BLASTX nr result

ID: Ephedra27_contig00006979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006979
         (969 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [A...    64   9e-08
ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polyme...    60   1e-06
ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [A...    59   2e-06

>ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [Amborella trichopoda]
           gi|548857749|gb|ERN15547.1| hypothetical protein
           AMTR_s00048p00122750 [Amborella trichopoda]
          Length = 607

 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 33/100 (33%), Positives = 51/100 (51%)
 Frame = +3

Query: 663 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 842
           + L P+ +    A    V+++G Q M+   +I+G++ +  S SEQ    N  + +  DN 
Sbjct: 380 IYLRPSRYSHISARSCDVDENGMQHMVLCCVIMGNMEQVQSGSEQFHPGNENFDSGVDNH 439

Query: 843 SNPTCYFLWRESIRARFMPEYVVIFKISPLETEYWAKAQE 962
            NP CY +W   +     PEYVV FK+ P   EY A  +E
Sbjct: 440 ENPKCYIVWNTHMNTHIYPEYVVSFKVPPSAREYLAGIRE 479


>ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform
           X1 [Solanum tuberosum] gi|565391106|ref|XP_006361266.1|
           PREDICTED: inactive poly [ADP-ribose] polymerase
           RCD1-like isoform X2 [Solanum tuberosum]
          Length = 600

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 32/97 (32%), Positives = 50/97 (51%)
 Frame = +3

Query: 639 NNSQPSGPVRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQ 818
           +NS     V LFPA+     A Y+ V+++G Q M+  ++I+G++      S Q    +  
Sbjct: 361 SNSSYGIGVHLFPANCSEISAKYSDVDENGVQYMILCRVIMGNMELVCPGSNQFHPSSED 420

Query: 819 YLTVADNASNPTCYFLWRESIRARFMPEYVVIFKISP 929
           +    D+  NP CY +W  ++     PEYVV FK SP
Sbjct: 421 FDNGVDSVENPKCYVVWTMNMSTHIFPEYVVSFKFSP 457


>ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [Amborella trichopoda]
           gi|548853018|gb|ERN11024.1| hypothetical protein
           AMTR_s00024p00059840 [Amborella trichopoda]
          Length = 733

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 28/95 (29%), Positives = 48/95 (50%)
 Frame = +3

Query: 663 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 842
           + L P       A Y  V+++G Q M+  ++I+G++ +    +EQ    + ++ +  D+ 
Sbjct: 513 IYLSPEDCSYISANYCDVDENGVQHMVLCRIIMGNMEQVQPGAEQFHPSSEKFDSGVDDL 572

Query: 843 SNPTCYFLWRESIRARFMPEYVVIFKISPLETEYW 947
            NP  Y +W   +     PEYVV FK+ P   EYW
Sbjct: 573 QNPKHYIIWSTHMNTHIYPEYVVSFKVPPNIQEYW 607


Top