BLASTX nr result

ID: Ephedra27_contig00006614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006614
         (433 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG69686.1| hypothetical protein 2_3222_02, partial [Pinus ta...    58   2e-06
gb|AFG69692.1| hypothetical protein 2_3222_02, partial [Pinus ta...    55   7e-06

>gb|AFG69686.1| hypothetical protein 2_3222_02, partial [Pinus taeda]
           gi|383172641|gb|AFG69687.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172643|gb|AFG69688.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172645|gb|AFG69689.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172647|gb|AFG69690.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172649|gb|AFG69691.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172653|gb|AFG69693.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172655|gb|AFG69694.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172657|gb|AFG69695.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172659|gb|AFG69696.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172661|gb|AFG69697.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
           gi|383172663|gb|AFG69698.1| hypothetical protein
           2_3222_02, partial [Pinus taeda]
          Length = 88

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
 Frame = -2

Query: 432 VRDIIKVLEELDTLPPKVVKEVTAAMVQKNPEIAEQEPRDIKVEANNAVNGV------VS 271
           VRDI KVL+ELD LPPK+V+EVT ++ + +PE+ E++    K+++++  + +      V 
Sbjct: 15  VRDIEKVLQELDALPPKLVREVTVSLAESHPELKEKDIDTAKLKSSDVFHEILNSQKAVK 74

Query: 270 KWKSLTRMQSSNRIC 226
            WK     Q  NRIC
Sbjct: 75  AWKKFV-AQKPNRIC 88


>gb|AFG69692.1| hypothetical protein 2_3222_02, partial [Pinus taeda]
          Length = 88

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
 Frame = -2

Query: 432 VRDIIKVLEELDTLPPKVVKEVTAAMVQKNPEIAEQEPRDIKVEANNAVNGV------VS 271
           VRDI KVL+ELD LPPK+V+EV  ++ + +PE+ E++    K+++++  + +      V 
Sbjct: 15  VRDIEKVLQELDALPPKLVREVMVSLAESHPELKEKDIDTAKLKSSDVFHEILNSQKAVK 74

Query: 270 KWKSLTRMQSSNRIC 226
            WK     Q  NRIC
Sbjct: 75  AWKKFV-AQKPNRIC 88


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