BLASTX nr result
ID: Ephedra27_contig00006640
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00006640
(1760 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX95247.1| MUTS isoform 2 [Theobroma cacao] 364 7e-98
gb|EOX95246.1| MUTS isoform 1 [Theobroma cacao] 364 7e-98
ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 352 3e-94
ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-... 352 3e-94
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 351 5e-94
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-... 349 2e-93
dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare] 348 3e-93
emb|CBI36942.3| unnamed protein product [Vitis vinifera] 339 2e-90
ref|NP_192116.1| DNA mismatch repair protein MSH6 [Arabidopsis t... 300 2e-78
gb|EMT09463.1| DNA mismatch repair protein Msh6-1 [Aegilops taus... 299 2e-78
ref|XP_004300462.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 297 1e-77
dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sa... 295 4e-77
ref|XP_006661208.1| PREDICTED: DNA mismatch repair protein MSH6-... 295 6e-77
gb|EMS59893.1| DNA mismatch repair protein Msh6-1 [Triticum urartu] 294 7e-77
ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus ... 294 9e-77
tpg|DAA61384.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea m... 293 1e-76
ref|XP_006286904.1| hypothetical protein CARUB_v10000048mg [Caps... 292 3e-76
gb|EMJ02419.1| hypothetical protein PRUPE_ppa000344mg [Prunus pe... 291 6e-76
ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arab... 291 8e-76
ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-... 290 1e-75
>gb|EOX95247.1| MUTS isoform 2 [Theobroma cacao]
Length = 1118
Score = 364 bits (934), Expect = 7e-98
Identities = 235/572 (41%), Positives = 302/572 (52%), Gaps = 28/572 (4%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPN--PSQNPSNDET--- 1470
QQR I SFFS + PS SP + + L PN PS++PS T
Sbjct: 17 QQRQITSFFS----------KTNSPSPSPTISKQTSKLNPNSKPNRSPSKSPSPSPTTPS 66
Query: 1469 PAQKRARVDSSLVPETPSD--DKPSGIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDEDS 1296
P Q + + ++ +TPS P+ + V KR++VYWP+D+A+YEG V S+D++S
Sbjct: 67 PVQSKLKKPLLVIGQTPSPTPSTPADKSYGKEVVDKRIRVYWPLDKAWYEGVVKSFDKES 126
Query: 1295 GMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSES--------------- 1161
G H V YDD E E L L EK++WI + RRL++ S
Sbjct: 127 GRHLVQYDDAEEEELDLGKEKIEWIKESTG----RLRRLRRGGSSSVFKKVVIDDEDEGV 182
Query: 1160 ----QRESNFEEDKCLPTPQPETPSLEVSKRAEGSD-SLDAGVKEAEVXXXXXXXXXXXX 996
+ ES+ +D + EVS+ AE D L+ G +E E
Sbjct: 183 TENVEPESDDNDDDSSDEDWGKNVEQEVSEDAEVEDMDLEDGEEEEE------------- 229
Query: 995 XXXXGXXXXXXXXXXXXXXXXXXXXXXXXKRKRTQSSRASICKPKAARKVNYDTPKRTME 816
KR S + K KA+ ++ K++
Sbjct: 230 ----------------------ENEEEMKISKRKSSGKTEAKKRKASGGGKLESGKKSKT 267
Query: 815 VSSAKKVKLDVVKDQEMKTVDDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKAN 636
++ K +L V + +K ++ DK+S N
Sbjct: 268 NANVSKQELKVSLVEPVKKIES-----------------------------DKASNGFDN 298
Query: 635 AMQGGDMPNLSGEAAERFGNRLSEKL-LPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLK 459
A L G+A+ERFG R +EKL ++R+DA KRP D +NPKTLYLP +FLK
Sbjct: 299 A--------LVGDASERFGKREAEKLHFLTPKERRDANRKRPEDVNYNPKTLYLPLDFLK 350
Query: 458 SLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEK 279
SLSGGQRQWWEFKS+HMDKVLFFKMGKFYELFEMDAH+GA+ELDLQYMKGEQPHCGFPE+
Sbjct: 351 SLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPER 410
Query: 278 NFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGM 99
NF NVEKLARKGYRVLVVEQTETP+QLE RRKE G+KDKVVKREICAVVTKGT+ EG M
Sbjct: 411 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGAKDKVVKREICAVVTKGTLTEGEM 470
Query: 98 LDMCPDASYMISIAEKGLDSFNSTQSVSIGIC 3
L PD SY++++ E S N + G+C
Sbjct: 471 LSANPDPSYLMAVTECCQSSTNQNEDRIFGVC 502
>gb|EOX95246.1| MUTS isoform 1 [Theobroma cacao]
Length = 1316
Score = 364 bits (934), Expect = 7e-98
Identities = 235/572 (41%), Positives = 302/572 (52%), Gaps = 28/572 (4%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPN--PSQNPSNDET--- 1470
QQR I SFFS + PS SP + + L PN PS++PS T
Sbjct: 17 QQRQITSFFS----------KTNSPSPSPTISKQTSKLNPNSKPNRSPSKSPSPSPTTPS 66
Query: 1469 PAQKRARVDSSLVPETPSD--DKPSGIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDEDS 1296
P Q + + ++ +TPS P+ + V KR++VYWP+D+A+YEG V S+D++S
Sbjct: 67 PVQSKLKKPLLVIGQTPSPTPSTPADKSYGKEVVDKRIRVYWPLDKAWYEGVVKSFDKES 126
Query: 1295 GMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSES--------------- 1161
G H V YDD E E L L EK++WI + RRL++ S
Sbjct: 127 GRHLVQYDDAEEEELDLGKEKIEWIKESTG----RLRRLRRGGSSSVFKKVVIDDEDEGV 182
Query: 1160 ----QRESNFEEDKCLPTPQPETPSLEVSKRAEGSD-SLDAGVKEAEVXXXXXXXXXXXX 996
+ ES+ +D + EVS+ AE D L+ G +E E
Sbjct: 183 TENVEPESDDNDDDSSDEDWGKNVEQEVSEDAEVEDMDLEDGEEEEE------------- 229
Query: 995 XXXXGXXXXXXXXXXXXXXXXXXXXXXXXKRKRTQSSRASICKPKAARKVNYDTPKRTME 816
KR S + K KA+ ++ K++
Sbjct: 230 ----------------------ENEEEMKISKRKSSGKTEAKKRKASGGGKLESGKKSKT 267
Query: 815 VSSAKKVKLDVVKDQEMKTVDDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKAN 636
++ K +L V + +K ++ DK+S N
Sbjct: 268 NANVSKQELKVSLVEPVKKIES-----------------------------DKASNGFDN 298
Query: 635 AMQGGDMPNLSGEAAERFGNRLSEKL-LPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLK 459
A L G+A+ERFG R +EKL ++R+DA KRP D +NPKTLYLP +FLK
Sbjct: 299 A--------LVGDASERFGKREAEKLHFLTPKERRDANRKRPEDVNYNPKTLYLPLDFLK 350
Query: 458 SLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEK 279
SLSGGQRQWWEFKS+HMDKVLFFKMGKFYELFEMDAH+GA+ELDLQYMKGEQPHCGFPE+
Sbjct: 351 SLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPER 410
Query: 278 NFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGM 99
NF NVEKLARKGYRVLVVEQTETP+QLE RRKE G+KDKVVKREICAVVTKGT+ EG M
Sbjct: 411 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGAKDKVVKREICAVVTKGTLTEGEM 470
Query: 98 LDMCPDASYMISIAEKGLDSFNSTQSVSIGIC 3
L PD SY++++ E S N + G+C
Sbjct: 471 LSANPDPSYLMAVTECCQSSTNQNEDRIFGVC 502
>ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum tuberosum]
Length = 1308
Score = 352 bits (903), Expect = 3e-94
Identities = 230/551 (41%), Positives = 297/551 (53%), Gaps = 7/551 (1%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSEN---IRRSSTKPSSSPEYNTKKHLLKIGHLPN--PSQNP-SNDE 1473
QQ I SFFS S + + S+P NTK+ PN PS +P ++
Sbjct: 17 QQSQITSFFSKTLSSPSPSPLLPKQIPEKSNPNPNTKRK-------PNLSPSTSPCASPT 69
Query: 1472 TPAQKRARVDSSLVPETPSDDKPSGIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDEDSG 1293
TP+ A+ ++ D KPS Q V KR+KVYWP+D+ +YEGCV S+D SG
Sbjct: 70 TPSPLNAKRKITVPISAIVDLKPSYGQE---VVDKRVKVYWPLDKIWYEGCVKSFDSSSG 126
Query: 1292 MHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQRESNFEEDKCLPTPQ 1113
H V YDDG+ E + L+ EK++W+ K R+L++L R S+ E+K +
Sbjct: 127 EHLVKYDDGDEEMIDLSEEKIEWV-------KAPVRKLRRL----RRSSVVEEK-----E 170
Query: 1112 PETPSLEVSKRAEG-SDSLDAGVKEAEVXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXX 936
E LE K E S+ D G A+
Sbjct: 171 EEEEKLEDLKSVEDDSEDEDWGKDAAKQVSEGEDASEDMDL------------------- 211
Query: 935 XXXXXXXXXKRKRTQSSRASICKPKAARKVNYDTPKRTMEVSSAKKVKLDVVKDQEMKTV 756
+ + PK+ + R + +K L ++ KTV
Sbjct: 212 ------------EIEEEDDDVVGPKSRKVSGSKVVARKRKTGEGEK--LTPSSSKKSKTV 257
Query: 755 DDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKANAMQGGDMPNLSGEAAERFGN 576
DK + + V V K +T K C KA+ D L G AA+RFG
Sbjct: 258 SDKRSANSK---MDSAVIGVNGKEPVAT----KEDCAKAS---NNDNVLLCG-AADRFGQ 306
Query: 575 RLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWWEFKSQHMDKVL 396
R ++K + +DRKDA + PGD ++P+T+YLP FLK L+GGQRQWWEFKS+HMDKVL
Sbjct: 307 RETQKFPFLGKDRKDANRRSPGDANYDPRTIYLPLNFLKGLTGGQRQWWEFKSKHMDKVL 366
Query: 395 FFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLARKGYRVLVVEQ 216
FFKMGKFYEL+EMDAH+GAQEL LQYMKGEQPHCGFPEKNF NVEKLARKGYRVLVVEQ
Sbjct: 367 FFKMGKFYELYEMDAHIGAQELHLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQ 426
Query: 215 TETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYMISIAEKGLDSF 36
TETP+QLE RR+E GSKDKVV+REICAVVTKGT+ EG ML PDASY++++ E L
Sbjct: 427 TETPEQLENRRREMGSKDKVVRREICAVVTKGTLTEGEMLAANPDASYLMAVTESFLTDA 486
Query: 35 NSTQSVSIGIC 3
+ + G+C
Sbjct: 487 FQQEKRTYGVC 497
>ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
lycopersicum]
Length = 1312
Score = 352 bits (903), Expect = 3e-94
Identities = 220/546 (40%), Positives = 288/546 (52%), Gaps = 2/546 (0%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPS-NDETPAQK 1458
QQ I SFFS S + S P P+ + K +PS +P + TP+
Sbjct: 18 QQSQITSFFSKALSSSSSSPSPLLPKQIPQKSNPNPNTKSKPNLSPSTSPCVSPTTPSPL 77
Query: 1457 RARVDSSLVPETPSDDKPSGIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDEDSGMHSVL 1278
A+ ++ D KPS Q V KR+KVYWP+D+ +YEGCV S+D SG H V
Sbjct: 78 SAKRKITVPISAVVDLKPSYGQE---VVDKRVKVYWPLDKIWYEGCVKSFDSSSGEHLVK 134
Query: 1277 YDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQRESNFEEDKCLPTPQPETPS 1098
YDDG+ E + LA EK++W+ A ++KL +R S EE+ + E
Sbjct: 135 YDDGDEEMIDLAEEKIEWVKAP----------VRKLRRLRRSSVVEEE------EEEEEK 178
Query: 1097 LEVSKRAEG-SDSLDAGVKEAEVXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXX 921
LE K E S+ D G A++
Sbjct: 179 LEDLKSVEDDSEDEDWGKDAAKLVSEGEDASEDMDL------------------------ 214
Query: 920 XXXXKRKRTQSSRASICKPKAARKVNYDTPKRTMEVSSAKKVKLDVVKDQEMKTVDDKNV 741
+ + PK+ + R + +K L ++ KT+ DK
Sbjct: 215 -------EIEEEDDGVVGPKSRKVSGSKVVARKRKTGEGEK--LTPSSSKKSKTLADKRS 265
Query: 740 GGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKANAMQGGDMPNLSGEAAERFGNRLSEK 561
+ + V V K +T + N + G AA+RFG R ++K
Sbjct: 266 ANSK---MDSAVIGVNGKEPTATNEDCAKASNNVNVLLCG--------AADRFGQRETQK 314
Query: 560 LLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWWEFKSQHMDKVLFFKMG 381
+ +DRKDA + P D ++P+T+YLP FLK L+GGQRQWWEFKS+HMDKVLFFKMG
Sbjct: 315 FPFLGKDRKDANRRSPDDADYDPRTIYLPPNFLKGLTGGQRQWWEFKSKHMDKVLFFKMG 374
Query: 380 KFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLARKGYRVLVVEQTETPD 201
KFYEL+EMDAH+GAQEL LQYMKGEQPHCGFPEKNF NVEKLARKGYRVLVVEQTETP+
Sbjct: 375 KFYELYEMDAHIGAQELHLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETPE 434
Query: 200 QLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYMISIAEKGLDSFNSTQS 21
QLE RR+E GSKDKVV+REICAVVTKGT+ EG ML PDASY++++ E L + +
Sbjct: 435 QLENRRREMGSKDKVVRREICAVVTKGTLTEGEMLAANPDASYLMAVTESSLTAAFQQEK 494
Query: 20 VSIGIC 3
+ G+C
Sbjct: 495 RTYGVC 500
>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 351 bits (901), Expect = 5e-94
Identities = 224/549 (40%), Positives = 294/549 (53%), Gaps = 5/549 (0%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPSNDE-----T 1470
QQ I SFF+ + SS+ PS SP + K NP+ NPS+ T
Sbjct: 17 QQSQITSFFTK-------KPSSSSPSPSPLFPLKS---------NPNPNPSSSSCASPTT 60
Query: 1469 PAQKRARVDSSLVPETPSDDKPSGIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDEDSGM 1290
P+ + + +L T K G + V KR+KVYWP+D+ +YEG V S+D SG
Sbjct: 61 PSPLQGKRKLTLPIPTLVLKKSYG----QEVVDKRVKVYWPLDKNWYEGFVKSFDSASGK 116
Query: 1289 HSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQRESNFEEDKCLPTPQP 1110
H V YDDGE E + LA EK++W+ E KFRRL++ S + EE+K
Sbjct: 117 HLVEYDDGEEEMIELAEEKIEWV---EEAPARKFRRLRRFSVVEEAEKEEEEK---LEDL 170
Query: 1109 ETPSLEVSKRAEGSDSLDAGVKEAEVXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXX 930
E+ + S+ + +++D GV E E
Sbjct: 171 ESVEDDDSEDEDWEENVDKGVDEGE--------------------DVLEDMDLEIEEEEE 210
Query: 929 XXXXXXXKRKRTQSSRASICKPKAARKVNYDTPKRTMEVSSAKKVKLDVVKDQEMKTVDD 750
+R + ++ + + V TP SS+K K VD
Sbjct: 211 EEVVVGSRRGKASGKNKALSRKRKTSDVVKVTP------SSSKGSK---------NVVDK 255
Query: 749 KNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKANAMQGGDMPNLSGEAAERFGNRL 570
++V + + V + K +T V + NA+ G AA+RFG R
Sbjct: 256 RSVNNK----VESAVNGINGKEPVTTNVDCARASNNDNALLCG--------AADRFGQRE 303
Query: 569 SEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWWEFKSQHMDKVLFF 390
+EK + R+RKD G+ P D ++P+TLYLP FLK L+GGQRQWWEFKS+HMDKVLFF
Sbjct: 304 AEKFPFLGRNRKDVNGRSPEDANYDPRTLYLPPNFLKGLTGGQRQWWEFKSKHMDKVLFF 363
Query: 389 KMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLARKGYRVLVVEQTE 210
KMGKFYEL+EMDAH+GA EL LQYMKGEQPHCGFPEKNF NVEKLARKGYRVLVVEQTE
Sbjct: 364 KMGKFYELYEMDAHIGANELHLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTE 423
Query: 209 TPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYMISIAEKGLDSFNS 30
TP+QLE RR+E GSKDKVV+RE+CAVVTKGT+ EG ML PDASY++++ E +
Sbjct: 424 TPEQLEIRRREKGSKDKVVRREVCAVVTKGTLTEGEMLAANPDASYLMAVTESFQTAAYQ 483
Query: 29 TQSVSIGIC 3
+ G+C
Sbjct: 484 QGKHTYGVC 492
>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 349 bits (895), Expect = 2e-93
Identities = 222/539 (41%), Positives = 293/539 (54%), Gaps = 12/539 (2%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPSNDETPAQKR 1455
QQ I +FFS ++S+ PS SP + + K P+PS +P+ TP+ +
Sbjct: 17 QQSQITAFFS---------KTSSSPSPSPVLSKQDLNPKPSPSPSPSPSPT---TPSPVQ 64
Query: 1454 ARVDSSLV----PETPSDDKP-SGIQSH-ESFVGKRLKVYWPMDEAYYEGCVHSYDEDSG 1293
A++ L+ +T S P +G +S+ E V +R+KVYWP+D+++Y GCV S+DE +G
Sbjct: 65 AKLRKPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTG 124
Query: 1292 MHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQR------ESNFEEDK 1131
H V YDD + E+L L EK++W++ K RRL++ S ++ E+N EE+
Sbjct: 125 EHLVQYDDADEETLDLGKEKIEWVED----KGRSLRRLRRGSVFEKGVVPVGEANVEEES 180
Query: 1130 CLPTPQPETPSLEVSKRAEGSDSLDAGVKEAEVXXXXXXXXXXXXXXXXGXXXXXXXXXX 951
E + DS D +E E
Sbjct: 181 GGDDSSDEDWGKGKGREEVEDDSEDVEFEEEE---------------------------- 212
Query: 950 XXXXXXXXXXXXXXKRKRTQSSRASICKPKAARKVNYDTPKRTMEVSSAKKVKLDVVKDQ 771
K+ QS + K KA + + KR A+K V +
Sbjct: 213 -------DEEEEVEGPKKGQSKKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVE 265
Query: 770 EMKTVDDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKANAMQGGDMPNLSGEAA 591
MK + +KA+ + +P G+A
Sbjct: 266 PMKNAES----------------------------------RKASDILDNVLP---GDAL 288
Query: 590 ERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWWEFKSQH 411
ERFG R +EKL + +RKDA + PGD ++P+TLYLP FLK+L+GGQRQWWEFKS+H
Sbjct: 289 ERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKSRH 348
Query: 410 MDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLARKGYRV 231
MDKV+FFKMGKFYELFEMDAH+GA+ELDLQYMKG QPHCGFPEKNF NVEKLARKGYRV
Sbjct: 349 MDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKGGQPHCGFPEKNFSINVEKLARKGYRV 408
Query: 230 LVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYMISIAE 54
LVVEQTETP+QLE RRKE GSKDKVVKREICAVVTKGT+ EG ML PDASY++++ E
Sbjct: 409 LVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVTE 467
>dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1331
Score = 348 bits (894), Expect = 3e-93
Identities = 222/579 (38%), Positives = 308/579 (53%), Gaps = 31/579 (5%)
Frame = -1
Query: 1646 PKSLQQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPSNDE-- 1473
P +Q I +FF+ S S+ KP++ P + + L PS +PS
Sbjct: 12 PLVRKQSQITAFFASPSPSPPPSASTPKPAAEPSPSPLNPKARKPPLVVPSPSPSASTPK 71
Query: 1472 -------TPAQKRARVDSSLVPETPSDDKPS----------------GIQSHESFVGKRL 1362
+P + R +VP +PS KPS E VG+RL
Sbjct: 72 PAAGPSPSPLNPKVRKPPLVVP-SPSPPKPSPSPPPQPQQEKKKHDAAAAPAEEAVGRRL 130
Query: 1361 KVYWPMDEAYYEGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKT--KF 1188
+VYWP+D+A+YEG V +YD S H V YDDGE E + L EK +W AEE+ K
Sbjct: 131 RVYWPLDDAWYEGTVEAYDGGSRQHHVKYDDGEEEEVDLVKEKFEWA-AEEATPPPARKL 189
Query: 1187 RRLKKLSESQRESN---FEEDKCLPTPQPETPSLEVSKRAEGSDSLDAGVKEAEVXXXXX 1017
RRL+++S++ + + E++ + + E + + + + ++ +E EV
Sbjct: 190 RRLRRMSDTAKAKSPSVQEDEDTGDSTEDEDWKKDAAPEDDSEEEVELDDEEEEVVAVSS 249
Query: 1016 XXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXKRKRTQSSRASICKPKAARKVNYD 837
+ R S AS+ + +
Sbjct: 250 RKG----------------------------------KSRNSLSSASVSTLGSTPGLGSA 275
Query: 836 TPKRTMEVSSAKKVKLDVVKDQEMKTVDDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDK 657
+ T+ S K+ K+DV T+D +P +P + ++
Sbjct: 276 SSGSTL---SKKRKKVDV------GTLDCAKKFSFQPANTP-----------EKAEMKVP 315
Query: 656 SSCKKANAMQGGDMPNLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYL 477
+SC + L+G+ +ERFG+R EK + + RKDA GKRPGDPA++P+TL+L
Sbjct: 316 TSCGTGERILENVHLALTGDLSERFGSRQMEKFTFLGQGRKDAKGKRPGDPAYDPRTLFL 375
Query: 476 PQEFLKSLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPH 297
P +FLK+L+GGQRQWWEFKSQHMDKVLFFKMGKFYEL+EMDAHVG +EL+LQYMKG+QPH
Sbjct: 376 PPQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMDAHVGTKELNLQYMKGDQPH 435
Query: 296 CGFPEKNFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGT 117
CGFPEKN N+EKLA+KGYRVLVVEQTETPDQL+ RR+ETG+KDKVV+REICA+VTKGT
Sbjct: 436 CGFPEKNLAVNLEKLAQKGYRVLVVEQTETPDQLDLRRRETGTKDKVVRREICAMVTKGT 495
Query: 116 MVEGGMLDMCPDASYMISIAEK-GLDSFNSTQSVSIGIC 3
+ EG L PD SY++S+ E S S +IG+C
Sbjct: 496 LTEGESLLANPDPSYILSVVESYPCSSTKSQDGHTIGVC 534
>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 339 bits (870), Expect = 2e-90
Identities = 221/534 (41%), Positives = 283/534 (52%), Gaps = 7/534 (1%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPSNDETPAQKR 1455
QQ I +FFS ++S+ PS SP +K LL IG PS+ S
Sbjct: 17 QQSQITAFFS---------KTSSSPSPSP---LRKPLLVIG----PSKTTS--------- 51
Query: 1454 ARVDSSLVPETPSDDKPSGIQSH-ESFVGKRLKVYWPMDEAYYEGCVHSYDEDSGMHSVL 1278
P TP +G +S+ E V +R+KVYWP+D+++Y GCV S+DE +G H V
Sbjct: 52 --------PSTPV----TGSKSYGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQ 99
Query: 1277 YDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQR------ESNFEEDKCLPTP 1116
YDD + E+L L EK++W++ K RRL++ S ++ E+N EE+
Sbjct: 100 YDDADEETLDLGKEKIEWVED----KGRSLRRLRRGSVFEKGVVPVGEANVEEESGGDDS 155
Query: 1115 QPETPSLEVSKRAEGSDSLDAGVKEAEVXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXX 936
E + DS D +E E
Sbjct: 156 SDEDWGKGKGREEVEDDSEDVEFEEEE--------------------------------- 182
Query: 935 XXXXXXXXXKRKRTQSSRASICKPKAARKVNYDTPKRTMEVSSAKKVKLDVVKDQEMKTV 756
K+ QS + K KA + + KR A+K V + MK
Sbjct: 183 --DEEEEVEGPKKGQSKKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKNA 240
Query: 755 DDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKANAMQGGDMPNLSGEAAERFGN 576
+ +KA+ + +P G+A ERFG
Sbjct: 241 ES----------------------------------RKASDILDNVLP---GDALERFGA 263
Query: 575 RLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWWEFKSQHMDKVL 396
R +EKL + +RKDA + PGD ++P+TLYLP FLK+L+GGQRQWWEFKS+HMDKV+
Sbjct: 264 REAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKSRHMDKVI 323
Query: 395 FFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLARKGYRVLVVEQ 216
FFKMGKFYELFEMDAH+GA+ELDLQYMKG QPHCGFPEKNF NVEKLARKGYRVLVVEQ
Sbjct: 324 FFKMGKFYELFEMDAHIGAKELDLQYMKGGQPHCGFPEKNFSINVEKLARKGYRVLVVEQ 383
Query: 215 TETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYMISIAE 54
TETP+QLE RRKE GSKDKVVKREICAVVTKGT+ EG ML PDASY++++ E
Sbjct: 384 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVTE 437
>ref|NP_192116.1| DNA mismatch repair protein MSH6 [Arabidopsis thaliana]
gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA
mismatch repair protein MSH6; Short=AtMSH6; AltName:
Full=MutS protein homolog 6 gi|3912921|gb|AAC78699.1| G/T
DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein msh6-1
[Arabidopsis thaliana] gi|7268591|emb|CAB80700.1| G/T DNA
mismatch repair enzyme [Arabidopsis thaliana]
gi|332656719|gb|AEE82119.1| DNA mismatch repair protein
MSH6 [Arabidopsis thaliana]
Length = 1324
Score = 300 bits (767), Expect = 2e-78
Identities = 152/269 (56%), Positives = 192/269 (71%)
Frame = -1
Query: 809 SAKKVKLDVVKDQEMKTVDDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKANAM 630
++K ++ ++ KT + GG + S T ++ + S P K + +
Sbjct: 263 TSKVNRVSKTDSRKRKTSEVTKSGGEKK--SKTDTGTILKGFKASVVEPAKKIGQADRVV 320
Query: 629 QGGDMPNLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLS 450
+G + L G+A RFG R SEK + DR+DA +RP D ++P+TLYLP +F+K L+
Sbjct: 321 KGLEDNVLDGDALARFGARDSEKFRFLGVDRRDAKRRRPTDENYDPRTLYLPPDFVKKLT 380
Query: 449 GGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQ 270
GGQRQWWEFK++HMDKV+FFKMGKFYELFEMDAHVGA+ELD+QYMKGEQPHCGFPEKNF
Sbjct: 381 GGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNFS 440
Query: 269 DNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDM 90
N+EKL RKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKRE+CAVVTKGT+ +G ML
Sbjct: 441 VNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGEMLLT 500
Query: 89 CPDASYMISIAEKGLDSFNSTQSVSIGIC 3
PDASY++++ E G N T + G+C
Sbjct: 501 NPDASYLMALTEGGESLTNPTAEHNFGVC 529
Score = 96.3 bits (238), Expect = 4e-17
Identities = 74/222 (33%), Positives = 109/222 (49%), Gaps = 29/222 (13%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPSNDETPAQKR 1455
QQR I SFF S SS PS SP + KK + PNP ++PS +P +K
Sbjct: 17 QQRQITSFFGKSASSS----SSPSPSPSPSLSNKK--TPKSNNPNP-KSPSPSPSPPKKT 69
Query: 1454 ARVD---SSLVPE---TPSDDKPSGIQSH-----------------------ESFVGKRL 1362
+++ SS +P +P D PS +QS + VGK++
Sbjct: 70 PKLNPNPSSNLPARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSVVITYGDEVVGKQV 129
Query: 1361 KVYWPMDEAYYEGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRR 1182
+VYWP+D+ +Y+G V YD+ G H V Y+DGE ESL L EK +W+ E+S +F R
Sbjct: 130 RVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGEKS--GDRFNR 187
Query: 1181 LKKLSESQRESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLD 1056
LK+ + + R+ + D E ++E K ++G DS D
Sbjct: 188 LKRGASALRKVVTDSD-----DDVEMGNVEEDK-SDGDDSSD 223
>gb|EMT09463.1| DNA mismatch repair protein Msh6-1 [Aegilops tauschii]
Length = 852
Score = 299 bits (766), Expect = 2e-78
Identities = 143/203 (70%), Positives = 173/203 (85%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 LSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWW 429
L+G+ +ERFG+R +EK + + RKDA G+RPGDPA++P+TL+LP +FLK+L+GGQRQWW
Sbjct: 415 LTGDLSERFGSRQTEKFTFLGQGRKDAKGRRPGDPAYDPRTLFLPSQFLKNLTGGQRQWW 474
Query: 428 EFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLA 249
EFKSQHMDKVLFFKMGKFYEL+EMDAHVGA+ELDLQYMKG+QPHCGFPEKN N+EKLA
Sbjct: 475 EFKSQHMDKVLFFKMGKFYELYEMDAHVGAKELDLQYMKGDQPHCGFPEKNLAVNLEKLA 534
Query: 248 RKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYM 69
+KGYRVLVVEQTETPDQLE RR+ETG+KDKVV+REICA+VTKGT+ EG L PD SY+
Sbjct: 535 QKGYRVLVVEQTETPDQLELRRRETGTKDKVVRREICAMVTKGTLTEGESLLANPDPSYI 594
Query: 68 ISIAEK-GLDSFNSTQSVSIGIC 3
+S+AE S NS +IG+C
Sbjct: 595 LSVAESYPCSSTNSQDGHTIGVC 617
Score = 75.5 bits (184), Expect = 7e-11
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = -1
Query: 1376 VGKRLKVYWPMDEAYYEGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESV-- 1203
VG+RL+VYWP+D+A+YEG V +YD S H V YDDGE E + L EK +W AEE+
Sbjct: 208 VGRRLRVYWPLDDAWYEGTVDAYDGGSRRHRVKYDDGEEEEVDLVKEKFEWA-AEEATPP 266
Query: 1202 KKTKFRRLKKLSESQR 1155
K RRL+++S++ +
Sbjct: 267 PARKLRRLRRMSDTAK 282
>ref|XP_004300462.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
MSH6-like [Fragaria vesca subsp. vesca]
Length = 1291
Score = 297 bits (760), Expect = 1e-77
Identities = 149/248 (60%), Positives = 181/248 (72%)
Frame = -1
Query: 746 NVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKKANAMQGGDMPNLSGEAAERFGNRLS 567
N+G + S V + K++ + + S K N ++ GD A+ERF R +
Sbjct: 213 NLGSAKKTKSGGDVVTNGLKANLTEPTTEAESTKAVNGIKIGD-------ASERFSMREA 265
Query: 566 EKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWWEFKSQHMDKVLFFK 387
EK + R+DA + PGDP ++P+TLYLP +FLKSLSGGQRQWWEFKS+HMDKVLFFK
Sbjct: 266 EKFRFLGEKRRDAKKRCPGDPNYDPRTLYLPPDFLKSLSGGQRQWWEFKSKHMDKVLFFK 325
Query: 386 MGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLARKGYRVLVVEQTET 207
MGKFYELFEMDAH+GA+ELDLQYMKGEQPHCGFPEKNF NVEKLARKGYRVLV+EQTET
Sbjct: 326 MGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVIEQTET 385
Query: 206 PDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYMISIAEKGLDSFNST 27
P+Q+E RRKE GSKDKVVKRE+CAVVTKGT+ EG ML PDASY++++ E + N
Sbjct: 386 PEQMEVRRKEGGSKDKVVKREVCAVVTKGTLTEGEMLSANPDASYLMAVTETSQNLVNQN 445
Query: 26 QSVSIGIC 3
G+C
Sbjct: 446 AERVFGVC 453
Score = 73.2 bits (178), Expect = 3e-10
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Frame = -1
Query: 1592 SENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPSNDETPAQKRARVDSSLVPE-TPS 1416
S R + P +P+ K P+PS +P + +SS P +P
Sbjct: 2 SSRRRSNGASPLINPQRQITSFFAKATSSPSPSPSPI---------PKSNSSPSPSPSPL 52
Query: 1415 DDKPSGIQSH-ESFVGKRLKVYWPMDEAYYEGCVHSYDEDSGMHSVLYDDGEFESLILAN 1239
+ KPS + + E VGKR+KV WP D A+Y+GCV S++++ H + YDDG+ E L L+
Sbjct: 53 ESKPSPTKCYGEEVVGKRIKVLWPADRAWYKGCVKSFNKEKTSHLIQYDDGDEEELNLSL 112
Query: 1238 EKVQWI-DAEESVKKTKFRRLKKLSESQRESNFEEDK 1131
EK + + D ++K+ + L ++ EEDK
Sbjct: 113 EKFELLQDTVTNLKRLRRGPLPTTPDAPVAVAEEEDK 149
>dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group]
gi|51091562|dbj|BAD36299.1| putative mismatch binding
protein Mus3 [Oryza sativa Japonica Group]
Length = 1253
Score = 295 bits (755), Expect = 4e-77
Identities = 154/278 (55%), Positives = 196/278 (70%), Gaps = 8/278 (2%)
Frame = -1
Query: 812 SSAKKVKLDVVKDQEMKTVDDKNVGGRRPCFSPTPVASVQRKSD-DSTQVPDKSSCKKAN 636
+ +++V+LD +D E + V K G++ T ++ + S S + + KK
Sbjct: 182 NDSEEVELDDEEDDEEEVVAVKTRKGKKNNPLSTSASTPKLASGLGSASISGSTLSKKRR 241
Query: 635 AMQGGDMP------NLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLP 474
+ G+ P L+GE AERF R +EK + RKDA G+RPG+P ++P+TL LP
Sbjct: 242 KVDAGEQPLENALTALTGEVAERFAQRQAEKFKFLGEGRKDAKGRRPGNPNYDPRTLSLP 301
Query: 473 QEFLKSLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHC 294
+FL SL+GGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGA+ELDLQYMKG++PHC
Sbjct: 302 SQFLNSLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGDKPHC 361
Query: 293 GFPEKNFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTM 114
GFPEKNF+ N+EKLA+KGYRVLV+EQTETP+QL+ RRKETG KDKVV+REICA+VTKGT+
Sbjct: 362 GFPEKNFELNLEKLAKKGYRVLVIEQTETPEQLDLRRKETGVKDKVVRREICAMVTKGTL 421
Query: 113 VEGGMLDMCPDASYMISIAEK-GLDSFNSTQSVSIGIC 3
EG L PD SY+ S+AE S +IG+C
Sbjct: 422 TEGESLLANPDPSYLFSVAESYQCGSEKDQDGHTIGVC 459
Score = 92.0 bits (227), Expect = 7e-16
Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Frame = -1
Query: 1562 PSSSPEYNTKKHLLK-----IGHLPNPSQNPSNDETPAQKRARVDSSLVPETPSDDKPSG 1398
PSS N + LL+ +P+ PS +P RA VP P + PS
Sbjct: 4 PSSRRLSNGRSPLLRKQSQITAFFSSPTAKPS--PSPLNPRATKPPLAVPSPPPPNPPSP 61
Query: 1397 IQSHESFVGKRLKVYWPMDEAYYEGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWID 1218
Q E+ VG+RL+VYWP+D+A+YEG V YD S H V YDDGE E + LA+E+ +W
Sbjct: 62 PQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAA 121
Query: 1217 AEESVKKT-----KFRRLKKLSES 1161
A + + T K RRL+++S++
Sbjct: 122 AADEEEVTPQPSRKLRRLRRMSDA 145
>ref|XP_006661208.1| PREDICTED: DNA mismatch repair protein MSH6-like, partial [Oryza
brachyantha]
Length = 1227
Score = 295 bits (754), Expect = 6e-77
Identities = 153/286 (53%), Positives = 195/286 (68%), Gaps = 7/286 (2%)
Frame = -1
Query: 839 DTPKRTMEVSSAKKVKLDVVKDQEMKTVDDKNVGGRRPCFSPTPVASVQRKSDDSTQVPD 660
D K + +++V+LD D+E+ V + G ++ + S +
Sbjct: 149 DWKKDAVAEDDSEEVELDDEVDEELVAVKTRK-GNKKNSLLMSASTPKLASGSGSVSISG 207
Query: 659 KSSCKKANAMQGGDMP------NLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAH 498
+ KK + G+ P L+GE AERFG R +EK + RKDA G+RPG+P++
Sbjct: 208 STLSKKRRKVDAGEQPLENAHTALTGEVAERFGQRQAEKFKFLGEGRKDAKGRRPGNPSY 267
Query: 497 NPKTLYLPQEFLKSLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQY 318
+P+TL L +FL L+GGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGA+ELDLQY
Sbjct: 268 DPRTLSLSPQFLNGLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKELDLQY 327
Query: 317 MKGEQPHCGFPEKNFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREIC 138
MKG+QPHCGFPEKNF+ N+EKLA+KGYRVLVVEQTETP+QLE RRK+TG KDKVV+REIC
Sbjct: 328 MKGDQPHCGFPEKNFEVNLEKLAKKGYRVLVVEQTETPEQLELRRKKTGVKDKVVRREIC 387
Query: 137 AVVTKGTMVEGGMLDMCPDASYMISIAEK-GLDSFNSTQSVSIGIC 3
A VTKGT+ EG L PD Y+ S+AE S + + ++IG+C
Sbjct: 388 ATVTKGTLTEGESLLANPDPLYLFSVAESYQCFSDKNKEGLTIGVC 433
Score = 87.8 bits (216), Expect = 1e-14
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Frame = -1
Query: 1472 TPAQKRARVDSSLV---PETPSDDKPSGIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDE 1302
+P RAR L P P+ P + E VG+RL+VYWP+D+A+YEG V +YD
Sbjct: 13 SPLNPRARKPPPLAAPSPSPPNPPPPERQRREEEKVGRRLRVYWPLDDAWYEGRVEAYDV 72
Query: 1301 DSGMHSVLYDDGEFESLILANEKVQWIDAEESV---KKTKFRRLKKLSES 1161
S H V YDDGE E + LANE+ +W EE V K RRL+++S++
Sbjct: 73 GSRRHRVRYDDGEEEEVDLANERYEWAAGEERVTPQPARKLRRLRRMSDA 122
>gb|EMS59893.1| DNA mismatch repair protein Msh6-1 [Triticum urartu]
Length = 537
Score = 294 bits (753), Expect = 7e-77
Identities = 141/203 (69%), Positives = 171/203 (84%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 LSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWW 429
L+G+ +ERFG+R EK + + RKDA G+RP DPA++P+TL+LP +FLK+L+GGQRQWW
Sbjct: 140 LTGDLSERFGSRQMEKFTFLGQGRKDAKGRRPADPAYDPRTLFLPPQFLKNLTGGQRQWW 199
Query: 428 EFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLA 249
EFKSQHMDKVLFFKMGKFYEL+EMDAHVGA+ELDLQYMKG+QPHCGFPEKN N+EKLA
Sbjct: 200 EFKSQHMDKVLFFKMGKFYELYEMDAHVGAKELDLQYMKGDQPHCGFPEKNLAVNLEKLA 259
Query: 248 RKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYM 69
+KGYRVLVVEQTETPDQLE RR+ETG+KDKVV+REICA+VTKGT+ EG L PD SY+
Sbjct: 260 QKGYRVLVVEQTETPDQLELRRRETGTKDKVVRREICAMVTKGTLTEGESLLANPDTSYI 319
Query: 68 ISIAEK-GLDSFNSTQSVSIGIC 3
+S+AE +S S +IG+C
Sbjct: 320 LSVAESYPCNSTKSQDGHTIGVC 342
>ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus trichocarpa]
gi|550324012|gb|EEE98622.2| DNA mismatch repair protein
MSH6-1 [Populus trichocarpa]
Length = 1293
Score = 294 bits (752), Expect = 9e-77
Identities = 145/214 (67%), Positives = 167/214 (78%)
Frame = -1
Query: 644 KANAMQGGDMPNLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEF 465
K N + G L +A+ERF R +EK + R+R+DA +RPGD ++P+TLYLP EF
Sbjct: 279 KENGVFNGFENALMTDASERFSTREAEKFPFLGRERRDAKRRRPGDVDYDPRTLYLPAEF 338
Query: 464 LKSLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFP 285
KSL+GGQRQWWEFKS+HMDKVLFFKMGKFYELFEMDAHVGA+ELDLQYMKGEQPHCGFP
Sbjct: 339 AKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFP 398
Query: 284 EKNFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEG 105
EKNF NVEKLARKGYRVLVVEQTETP+QLE RRKE GSKDKVVKREICAV+TKGT+ EG
Sbjct: 399 EKNFSLNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVITKGTLTEG 458
Query: 104 GMLDMCPDASYMISIAEKGLDSFNSTQSVSIGIC 3
L PDASY++++ E N G+C
Sbjct: 459 EFLSANPDASYLMALTESSQSLANQGLERIFGVC 492
Score = 97.8 bits (242), Expect = 1e-17
Identities = 66/177 (37%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Frame = -1
Query: 1631 QRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHL---PNPS---QNPSNDET 1470
QR I +FFS +T PS SP K + H PNPS Q+PS+ T
Sbjct: 18 QRQITAFFS----------KTTTPSPSPSPTLSKKQIPKSHTKPNPNPSSRTQSPSSSPT 67
Query: 1469 ---PAQKRARVDSSLVPETPSDDKPS-GIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDE 1302
P Q + + ++ +TPS G+ E+ V +R++VYWP+D+++YEG V SYD+
Sbjct: 68 TPSPVQSKPKKPLLVIGQTPSPSPSKVGVYGKEA-VERRVRVYWPLDKSWYEGLVKSYDD 126
Query: 1301 DSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQRESNFEEDK 1131
+S H + YDD E E L L NEK++W+ E VK KF+RL++ S R+ E+D+
Sbjct: 127 ESKKHLIQYDDSEEELLDLNNEKIEWV--EPCVK--KFKRLRRGSLGFRKIVLEDDE 179
>tpg|DAA61384.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
gi|414885371|tpg|DAA61385.1| TPA: hypothetical protein
ZEAMMB73_756272 [Zea mays]
Length = 762
Score = 293 bits (751), Expect = 1e-76
Identities = 146/217 (67%), Positives = 171/217 (78%), Gaps = 1/217 (0%)
Frame = -1
Query: 653 SCKKANAMQGGDMPNLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLP 474
SC + G D +G+AAERFG R +EK + RKDA G+RPG+P +P+TL LP
Sbjct: 289 SCGQKGQTTGNDYTAPTGDAAERFGQRDAEKFKFLGEGRKDAKGRRPGNPGFDPRTLLLP 348
Query: 473 QEFLKSLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHC 294
+FLK+L+GGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGA++LDLQYMKGEQPHC
Sbjct: 349 PQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKDLDLQYMKGEQPHC 408
Query: 293 GFPEKNFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTM 114
GFPEKN N+EKLA KGYRVLVVEQTETPDQLE RRKE G KDKVV+REICAVVTKGT+
Sbjct: 409 GFPEKNLSVNLEKLAEKGYRVLVVEQTETPDQLELRRKEMGIKDKVVRREICAVVTKGTL 468
Query: 113 VEGGMLDMCPDASYMISIAEKGLDSFNSTQ-SVSIGI 6
+EG L PD SY++S+ E S N +Q + +IG+
Sbjct: 469 IEGEHLLANPDPSYLLSVTESYQRSPNKSQDTCTIGV 505
Score = 76.3 bits (186), Expect = 4e-11
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Frame = -1
Query: 1646 PKSLQQRSIASFFS---PGKKSENIRRSSTKPSSSP---EYNTKKHLLKIG----HLPNP 1497
P +Q I +FFS P ++KPS SP T+ L + LP P
Sbjct: 12 PLVRKQSQITAFFSSPTPSPSPSGPSPGASKPSPSPLNPSARTRSPLAAVSPSSPKLPQP 71
Query: 1496 SQNPSNDETPAQKRARVDSSLVPETPSDDKPSGIQSHESFVGKRLKVYWPMDEAYYEGCV 1317
Q + ++ D++LVP + + VG+ L+VYWP+D+A+Y+G V
Sbjct: 72 QQKQKEVKKVKEEH---DAALVPAPAAAE----------VVGRCLRVYWPLDDAWYKGKV 118
Query: 1316 HSYDEDSGMHSVLYDDGEFESLILANEKVQW---IDAEESVKKTKFRRLKKLSE 1164
+YD S H V YDDG+ E + L EK +W ++ + K RRL+++S+
Sbjct: 119 EAYDAASRRHRVKYDDGDEEEVDLRKEKFEWAAVVEESTLLPARKLRRLRRMSD 172
>ref|XP_006286904.1| hypothetical protein CARUB_v10000048mg [Capsella rubella]
gi|482555610|gb|EOA19802.1| hypothetical protein
CARUB_v10000048mg [Capsella rubella]
Length = 1325
Score = 292 bits (748), Expect = 3e-76
Identities = 148/273 (54%), Positives = 193/273 (70%)
Frame = -1
Query: 821 MEVSSAKKVKLDVVKDQEMKTVDDKNVGGRRPCFSPTPVASVQRKSDDSTQVPDKSSCKK 642
++ + K +++ ++ KT + GG + S T ++ + + S P K +
Sbjct: 261 IDEGTPKVIRVSKPDCRKRKTSEVTKSGGEKK--SRTDKDTILKGFEASVVEPPKKIEEA 318
Query: 641 ANAMQGGDMPNLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFL 462
++G + L G+A RFG R SEK + DR+DA +RP D ++P+TLYLP +F+
Sbjct: 319 DRVVKGLEDNILDGDALARFGARESEKFCFLGVDRRDAKRRRPTDENYDPRTLYLPPDFV 378
Query: 461 KSLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPE 282
K L+GGQRQWWEFKS+HMDKV+FFKMGKFYELFEMDAHVGA+ELD+QYMKGEQPHCGFPE
Sbjct: 379 KKLTGGQRQWWEFKSKHMDKVVFFKMGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPE 438
Query: 281 KNFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGG 102
KNF N+EKL RKGYRVLVVEQTETPDQLE+RRKE GSKDKVVKRE+CAVVTKGT+ +G
Sbjct: 439 KNFSVNIEKLVRKGYRVLVVEQTETPDQLEKRRKEKGSKDKVVKREVCAVVTKGTLTDGE 498
Query: 101 MLDMCPDASYMISIAEKGLDSFNSTQSVSIGIC 3
M+ PDASY++++ E G + + G+C
Sbjct: 499 MILTNPDASYLMALTEGGESLTDQKAEHNFGVC 531
Score = 90.5 bits (223), Expect = 2e-15
Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Frame = -1
Query: 1646 PKSLQQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNP-SQNPS-NDE 1473
P S S AS S K ++ + + PS SP K + K+ P+P +++PS
Sbjct: 31 PSSSPSPSPASSLSSKKTPKSNKPNPNSPSPSPP--PPKKIPKLNSNPDPPARSPSPGPA 88
Query: 1472 TPAQKRARVDSSL--VPETPSDDKPSGIQSHESFVGKRLKVYWPMDEAYYEGCVHSYDED 1299
TP+ +++ SL + +TPS + I+ + VG++++VYWP+D+ +Y+G V YD+
Sbjct: 89 TPSPVQSKFKKSLLVIGQTPSPPLSAEIKYGDEVVGRQVRVYWPLDKRWYDGSVTFYDKG 148
Query: 1298 SGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQRESNFEEDKCLPT 1119
G H V Y+DGE ESL L EK++W+ E+S K RL++ + + R+ ++D
Sbjct: 149 VGKHVVEYEDGEEESLDLGKEKIEWMVVEKSGDTVK--RLRRGTSAFRKVVTDDD----D 202
Query: 1118 PQPETPSLEVSK--RAEGSDSLD 1056
E ++E K +++G DS D
Sbjct: 203 DDVEMGNVEEDKENQSDGDDSSD 225
>gb|EMJ02419.1| hypothetical protein PRUPE_ppa000344mg [Prunus persica]
Length = 1263
Score = 291 bits (745), Expect = 6e-76
Identities = 146/221 (66%), Positives = 171/221 (77%)
Frame = -1
Query: 665 PDKSSCKKANAMQGGDMPNLSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKT 486
P+ S K AN M +SG+A+ RF R +EKL + R+DA + PGD ++P+T
Sbjct: 245 PNVESMKVANGMN----TVVSGDASARFIVREAEKLHFLGEVRRDAKKRFPGDANYDPRT 300
Query: 485 LYLPQEFLKSLSGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGE 306
LYLP +FLKSLSGGQRQWWEFKS+HMDKVLFFKMGKFYELFEMDAH+GA+EL LQYMKGE
Sbjct: 301 LYLPPDFLKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELGLQYMKGE 360
Query: 305 QPHCGFPEKNFQDNVEKLARKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVT 126
QPHCGFPEKNF NVEKLARKGYRVLV+EQTETP+Q+E RRKE GSKDKVVKREICAVVT
Sbjct: 361 QPHCGFPEKNFSMNVEKLARKGYRVLVIEQTETPEQMELRRKEDGSKDKVVKREICAVVT 420
Query: 125 KGTMVEGGMLDMCPDASYMISIAEKGLDSFNSTQSVSIGIC 3
KGT+ EG ML PDASY++++ E + N G+C
Sbjct: 421 KGTLTEGEMLSANPDASYLMAVTENSQNVANQNTERIFGVC 461
Score = 88.2 bits (217), Expect = 1e-14
Identities = 60/159 (37%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQNPSNDETPAQKR 1455
QQR I SFFS SS P SS T+ PNP PS T
Sbjct: 17 QQRQITSFFSK-------TTSSPSPISSKSKQTQN--------PNPCPGPSPSHTTP--- 58
Query: 1454 ARVDSSLVPETPSDDKPSGIQSH-ESFVGKRLKVYWPMDEAYYEGCVHSYDEDSGMHSVL 1278
+P KP +SH + VGKR++VYWP+D +YEG V + +D+G H V
Sbjct: 59 ----------SPLQSKPKPKKSHGQEVVGKRIRVYWPLDNIWYEGYVKLFSKDNGKHLVQ 108
Query: 1277 YDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSES 1161
YDD E E L L EK++W+ +E+VK K R LS S
Sbjct: 109 YDDAEEELLDLGEEKIEWV--QETVKTLKRLRRGPLSTS 145
>ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata] gi|297320779|gb|EFH51201.1| hypothetical protein
ARALYDRAFT_912022 [Arabidopsis lyrata subsp. lyrata]
Length = 1326
Score = 291 bits (744), Expect = 8e-76
Identities = 141/202 (69%), Positives = 165/202 (81%)
Frame = -1
Query: 608 LSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWW 429
L G+A RFG R SEK + DR+DA +R D ++P+TLYLP +F+K L+GGQRQWW
Sbjct: 330 LDGDALARFGARESEKFRFLGVDRRDAKRRRSTDENYDPRTLYLPPDFVKKLTGGQRQWW 389
Query: 428 EFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLA 249
EFKS+HMDKV+FFKMGKFYELFEMDAHVGA+ELD+QYMKGEQPHCGFPEKNF N+EKL
Sbjct: 390 EFKSKHMDKVVFFKMGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLV 449
Query: 248 RKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYM 69
RKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGT+ +G ML PDASY+
Sbjct: 450 RKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTLTDGEMLLTNPDASYI 509
Query: 68 ISIAEKGLDSFNSTQSVSIGIC 3
+++ E G + T + G+C
Sbjct: 510 MALTEGGECLTDQTAEHNFGVC 531
Score = 94.4 bits (233), Expect = 1e-16
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Frame = -1
Query: 1634 QQRSIASFFSPGKKSENIRRSSTKPSSSPEYNTKKHLLKIGHLPNPSQ---------NPS 1482
QQR I SFF S + S PS S + K + P+PS NPS
Sbjct: 17 QQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKPNPNPNSPSPSPSPPKKTPKLNPNPS 76
Query: 1481 NDE------------TPAQKRARVDSSLVPETPSDDKPSGIQSHESFVGKRLKVYWPMDE 1338
+D +P Q + + ++ +TPS + + I + VGK+++VYWP+D+
Sbjct: 77 SDPPARSPSPGPATPSPVQSKFKKPLLVIGQTPSPPQSAVITYGDEVVGKQVRVYWPLDK 136
Query: 1337 AYYEGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKFRRLKKLSESQ 1158
+Y+G V YD+ H V Y+DGE ESL L EK++W+ ++S +F+RL++ + +
Sbjct: 137 KWYDGSVTFYDKCECKHVVEYEDGEEESLDLGKEKIEWVVGDKS--GDRFKRLRRGASAL 194
Query: 1157 RESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLD 1056
R+ ++D + E E +++G DS D
Sbjct: 195 RKVVTDDDDDVEMGNVEE---EKGDKSDGDDSSD 225
>ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 290 bits (742), Expect = 1e-75
Identities = 142/203 (69%), Positives = 168/203 (82%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 LSGEAAERFGNRLSEKLLPVFRDRKDAAGKRPGDPAHNPKTLYLPQEFLKSLSGGQRQWW 429
L+GE AERFG R +EK + RKDA G+RPG PA++P+TL LP +FL +L+GGQRQWW
Sbjct: 317 LTGELAERFGQRQAEKFKFLGDGRKDAKGRRPGHPAYDPRTLSLPPQFLANLTGGQRQWW 376
Query: 428 EFKSQHMDKVLFFKMGKFYELFEMDAHVGAQELDLQYMKGEQPHCGFPEKNFQDNVEKLA 249
EFKSQHMDKVLFFKMGKFYEL+EMDAHVGA+ELDLQYMKG+QPHCGFPEKN N+EKLA
Sbjct: 377 EFKSQHMDKVLFFKMGKFYELYEMDAHVGARELDLQYMKGDQPHCGFPEKNLSVNLEKLA 436
Query: 248 RKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREICAVVTKGTMVEGGMLDMCPDASYM 69
+KGYRVLVVEQTETP+QLE RRKETG+KDKVV+REICA+VTKGT+ EG L PD SY+
Sbjct: 437 QKGYRVLVVEQTETPNQLELRRKETGTKDKVVRREICAMVTKGTLTEGEFLLANPDPSYI 496
Query: 68 ISIAEKGLDSFNSTQ-SVSIGIC 3
+S+AE S +Q +IG+C
Sbjct: 497 LSVAESYQHSSKKSQDGHTIGVC 519
Score = 94.0 bits (232), Expect = 2e-16
Identities = 65/185 (35%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Frame = -1
Query: 1646 PKSLQQRSIASFFSPGKKSENIRRSSTKP----SSSPEYNTKKHLLKIGHLPNPSQNPSN 1479
P +Q I SFFS S + +S+ KP SS+P+ + K P P+ PS
Sbjct: 12 PLVRKQSQITSFFSTPSPSSSASKSAAKPTPSPSSTPKSDAKPSPSPSSSAPKPAAKPS- 70
Query: 1478 DETPAQKRARVDSSLVPET--PSDDKPSGIQSHES---------------FVGKRLKVYW 1350
+P +AR +VP P P+ Q + VG+RL+VYW
Sbjct: 71 -PSPLNPKARKPPLVVPSPSPPKSAPPAPQQQGQDEEKKEQNASAAPAGEAVGRRLRVYW 129
Query: 1349 PMDEAYYEGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESV--KKTKFRRLK 1176
P+D+A+YEG V YDE S H V YDDGE E + L EK +W AEE+ K RRL+
Sbjct: 130 PLDDAWYEGRVDDYDEGSRRHRVKYDDGEDEEVDLRKEKFEWA-AEEATPPPARKLRRLR 188
Query: 1175 KLSES 1161
++S++
Sbjct: 189 RMSDT 193