical protein M569_00260, partial [Genlisea aurea]
Length = 76
Score = 71.6 bits (174), Expect(2) = 1e-20
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +2
Query: 788 GSARCIELNHMLHRLCRPPSIPLSFRIATVIPRRSVKTLAAAP 916
G ARCIELNHMLHRLC PPSIPLSF +ATV+PRRSV ++ AP
Sbjct: 1 GFARCIELNHMLHRLCGPPSIPLSFGLATVLPRRSVSRVSWAP 43
Score = 57.4 bits (137), Expect(2) = 1e-20
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 909 PPHIRLQRNTHRLRHGLPGYLILFAPHALAPQRQ 1010
P R + NTHRLRHGLPGYLILFAPHA APQR+
Sbjct: 43 PDPRRPRANTHRLRHGLPGYLILFAPHAFAPQRR 76
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 73.9 bits (180), Expect(2) = 2e-20
Identities = 41/65 (63%), Positives = 43/65 (66%)
Frame = -3
Query: 860 NSKELTGACTSGGACGLIRYNAQNLTSPGTSVHALLFLRCCAYSSGAAWLS*ARVVRCLV 681
NSKELTGACTSGGACGLIRYNAQNLTS AAWLS ARVVRCLV
Sbjct: 290 NSKELTGACTSGGACGLIRYNAQNLTS-------------------AAWLSSARVVRCLV 330
Query: 680 QSLGQ 666
+S +
Sbjct: 331 KSYNE 335
Score = 54.3 bits (129), Expect(2) = 2e-20
Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -2
Query: 1044 GTP-SEGSYPGPTDAGVPKHGEQTGSDTLVVHAVNDECSAVI 922
GTP ++ + PTDAGV KH E+TG DTLVVHAVNDECS ++
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLV 281
Score = 68.2 bits (165), Expect(2) = 4e-12
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 350 TASEMPEEGGDDVKSAWP*WAGPQHVLQWQCNNPPGISFEQGLKAERMERLAIMVRMGLC 171
TAS++ EEGGDDVKSAWP WAGP N +QG KAER+ + + L
Sbjct: 409 TASDILEEGGDDVKSAWPLWAGPHTCYNGNYNG------KQGCKAERIRKDCLSSDCSLQ 462
Query: 170 Y*IRK*ESQVIAEQHAAVNLVP 105
K ES VIA+QHAAVN+ P
Sbjct: 463 LGNMKLESLVIADQHAAVNMYP 484
Score = 32.0 bits (71), Expect(2) = 4e-12
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 109 YPGPVHTARHTLVFALA 59
YPGPVHTARHTL A
Sbjct: 483 YPGPVHTARHTLGIGFA 499
>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
[Medicago truncatula]
Length = 1116
Score = 66.2 bits (160), Expect(3) = 3e-19
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1
Query: 778 GLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAE 891
GLVRFCALYRIKPHAPPLVQAPVNSFEF C R + +
Sbjct: 853 GLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPETK 890
Score = 55.8 bits (133), Expect(3) = 3e-19
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2
Query: 932 EHSSFTAWTTRVSDPVCSPCFGTPASVG 1015
EHSSFTAWTTRVS+PV SPCF TPASVG
Sbjct: 892 EHSSFTAWTTRVSNPVRSPCFRTPASVG 919
Score = 21.9 bits (45), Expect(3) = 3e-19
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 666 LTKGLNQTSHDT 701
L GL+QTSHDT
Sbjct: 832 LVIGLDQTSHDT 843
>gb|AGC78943.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 135
Score = 69.3 bits (168), Expect(2) = 6e-14
Identities = 41/82 (50%), Positives = 48/82 (58%)
Frame = -3
Query: 350 TASEMPEEGGDDVKSAWP*WAGPQHVLQWQCNNPPGISFEQGLKAERMERLAIMVRMGLC 171
TASE+ EEGGDDVKSAWP WAGP N +QG KAER+ + + L
Sbjct: 7 TASEILEEGGDDVKSAWPLWAGPHTCYNGNYNG------KQGCKAERIRKDCLSSDCSLQ 60
Query: 170 Y*IRK*ESQVIAEQHAAVNLVP 105
K ES VIA+QHAAVN+ P
Sbjct: 61 LGNMKLESLVIADQHAAVNMYP 82
Score = 37.0 bits (84), Expect(2) = 6e-14
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 24/55 (43%)
Frame = -1
Query: 109 YPGPVHTARHTL------------------------VFALAFIHTTVGA*TGVKS 17
YPGPVHTARHTL + + HTTVG+ TGVKS
Sbjct: 81 YPGPVHTARHTLGIGFARSIGPMITHDFCVPLVPQRLLVVLLAHTTVGSSTGVKS 135
>gb|EPS74490.1| hypothetical protein M569_00256 [Genlisea aurea]
Length = 184
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 38/82 (46%), Positives = 47/82 (57%)
Frame = -3
Query: 350 TASEMPEEGGDDVKSAWP*WAGPQHVLQWQCNNPPGISFEQGLKAERMERLAIMVRMGLC 171
TAS++ EEGGD+VKSAWP WAGP N +QG KAER+ + + L
Sbjct: 56 TASDILEEGGDNVKSAWPLWAGPHTCYNGNYNG------KQGCKAERIRKDCLSSDCSLQ 109
Query: 170 Y*IRK*ESQVIAEQHAAVNLVP 105
K +S VIA QHAAVN+ P
Sbjct: 110 LGNMKLKSLVIAHQHAAVNMYP 131
Score = 37.0 bits (84), Expect(2) = 2e-12
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 24/55 (43%)
Frame = -1
Query: 109 YPGPVHTARHTL------------------------VFALAFIHTTVGA*TGVKS 17
YPGPVHTARHTL + + HTTVG+ TGVKS
Sbjct: 130 YPGPVHTARHTLGIGFARSIGPTIAHDFCGTLVPQRLLVVLLAHTTVGSSTGVKS 184
>gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis]
Length = 104
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +1
Query: 784 VRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAEC*NVS 906
VRF A +RIKPHAPPLV+ PVNSFEF C R Q E +VS
Sbjct: 24 VRFLAYHRIKPHAPPLVRTPVNSFEFHRCRRTPQVENFSVS 64
Score = 39.3 bits (90), Expect(2) = 2e-10
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 899 TLAAAPYSITAEHSSFTAWTTRVSDPVCSPCFGTPAS 1009
+L A AE SSFTAWTTRVS+PV SP F S
Sbjct: 64 SLGLACQRTQAEFSSFTAWTTRVSNPVRSPRFRASVS 100
>gb|EXB36957.1| hypothetical protein L484_018333 [Morus notabilis]
Length = 117
Score = 72.8 bits (177), Expect = 5e-10
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2
Query: 897 LTLRLGITVAIRKLKGIDGGLHKRWSMWFNSIQRAEPYQP 778
L LRLG TVA KLKGIDGG HKRWSMWFNSIQRA+PYQP
Sbjct: 37 LRLRLGSTVARPKLKGIDGGPHKRWSMWFNSIQRAKPYQP 76
>ref|WP_008771518.1| conserved hypothetical protein, partial [Bacteroides sp. 2_1_22]
gi|262352348|gb|EEZ01457.1| LOW QUALITY PROTEIN:
hypothetical protein HMPREF0102_04728, partial
[Bacteroides sp. 2_1_22]
Length = 69
Score = 54.7 bits (130), Expect(2) = 8e-09
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +1
Query: 784 VRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAE 891
VRF A +RIKPH PPLV+APVNSFEF C R Q E
Sbjct: 3 VRFLAYHRIKPHVPPLVRAPVNSFEFHRCRRTPQVE 38
Score = 34.3 bits (77), Expect(2) = 8e-09
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 917 YSITAEHSSFTAWTTRVSDPV 979
Y +E+SSFT WTTRVS+PV
Sbjct: 49 YIANSEYSSFTVWTTRVSNPV 69
>ref|WP_003734159.1| hypothetical protein [Listeria monocytogenes]
gi|293592716|gb|EFG00477.1| conserved hypothetical
protein [Listeria monocytogenes J2818]
Length = 68
Score = 68.6 bits (166), Expect = 9e-09
Identities = 37/68 (54%), Positives = 41/68 (60%)
Frame = +1
Query: 691 LTTRAYDSHAAPEEYAQQRRNSKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYC 870
+TT + P + R K C D LVRF AL RIKPHAPPLV+APVNSFEF C
Sbjct: 1 MTTTMHHLSLCPRRESSVSRVVKGCQD---LVRFFALLRIKPHAPPLVRAPVNSFEFQPC 57
Query: 871 YRNTQAEC 894
R QAEC
Sbjct: 58 GRTPQAEC 65
>ref|WP_006640929.1| conserved hypothetical protein [Brucella pinnipedialis]
gi|261302998|gb|EEY06495.1| conserved hypothetical
protein [Brucella pinnipedialis M163/99/10]
Length = 50
Score = 66.2 bits (160), Expect = 5e-08
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = -2
Query: 885 LGITVAIRKLKGIDGGLHKRWSMWFNSIQRAEPYQP 778
+G TVA KLKGIDGG HKRWSMWFNS QRAEPYQP
Sbjct: 1 MGSTVARLKLKGIDGGPHKRWSMWFNSKQRAEPYQP 36
>gb|ETO54462.1| hypothetical protein Y001_00420, partial [Staphylococcus aureus
MUF256]
Length = 71
Score = 65.1 bits (157), Expect = 1e-07
Identities = 35/58 (60%), Positives = 37/58 (63%)
Frame = +1
Query: 721 APEEYAQQRRNSKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAEC 894
+PE R K C D LVRF AL RIKPHAPPLV+ PVNSFEF C R QAEC
Sbjct: 14 SPEGEGSISRVVKGCQD---LVRFFALLRIKPHAPPLVRVPVNSFEFQPCGRTPQAEC 68
>emb|CAR86710.1| Conserved protein [Lactobacillus rhamnosus GG]
gi|257147756|emb|CAR86729.1| Conserved protein
[Lactobacillus rhamnosus GG]
Length = 64
Score = 64.3 bits (155), Expect = 2e-07
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = +1
Query: 757 KACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAEC 894
K C D LVRF AL RIKPHAPPLV+APVNSFEF C R QAEC
Sbjct: 19 KRCQD---LVRFFALLRIKPHAPPLVRAPVNSFEFQPCGRTPQAEC 61
>emb|CAR86199.1| Conserved protein [Lactobacillus rhamnosus GG]
gi|257148812|emb|CAR87785.1| Conserved protein
[Lactobacillus rhamnosus GG]
gi|257149427|emb|CAR88400.1| Conserved protein
[Lactobacillus rhamnosus GG]
gi|257150157|emb|CAR89129.1| Conserved protein
[Lactobacillus rhamnosus Lc 705]
gi|257150676|emb|CAR89648.1| Conserved protein
[Lactobacillus rhamnosus Lc 705]
gi|257150695|emb|CAR89667.1| Conserved protein
[Lactobacillus rhamnosus Lc 705]
gi|257151740|emb|CAR90712.1| Conserved protein
[Lactobacillus rhamnosus Lc 705]
gi|257152377|emb|CAR91349.1| Conserved protein
[Lactobacillus rhamnosus Lc 705]
Length = 64
Score = 64.3 bits (155), Expect = 2e-07
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = +1
Query: 757 KACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAEC 894
K C D LVRF AL RIKPHAPPLV+APVNSFEF C R QAEC
Sbjct: 19 KRCQD---LVRFFALLRIKPHAPPLVRAPVNSFEFQPCGRTPQAEC 61
>ref|WP_002891939.1| hypothetical protein [Streptococcus salivarius]
gi|400181551|gb|EJO15818.1| hypothetical protein
RSSL_02251 [Streptococcus salivarius K12]
Length = 64
Score = 63.2 bits (152), Expect = 4e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +1
Query: 754 SKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAEC 894
+ C D LVRF AL RIKPHAPPLV+APVNSFEF C R QAEC
Sbjct: 18 ASGCQD---LVRFFALLRIKPHAPPLVRAPVNSFEFQPCGRTPQAEC 61
>ref|WP_006574327.1| hypothetical protein [Pseudoflavonifractor capillosus]
gi|150270409|gb|EDM97732.1| hypothetical protein
BACCAP_04475 [Pseudoflavonifractor capillosus ATCC
29799] gi|150271076|gb|EDM98345.1| hypothetical protein
BACCAP_03831 [Pseudoflavonifractor capillosus ATCC
29799]
Length = 40
Score = 61.2 bits (147), Expect = 2e-06
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -2
Query: 885 LGITVAIRKLKGIDGGLHKRWSMWFNSIQRAEPYQ 781
+G T+A KLKGIDGG HKRWSMWFNS QR EPYQ
Sbjct: 1 MGSTIARLKLKGIDGGPHKRWSMWFNSKQREEPYQ 35
>ref|WP_004831788.1| hypothetical protein [Parvimonas micra] gi|158447808|gb|EDP24803.1|
hypothetical protein PEPMIC_00055 [Parvimonas micra ATCC
33270]
Length = 58
Score = 60.5 bits (145), Expect = 3e-06
Identities = 31/48 (64%), Positives = 33/48 (68%)
Frame = +1
Query: 751 NSKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAEC 894
NS C LVRF AL RIKPHAP LV+ PVNSFEF C+R QAEC
Sbjct: 11 NSTICQ---ALVRFFALLRIKPHAPLLVRVPVNSFEFQCCHRTPQAEC 55
>ref|WP_004852911.1| hypothetical protein [Coprococcus eutactus]
gi|158449618|gb|EDP26613.1| hypothetical protein
COPEUT_01244 [Coprococcus eutactus ATCC 27759]
Length = 76
Score = 58.9 bits (141), Expect = 8e-06
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +1
Query: 745 RRNSKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAE 891
++ S C D LVRF AL RIKPHAPPLV+ PVNSFEF C R Q E
Sbjct: 15 KKPSSGCQD---LVRFFALLRIKPHAPPLVRVPVNSFEFHSCERTPQVE 60
>ref|WP_004849050.1| hypothetical protein [Coprococcus eutactus]
gi|158449604|gb|EDP26599.1| hypothetical protein
COPEUT_01255 [Coprococcus eutactus ATCC 27759]
Length = 76
Score = 58.9 bits (141), Expect = 8e-06
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = +1
Query: 745 RRNSKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAE 891
+ S C D LVRF AL RIKPHAPPLV+ PVNSFEF C R Q E
Sbjct: 15 KERSSGCQD---LVRFFALLRIKPHAPPLVRVPVNSFEFHSCERTPQVE 60
>ref|WP_004853487.1| hypothetical protein [Coprococcus eutactus]
gi|158448407|gb|EDP25402.1| hypothetical protein
COPEUT_02396 [Coprococcus eutactus ATCC 27759]
Length = 76
Score = 58.5 bits (140), Expect = 1e-05
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +1
Query: 745 RRNSKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAE 891
++ S C D LVRF AL RIKPHAPPLV+ PVNSFEF C R Q E
Sbjct: 15 KKLSSGCQD---LVRFFALLRIKPHAPPLVRVPVNSFEFHSCERTPQVE 60
>ref|WP_008400663.1| hypothetical protein [Clostridium sp. L2-50]
gi|156862905|gb|EDO56336.1| hypothetical protein
CLOL250_03003 [Clostridium sp. L2-50]
Length = 70
Score = 58.5 bits (140), Expect = 1e-05
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = +1
Query: 745 RRNSKACTDVPGLVRFCALYRIKPHAPPLVQAPVNSFEFPYCYRNTQAE 891
+ S C D LVRF AL RIKPHAPPLV+ PVNSFEF C R Q E
Sbjct: 9 KERSAGCQD---LVRFFALLRIKPHAPPLVRVPVNSFEFHSCERTPQVE 54