BLASTX nr result

ID: Ephedra27_contig00006671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006671
         (430 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22430.1| unknown [Picea sitchensis]                              59   5e-07
gb|ABK23374.1| unknown [Picea sitchensis]                              59   7e-07
gb|AFK36721.1| unknown [Medicago truncatula]                           56   6e-06

>gb|ABK22430.1| unknown [Picea sitchensis]
          Length = 181

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
 Frame = +2

Query: 92  TNKHHLIPAHVFSATTRR-----PFVTVSAPFSSLGFSKNNNSFVSQKVXXXXXXXXXXX 256
           +N +  +P+ +FS+  R      PFV+    + +L  +    SFV ++V           
Sbjct: 8   SNINTRLPSPLFSSARRTLPCPLPFVSSFLNYRALPLTVPQ-SFVLRQVANSRSYGAVG- 65

Query: 257 XXXIPRASFSGGSAKENGVVESINAKINSSPVVVYSKSWCLYCEEVKSLFQDIGVK 424
               P  + +G S  +  + ESI  +IN +PVVVYSK+WC YC++ K LF+D+GVK
Sbjct: 66  ----PIRATAGSSGSQ--IKESIETEINENPVVVYSKTWCPYCQQAKGLFEDLGVK 115


>gb|ABK23374.1| unknown [Picea sitchensis]
          Length = 181

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 269 PRASFSGGSAKENGVVESINAKINSSPVVVYSKSWCLYCEEVKSLFQDIGVK 424
           P  + +G S  +  + ESI  +IN +PVVVYSK+WC YC++ K LF+D+GVK
Sbjct: 66  PIRATAGSSGSQ--IKESIETEINENPVVVYSKTWCPYCQQAKGLFEDLGVK 115


>gb|AFK36721.1| unknown [Medicago truncatula]
          Length = 187

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +2

Query: 269 PRASFSGGSAKENGVVESINAKINSSPVVVYSKSWCLYCEEVKSLFQDIGVK 424
           P +S S  S+  + + E+I   ++ +PVVVYSKSWC YC EVKSLF+ +G +
Sbjct: 68  PSSSSSSSSSFGSRLEETIKNTVSQNPVVVYSKSWCSYCSEVKSLFKKLGTQ 119