BLASTX nr result

ID: Ephedra27_contig00006591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006591
         (462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18096.1| unknown [Picea sitchensis]                              60   2e-07
gb|ABR18112.1| unknown [Picea sitchensis]                              60   4e-07
gb|ABR16444.1| unknown [Picea sitchensis]                              56   4e-06

>gb|ABR18096.1| unknown [Picea sitchensis]
          Length = 966

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
 Frame = +3

Query: 9   MRSHLMEMQSSSSQYHTQVSPAVERCTKQLMPVLEEAKTRFPEDLPS------------L 152
           M   L ++++        +   VERC K++   L EAK                      
Sbjct: 44  MEGFLKDIRNQFQDQQKSLPEPVERCLKKMNKALGEAKDLIDRAKRHEERGWCLRCCCCF 103

Query: 153 LGSLTLHSNMEEVKMKLEAGFKELD---SILARQDLISKTALLQPPKPLMQPEPETGFVG 323
           L +  L + +++ K   +  FKEL+   SI A    I   A  Q    L+QP PE+GF+G
Sbjct: 104 LCNPNLPTQIKDWKNTFDGLFKELERCFSIHANAQQILSAAAPQADL-LLQPVPESGFIG 162

Query: 324 DVIKTLEKRMRE-LIRHDNPARIIVVHGLGGVGKTTLLHKVYNS 452
             I+  + R++  L   D  AR+I V+G+ GVGKT+LL  +YN+
Sbjct: 163 LGIRAAQDRLQTWLSAPDCQARVIGVYGMAGVGKTSLLQVIYNT 206


>gb|ABR18112.1| unknown [Picea sitchensis]
          Length = 642

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
 Frame = +3

Query: 9   MRSHLMEMQSSSSQYHTQVSPAVERCTKQLMPVLEEAKTRFPEDLPS--------LLGSL 164
           ++S L++++       T++  A+E C   +   L+E +                 L+ + 
Sbjct: 47  VKSLLLQIEQQFQDQQTRLPEAIEVCLTSMTDHLKEGQLLINRANQQRRRCFGCCLMCNP 106

Query: 165 TLHSNMEEVKMKLEAGFKELDSILARQDLISKTALLQPPKP--LMQPEPETGFVGDVIKT 338
            L + + + + +    F+EL  + +     ++      P+   L+QP PE+GFVG  I++
Sbjct: 107 NLFTRITDWETRFRQLFQELVGVFSVSANTTQIVSTSAPQTDVLLQPVPESGFVGPAIQS 166

Query: 339 LEKRMRELIRHDNP-ARIIVVHGLGGVGKTTLLHKVYN 449
            + R++  +   +P AR+I V G+GGVGKT+LL  VYN
Sbjct: 167 AQMRLQTWLGEAHPQARMIGVFGMGGVGKTSLLKLVYN 204


>gb|ABR16444.1| unknown [Picea sitchensis]
          Length = 576

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
 Frame = +3

Query: 9   MRSHLMEMQSSSSQYHTQVSPAVERCTKQLMPVLEEAKT---RFPEDLPSLLG-----SL 164
           M   L  +Q+       Q+   VERC  ++   L EA     R        LG     S 
Sbjct: 48  MEESLRHIQNQFEVQQRQLPELVERCLGRIKDALVEANALIDRANRQRERCLGCCFFCSP 107

Query: 165 TLHSNMEEVKMKLEAGFKELDSILARQDLISKTALLQPPKP--LMQPEPETGFVGDVIKT 338
            +   + E K      F+ L S L+     ++      P+   L+QP P++GFVG  ++T
Sbjct: 108 KIPGEIREWKTGFGELFQHLQSALSTAANTAQIVGFAQPQAEVLLQPLPDSGFVGSGVET 167

Query: 339 LEKRMRELIRHDNP-ARIIVVHGLGGVGKTTLLHKVYNS 452
             +++ + +   +  AR+I V+G+ GVGKT+LL  +YN+
Sbjct: 168 GREQLLQWLNEPHSLARVIGVYGMAGVGKTSLLQVIYNN 206


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