BLASTX nr result
ID: Ephedra27_contig00006531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00006531
(1132 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16629.1| unknown [Picea sitchensis] 377 e-102
sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chlo... 360 6e-97
ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana] gi|... 360 6e-97
gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabido... 360 6e-97
ref|XP_004252016.1| PREDICTED: DNA gyrase subunit B, chloroplast... 359 1e-96
ref|XP_006297063.1| hypothetical protein CARUB_v10013064mg [Caps... 359 1e-96
ref|XP_006355766.1| PREDICTED: DNA gyrase subunit B, chloroplast... 358 2e-96
ref|XP_002884787.1| hypothetical protein ARALYDRAFT_478355 [Arab... 358 2e-96
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor... 357 4e-96
ref|XP_006407588.1| hypothetical protein EUTSA_v10020150mg [Eutr... 356 8e-96
gb|EOY08861.1| Dna gyrase b2 isoform 1 [Theobroma cacao] 353 7e-95
ref|XP_002323244.2| DNA topoisomerase 2 family protein [Populus ... 352 2e-94
gb|EMJ05458.1| hypothetical protein PRUPE_ppa001942mg [Prunus pe... 352 2e-94
ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm... 351 4e-94
ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplast... 350 5e-94
ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplast... 350 5e-94
ref|XP_001785766.1| predicted protein [Physcomitrella patens] gi... 350 5e-94
ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana] gi|... 350 5e-94
emb|CAC05495.1| DNA gyrase subunit B-like protein [Arabidopsis t... 350 5e-94
ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arab... 350 6e-94
>gb|ABR16629.1| unknown [Picea sitchensis]
Length = 737
Score = 377 bits (969), Expect = e-102
Identities = 188/242 (77%), Positives = 216/242 (89%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S LR SA+PGKLA+CS +D + EIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER
Sbjct: 496 SVLRPSALPGKLADCSASDPREAEIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 555
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K+ L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 556 KDEAAMYKNEEIQNLILGLGLGLKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFF 615
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALFEEG +YVGVPPLYKVERG++A YCFD++ LK L K +P N+SYNIQRFKGLGE
Sbjct: 616 RYQRALFEEGYIYVGVPPLYKVERGRQAHYCFDEDELKKLQKTFPSNASYNIQRFKGLGE 675
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMPLQLWETT++PATRKLKQLT++DA EA+ VF+LLMG+ VEPRK+LIE+SASK +E L
Sbjct: 676 MMPLQLWETTLDPATRKLKQLTVEDAAEANMVFSLLMGNRVEPRKELIENSASKISIEKL 735
Query: 331 DI 326
DI
Sbjct: 736 DI 737
>sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chloroplastic; Flags: Precursor
Length = 730
Score = 360 bits (924), Expect = 6e-97
Identities = 178/242 (73%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD ++ EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 489 SVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 548
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 549 KDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFF 608
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK+A YC+DD ALK + +P N+SYNIQRFKGLGE
Sbjct: 609 RYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGE 668
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+S+A++ LENL
Sbjct: 669 MMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENL 728
Query: 331 DI 326
DI
Sbjct: 729 DI 730
>ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332641361|gb|AEE74882.1| DNA gyrase subunit B
[Arabidopsis thaliana]
Length = 772
Score = 360 bits (924), Expect = 6e-97
Identities = 178/242 (73%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD ++ EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 531 SVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 590
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 591 KDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFF 650
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK+A YC+DD ALK + +P N+SYNIQRFKGLGE
Sbjct: 651 RYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGE 710
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+S+A++ LENL
Sbjct: 711 MMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENL 770
Query: 331 DI 326
DI
Sbjct: 771 DI 772
>gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabidopsis thaliana]
Length = 657
Score = 360 bits (924), Expect = 6e-97
Identities = 178/242 (73%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD ++ EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 416 SVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 475
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 476 KDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFF 535
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK+A YC+DD ALK + +P N+SYNIQRFKGLGE
Sbjct: 536 RYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGE 595
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+S+A++ LENL
Sbjct: 596 MMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENL 655
Query: 331 DI 326
DI
Sbjct: 656 DI 657
>ref|XP_004252016.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Solanum lycopersicum]
Length = 729
Score = 359 bits (922), Expect = 1e-96
Identities = 180/242 (74%), Positives = 207/242 (85%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S LRSS++PGKLA+CS T+ + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 488 SVLRSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 547
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 548 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFF 607
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALFEEG +YVGVPPLYKVERGK+A YC+DD LK + + +P N+SYNIQRFKGLGE
Sbjct: 608 RYQRALFEEGCIYVGVPPLYKVERGKQAYYCYDDVELKKVQRSFPSNASYNIQRFKGLGE 667
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL ++DA EA+ VF+ LMGS V+ RK+LI+ SAS LE L
Sbjct: 668 MMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSKVDVRKQLIQHSASMINLEQL 727
Query: 331 DI 326
DI
Sbjct: 728 DI 729
>ref|XP_006297063.1| hypothetical protein CARUB_v10013064mg [Capsella rubella]
gi|482565772|gb|EOA29961.1| hypothetical protein
CARUB_v10013064mg [Capsella rubella]
Length = 728
Score = 359 bits (921), Expect = 1e-96
Identities = 178/242 (73%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD ++ EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 487 SVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 546
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 547 KDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFF 606
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK+A YC+DD ALK + +P N+SYNIQRFKGLGE
Sbjct: 607 RYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGE 666
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL I+DA E + VF+ LMG+ V+ RK+LI+S+A++ LENL
Sbjct: 667 MMPAQLWETTMNPDTRILKQLVIEDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENL 726
Query: 331 DI 326
DI
Sbjct: 727 DI 728
>ref|XP_006355766.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Solanum tuberosum]
Length = 729
Score = 358 bits (919), Expect = 2e-96
Identities = 179/242 (73%), Positives = 207/242 (85%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S LRSS++PGKLA+CS T+ + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 488 SVLRSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 547
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 548 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFF 607
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALFEEG +YVGVPPLYKVERGK+A YC+DD L+ + + +P N+SYNIQRFKGLGE
Sbjct: 608 RYQRALFEEGCIYVGVPPLYKVERGKQAYYCYDDVELRKVQRSFPSNASYNIQRFKGLGE 667
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL ++DA EA+ VF+ LMGS V+ RK+LI+ SAS LE L
Sbjct: 668 MMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSKVDVRKQLIQHSASMINLEQL 727
Query: 331 DI 326
DI
Sbjct: 728 DI 729
>ref|XP_002884787.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata] gi|297330627|gb|EFH61046.1| hypothetical protein
ARALYDRAFT_478355 [Arabidopsis lyrata subsp. lyrata]
Length = 657
Score = 358 bits (919), Expect = 2e-96
Identities = 177/242 (73%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD ++ EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 416 SVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 475
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 476 KDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFF 535
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK+A YC+DD ALK + +P N+SYNIQRFKGLGE
Sbjct: 536 RYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPANASYNIQRFKGLGE 595
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL ++DA E + VF+ LMG+ V+ RK+LI+S+A++ LENL
Sbjct: 596 MMPAQLWETTMNPDTRILKQLVVEDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENL 655
Query: 331 DI 326
DI
Sbjct: 656 DI 657
>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
subunit [Nicotiana benthamiana]
Length = 731
Score = 357 bits (917), Expect = 4e-96
Identities = 178/242 (73%), Positives = 207/242 (85%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS T+ + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 490 SVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 549
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 550 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFF 609
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALFEEG +YVGVPPLYKVERGK+ YC+DD LK + + +P N+SYNIQRFKGLGE
Sbjct: 610 RYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNASYNIQRFKGLGE 669
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL ++DA EA+ VF+ LMGS V+ RK+LI++SAS LE L
Sbjct: 670 MMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLIQNSASMMNLEQL 729
Query: 331 DI 326
DI
Sbjct: 730 DI 731
>ref|XP_006407588.1| hypothetical protein EUTSA_v10020150mg [Eutrema salsugineum]
gi|557108734|gb|ESQ49041.1| hypothetical protein
EUTSA_v10020150mg [Eutrema salsugineum]
Length = 729
Score = 356 bits (914), Expect = 8e-96
Identities = 176/242 (72%), Positives = 207/242 (85%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 488 SILKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 547
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 548 KDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFF 607
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK+ YC+DD AL+ ++ +P N+SYNIQRFKGLGE
Sbjct: 608 RYQRALFDAGCIYVGVPPLFKVERGKQEHYCYDDAALQNIIASFPGNASYNIQRFKGLGE 667
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+SSA++ LE L
Sbjct: 668 MMPEQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDARKELIKSSATRINLERL 727
Query: 331 DI 326
DI
Sbjct: 728 DI 729
>gb|EOY08861.1| Dna gyrase b2 isoform 1 [Theobroma cacao]
Length = 726
Score = 353 bits (906), Expect = 7e-95
Identities = 174/242 (71%), Positives = 208/242 (85%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS T+ + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 485 SVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 544
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
+DE AMYKN+EI +LI LG+G +GEDF+K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 545 RDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFF 604
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+EG +YVGVPPLYKVERGK+ YC+DD+ LK + +P N+SYNIQRFKGLGE
Sbjct: 605 RYQRALFDEGCIYVGVPPLYKVERGKQVYYCYDDSDLKRVQSMFPQNASYNIQRFKGLGE 664
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTM+P R LKQL ++DA EA+ VF+ LMG+ V+ RK+LI++SASK L+ L
Sbjct: 665 MMPAQLWETTMDPDQRLLKQLVVEDAAEANMVFSSLMGARVDARKELIQNSASKINLDKL 724
Query: 331 DI 326
DI
Sbjct: 725 DI 726
>ref|XP_002323244.2| DNA topoisomerase 2 family protein [Populus trichocarpa]
gi|550320744|gb|EEF05005.2| DNA topoisomerase 2 family
protein [Populus trichocarpa]
Length = 722
Score = 352 bits (903), Expect = 2e-94
Identities = 173/242 (71%), Positives = 209/242 (86%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 481 SVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 540
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
+DE AMYKN+EI +LI LG+G +GEDF+K+ L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 541 RDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFF 600
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+EG +YVGVPPLYKVERGK+A YCFDD LK + + +P N+SYNIQRFKGLGE
Sbjct: 601 RYQRALFDEGCIYVGVPPLYKVERGKQAYYCFDDAELKKIQRSFPQNASYNIQRFKGLGE 660
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTM+P R LKQL ++DA EA+ VF+ LMG+ V+ RK+LI+++AS +++L
Sbjct: 661 MMPAQLWETTMDPERRVLKQLVVEDAAEANIVFSSLMGTRVDFRKELIQNAASMINVDHL 720
Query: 331 DI 326
DI
Sbjct: 721 DI 722
>gb|EMJ05458.1| hypothetical protein PRUPE_ppa001942mg [Prunus persica]
Length = 738
Score = 352 bits (903), Expect = 2e-94
Identities = 175/242 (72%), Positives = 206/242 (85%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S LRSS++PGKLA+CS T+ + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 497 SVLRSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 556
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K L YHKIIILTDAD+DGAHIRTLLLTFFF
Sbjct: 557 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADIDGAHIRTLLLTFFF 616
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+EG +YVGVPPLYKVERGK+A YC+DD LK L +P N+SYNIQRFKGLGE
Sbjct: 617 RYQRALFDEGYIYVGVPPLYKVERGKQAKYCYDDAELKMLQSSFPPNASYNIQRFKGLGE 676
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP R LK+L ++DA EA+ VF+ LMG+ V+ RK+LI++SAS L+ L
Sbjct: 677 MMPAQLWETTMNPEQRLLKRLGVEDAAEANIVFSSLMGARVDYRKELIKNSASMVNLDQL 736
Query: 331 DI 326
DI
Sbjct: 737 DI 738
>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
putative [Ricinus communis]
Length = 732
Score = 351 bits (900), Expect = 4e-94
Identities = 175/242 (72%), Positives = 205/242 (84%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S LR+S++PGKLA+CS T+ + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 491 SVLRTSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 550
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 551 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFF 610
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQKALFEEG +YVGVPPLYKVERGK+ YC+D+ LK L +P N+SYNIQRFKGLGE
Sbjct: 611 RYQKALFEEGCIYVGVPPLYKVERGKQVYYCYDEAELKKLRSSFPQNASYNIQRFKGLGE 670
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMPLQLWETTM+P R LKQL ++DA EA+ VF+ LMG+ V+ RK+LI+SSA ++ L
Sbjct: 671 MMPLQLWETTMDPEQRLLKQLVVEDAAEANVVFSSLMGARVDVRKELIQSSARAVNIDLL 730
Query: 331 DI 326
DI
Sbjct: 731 DI 732
>ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 350 bits (899), Expect = 5e-94
Identities = 176/242 (72%), Positives = 205/242 (84%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S LRSS++PGKLA+CS + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 478 SVLRSSSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 537
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI++LI ALG+G +GEDF+K+ L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 538 KDEAAMYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFF 597
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQKALF+EG +YVGVPPLYKVERGK+ YC+DD LK + +P N+SYNIQRFKGLGE
Sbjct: 598 RYQKALFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGE 657
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTM+P R LKQL ++DA EA+ VF+ LMG V+ RK+LI+ SAS LE+L
Sbjct: 658 MMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLEHL 717
Query: 331 DI 326
DI
Sbjct: 718 DI 719
>ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 350 bits (899), Expect = 5e-94
Identities = 176/242 (72%), Positives = 205/242 (84%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S LRSS++PGKLA+CS + EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 478 SVLRSSSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 537
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRKN-LNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI++LI ALG+G +GEDF+K+ L YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 538 KDEAAMYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFF 597
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQKALF+EG +YVGVPPLYKVERGK+ YC+DD LK + +P N+SYNIQRFKGLGE
Sbjct: 598 RYQKALFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGE 657
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTM+P R LKQL ++DA EA+ VF+ LMG V+ RK+LI+ SAS LE+L
Sbjct: 658 MMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLEHL 717
Query: 331 DI 326
DI
Sbjct: 718 DI 719
>ref|XP_001785766.1| predicted protein [Physcomitrella patens] gi|162662596|gb|EDQ49430.1|
predicted protein [Physcomitrella patens]
Length = 642
Score = 350 bits (899), Expect = 5e-94
Identities = 172/240 (71%), Positives = 206/240 (85%), Gaps = 1/240 (0%)
Frame = -1
Query: 1042 LRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVERKD 863
L+SS +PGKL++CS TD EIFIVEG+SAGGSAKQGRDRR+QAILPLRGKILN+ERKD
Sbjct: 403 LKSSMLPGKLSDCSCTDPKNSEIFIVEGDSAGGSAKQGRDRRYQAILPLRGKILNIERKD 462
Query: 862 EEAMYKNKEIHDLICALGIGEEGEDFRKNL-NYHKIIILTDADVDGAHIRTLLLTFFFRY 686
+ A+YKN+EI +LI ALG+G +GE+F K+L YHKIIILTDADVDGAHIRTLLLTFFFRY
Sbjct: 463 DAAIYKNQEIQNLILALGLGVKGEEFSKDLLRYHKIIILTDADVDGAHIRTLLLTFFFRY 522
Query: 685 QKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGEMM 506
Q+ALFE G +YVGVPPLYKVERGK+A YCF++ LK LLK +P N+SYNIQRFKGLGEMM
Sbjct: 523 QRALFESGCIYVGVPPLYKVERGKQAHYCFNEADLKNLLKTFPSNASYNIQRFKGLGEMM 582
Query: 505 PLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 326
P QLWETT++P R LK LT++DA EA +F+ LMG VEPRK+LI+++AS+ LENLD+
Sbjct: 583 PQQLWETTLDPTQRMLKLLTLEDAAEASMMFSTLMGDKVEPRKELIQNNASRMKLENLDL 642
>ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|75165162|sp|Q94BZ7.1|GYRBM_ARATH RecName: Full=DNA
gyrase subunit B, mitochondrial; Flags: Precursor
gi|14517374|gb|AAK62578.1| AT3g10270/F14P13_13
[Arabidopsis thaliana] gi|22655426|gb|AAM98305.1|
At3g10270/F14P13_13 [Arabidopsis thaliana]
gi|332003319|gb|AED90702.1| DNA gyrase subunit B
[Arabidopsis thaliana]
Length = 732
Score = 350 bits (899), Expect = 5e-94
Identities = 173/242 (71%), Positives = 205/242 (84%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 491 SVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 550
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 551 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFF 610
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK A YC+DD LK + ++P N+SYNIQRFKGLGE
Sbjct: 611 RYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGE 670
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL +DD EA+ F+ LMG+ V+ RK+LI+++A++ L+ L
Sbjct: 671 MMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRL 730
Query: 331 DI 326
DI
Sbjct: 731 DI 732
>emb|CAC05495.1| DNA gyrase subunit B-like protein [Arabidopsis thaliana]
Length = 760
Score = 350 bits (899), Expect = 5e-94
Identities = 173/242 (71%), Positives = 205/242 (84%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 519 SVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 578
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 579 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFF 638
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK A YC+DD LK + ++P N+SYNIQRFKGLGE
Sbjct: 639 RYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGE 698
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL +DD EA+ F+ LMG+ V+ RK+LI+++A++ L+ L
Sbjct: 699 MMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRL 758
Query: 331 DI 326
DI
Sbjct: 759 DI 760
>ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata] gi|297318973|gb|EFH49395.1| hypothetical protein
ARALYDRAFT_487191 [Arabidopsis lyrata subsp. lyrata]
Length = 729
Score = 350 bits (898), Expect = 6e-94
Identities = 173/242 (71%), Positives = 205/242 (84%), Gaps = 1/242 (0%)
Frame = -1
Query: 1048 SSLRSSAIPGKLANCSETDASKREIFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVER 869
S L+SS++PGKLA+CS TD EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILN+ER
Sbjct: 488 SVLKSSSLPGKLADCSSTDPEASEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER 547
Query: 868 KDEEAMYKNKEIHDLICALGIGEEGEDFRK-NLNYHKIIILTDADVDGAHIRTLLLTFFF 692
KDE AMYKN+EI +LI LG+G +GEDF+K NL YHKIIILTDADVDGAHIRTLLLTFFF
Sbjct: 548 KDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFF 607
Query: 691 RYQKALFEEGVVYVGVPPLYKVERGKKATYCFDDNALKTLLKDYPDNSSYNIQRFKGLGE 512
RYQ+ALF+ G +YVGVPPL+KVERGK A YC+DD LK + ++P N+SYNIQRFKGLGE
Sbjct: 608 RYQRALFDAGCIYVGVPPLFKVERGKHAHYCYDDADLKKITSNFPANASYNIQRFKGLGE 667
Query: 511 MMPLQLWETTMNPATRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENL 332
MMP QLWETTMNP TR LKQL +DD EA+ F+ LMG+ V+ RK+LI+++A++ L+ L
Sbjct: 668 MMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRL 727
Query: 331 DI 326
DI
Sbjct: 728 DI 729