BLASTX nr result

ID: Ephedra27_contig00006605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006605
         (763 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829324.1| hypothetical protein AMTR_s00202p00037600 [A...    61   4e-07

>ref|XP_006829324.1| hypothetical protein AMTR_s00202p00037600 [Amborella trichopoda]
            gi|548834344|gb|ERM96740.1| hypothetical protein
            AMTR_s00202p00037600 [Amborella trichopoda]
          Length = 704

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 74/262 (28%), Positives = 110/262 (41%), Gaps = 23/262 (8%)
 Frame = +1

Query: 43   KENEPDPDD-CLMLTKDEPDPDDCL--IENEEPDPDDHSMG---VKY--EPDPDDCLEER 198
            +  EPDPDD C    ++EPDPDD     + EEP PD+ S     +K+  EPDPDD  +E 
Sbjct: 425  RREEPDPDDLCDHRKREEPDPDDLCDHRKREEPGPDEFSTKKGILKHVSEPDPDD--DEI 482

Query: 199  EVESDLDE---KMLSDTNHHSYQ-------TQGHNIEDNLENCQHHVSSAKADAQHRLQE 348
              E D DE   K+L +    S         ++   IE + ++ Q      K D +  L+ 
Sbjct: 483  HEEPDPDETNSKVLGNELKTSEPDPDDTGVSEAMAIEPDQDDTQDISEGFKPDPKEHLET 542

Query: 349  GTHNHVLARDEQLDANYTTVVDPSRPK-EEPDPDDGSEFGNGSPNGMVQHVDDYEGKSKA 525
              +       E+   N   + D    +  EPDPDD  + G   P+      DD E K+ A
Sbjct: 543  QINEPEPDDFEKAVINEPDLDDSENARTSEPDPDDFDKAGTNEPD-----PDDTE-KAGA 596

Query: 526  TFXXXXXXXXXXXXXXFSYNDTLENHSDMAVDSSNG----IVNLDLNDADGSLKRIQESS 693
                              Y+D +  +  +  DS N        +DL++    L+RIQ+S 
Sbjct: 597  NEPDP------------DYSDKVGTNEPVRDDSENAETFQAEGMDLDE----LRRIQDSV 640

Query: 694  VTACMSFNDLIQKLKYQAPPIE 759
                      I++LK +A P E
Sbjct: 641  TIVTTRLQSSIERLKAEASPFE 662


Top