BLASTX nr result

ID: Ephedra27_contig00006978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006978
         (687 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polyme...    59   2e-06
ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [A...    57   7e-06

>ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform
           X1 [Solanum tuberosum] gi|565391106|ref|XP_006361266.1|
           PREDICTED: inactive poly [ADP-ribose] polymerase
           RCD1-like isoform X2 [Solanum tuberosum]
          Length = 600

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
 Frame = +3

Query: 270 NNSQPSGPVRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQ 449
           +NS     V LFPA+     A Y+ V+++G Q M+  ++I+G++      S Q    +  
Sbjct: 361 SNSSYGIGVHLFPANCSEISAKYSDVDENGVQYMILCRVIMGNMELVCPGSNQFHPSSED 420

Query: 450 YLTVADNASNPTCYFLRRESIRARFMPEYVIIFKISPLETEYWV--KAQEIARTVS---P 614
           +    D+  NP CY +   ++     PEYV+ FK SP    Y V  K+  ++   S   P
Sbjct: 421 FDNGVDSVENPKCYVVWTMNMSTHIFPEYVVSFKFSPDSEGYLVGNKSPNVSAVTSCQGP 480

Query: 615 HDNAPNDKL 641
            D  P D L
Sbjct: 481 VDQLPADTL 489


>ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [Amborella trichopoda]
           gi|548857749|gb|ERN15547.1| hypothetical protein
           AMTR_s00048p00122750 [Amborella trichopoda]
          Length = 607

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 30/100 (30%), Positives = 49/100 (49%)
 Frame = +3

Query: 294 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 473
           + L P+ +    A    V+++G Q M+   +I+G++ +  S SEQ    N  + +  DN 
Sbjct: 380 IYLRPSRYSHISARSCDVDENGMQHMVLCCVIMGNMEQVQSGSEQFHPGNENFDSGVDNH 439

Query: 474 SNPTCYFLRRESIRARFMPEYVIIFKISPLETEYWVKAQE 593
            NP CY +    +     PEYV+ FK+ P   EY    +E
Sbjct: 440 ENPKCYIVWNTHMNTHIYPEYVVSFKVPPSAREYLAGIRE 479


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