BLASTX nr result
ID: Ephedra27_contig00006671
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00006671 (430 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22430.1| unknown [Picea sitchensis] 59 5e-07 gb|ABK23374.1| unknown [Picea sitchensis] 59 7e-07 gb|AFK36721.1| unknown [Medicago truncatula] 56 6e-06 >gb|ABK22430.1| unknown [Picea sitchensis] Length = 181 Score = 59.3 bits (142), Expect = 5e-07 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +2 Query: 92 TNKHHLIPAHVFSATTRR-----PFVTVSAPFSSLGFSKNNNSFVSQKVXXXXXXXXXXX 256 +N + +P+ +FS+ R PFV+ + +L + SFV ++V Sbjct: 8 SNINTRLPSPLFSSARRTLPCPLPFVSSFLNYRALPLTVPQ-SFVLRQVANSRSYGAVG- 65 Query: 257 XXXIPRASFSGGSAKENGVVESINAKINSSPVVVYSKSWCLYCEEVKSLFQDIGVK 424 P + +G S + + ESI +IN +PVVVYSK+WC YC++ K LF+D+GVK Sbjct: 66 ----PIRATAGSSGSQ--IKESIETEINENPVVVYSKTWCPYCQQAKGLFEDLGVK 115 >gb|ABK23374.1| unknown [Picea sitchensis] Length = 181 Score = 58.9 bits (141), Expect = 7e-07 Identities = 26/52 (50%), Positives = 37/52 (71%) Frame = +2 Query: 269 PRASFSGGSAKENGVVESINAKINSSPVVVYSKSWCLYCEEVKSLFQDIGVK 424 P + +G S + + ESI +IN +PVVVYSK+WC YC++ K LF+D+GVK Sbjct: 66 PIRATAGSSGSQ--IKESIETEINENPVVVYSKTWCPYCQQAKGLFEDLGVK 115 >gb|AFK36721.1| unknown [Medicago truncatula] Length = 187 Score = 55.8 bits (133), Expect = 6e-06 Identities = 25/52 (48%), Positives = 36/52 (69%) Frame = +2 Query: 269 PRASFSGGSAKENGVVESINAKINSSPVVVYSKSWCLYCEEVKSLFQDIGVK 424 P +S S S+ + + E+I ++ +PVVVYSKSWC YC EVKSLF+ +G + Sbjct: 68 PSSSSSSSSSFGSRLEETIKNTVSQNPVVVYSKSWCSYCSEVKSLFKKLGTQ 119