BLASTX nr result
ID: Ephedra27_contig00006530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00006530
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16629.1| unknown [Picea sitchensis] 70 4e-10
ref|WP_022314165.1| dNA gyrase subunit B [Ruminococcus sp. CAG:3... 59 9e-07
ref|YP_007106273.1| DNA gyrase subunit B [Synechococcus sp. PCC ... 59 9e-07
ref|YP_001527982.1| DNA gyrase subunit B [Desulfococcus oleovora... 58 2e-06
ref|NP_394515.1| DNA gyrase subunit B [Thermoplasma acidophilum ... 57 2e-06
gb|AGL45413.1| gyrase B [Cloning vector pNTA] 57 2e-06
gb|AGL45410.1| gyrase B [Cloning vector pDTA] gi|496543768|gb|AG... 57 2e-06
ref|WP_017654781.1| DNA gyrase subunit B [Microchaete sp. PCC 7126] 57 2e-06
ref|WP_009627724.1| DNA gyrase subunit B [Pseudanabaena biceps] ... 57 2e-06
dbj|BAE53571.1| gyrase beta subunit [Thermoplasma acidophilum] 57 2e-06
gb|AFS32754.1| DNA gyrase subunit B [synthetic construct] 57 2e-06
ref|YP_003721785.1| DNA gyrase subunit B ['Nostoc azollae' 0708]... 57 2e-06
ref|XP_001785766.1| predicted protein [Physcomitrella patens] gi... 57 2e-06
ref|WP_019499328.1| DNA gyrase subunit B [Pseudanabaena sp. PCC ... 57 3e-06
sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chlo... 57 3e-06
ref|WP_009457269.1| DNA gyrase subunit B [Fischerella] gi|353543... 57 3e-06
ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana] gi|... 57 3e-06
ref|XP_001780285.1| predicted protein [Physcomitrella patens] gi... 57 3e-06
gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabido... 57 3e-06
ref|XP_006407588.1| hypothetical protein EUTSA_v10020150mg [Eutr... 56 6e-06
>gb|ABR16629.1| unknown [Picea sitchensis]
Length = 737
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRKLKQLT++DA EA+ VF+LLMG+ VEPRK+LIE+SASK +E LDI
Sbjct: 690 TRKLKQLTVEDAAEANMVFSLLMGNRVEPRKELIENSASKISIEKLDI 737
>ref|WP_022314165.1| dNA gyrase subunit B [Ruminococcus sp. CAG:382]
gi|524581484|emb|CDD01475.1| dNA gyrase subunit B
[Ruminococcus sp. CAG:382]
Length = 479
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LK++TIDDA EAD++FTLLMG VEPR++ IE++A KY EN+DI
Sbjct: 434 TRTLKRITIDDAVEADNIFTLLMGDKVEPRRQYIENNA-KY-AENVDI 479
>ref|YP_007106273.1| DNA gyrase subunit B [Synechococcus sp. PCC 7502]
gi|504981693|ref|WP_015168795.1| DNA gyrase subunit B
[Synechococcus sp. PCC 7502] gi|427995443|gb|AFY74138.1|
DNA gyrase, B subunit [Synechococcus sp. PCC 7502]
Length = 646
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LKQ+TI+DA EAD +FT+LMG V PR++ IE+ SK L +LDI
Sbjct: 599 TRTLKQITIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 646
>ref|YP_001527982.1| DNA gyrase subunit B [Desulfococcus oleovorans Hxd3]
gi|501124414|ref|WP_012173524.1| DNA gyrase subunit B
[Desulfococcus oleovorans] gi|158508938|gb|ABW65905.1|
DNA gyrase, B subunit [Desulfococcus oleovorans Hxd3]
Length = 814
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRKL ++TIDDA EAD+VFTLLMG VEPRKK I+ +A + +E LDI
Sbjct: 769 TRKLLKVTIDDAAEADAVFTLLMGDVVEPRKKFIQENALE--VETLDI 814
>ref|NP_394515.1| DNA gyrase subunit B [Thermoplasma acidophilum DSM 1728]
gi|499203926|ref|WP_010901466.1| DNA gyrase subunit B
[Thermoplasma acidophilum] gi|10640369|emb|CAC12183.1|
probable DNA gyrase, subunit B (gyrB) [Thermoplasma
acidophilum]
Length = 641
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRKL Q+TI+DAEEA+ +FT+LMG VEPR+K IE +A EN+D+
Sbjct: 596 TRKLVQVTIEDAEEAERIFTILMGEKVEPRRKFIEENA--VYAENIDL 641
>gb|AGL45413.1| gyrase B [Cloning vector pNTA]
Length = 641
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRKL Q+TI+DAEEA+ +FT+LMG VEPR+K IE +A EN+D+
Sbjct: 596 TRKLVQVTIEDAEEAERIFTILMGEKVEPRRKFIEENA--VYAENIDL 641
>gb|AGL45410.1| gyrase B [Cloning vector pDTA] gi|496543768|gb|AGL45423.1| gyrase B
[Cloning vector pSTA]
Length = 641
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRKL Q+TI+DAEEA+ +FT+LMG VEPR+K IE +A EN+D+
Sbjct: 596 TRKLVQVTIEDAEEAERIFTILMGEKVEPRRKFIEENA--VYAENIDL 641
>ref|WP_017654781.1| DNA gyrase subunit B [Microchaete sp. PCC 7126]
Length = 645
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRK+KQ+ I+DA EAD +FT+LMG V PR++ IE+ SK L +LDI
Sbjct: 598 TRKMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 645
>ref|WP_009627724.1| DNA gyrase subunit B [Pseudanabaena biceps]
gi|443017788|gb|ELS32155.1| DNA gyrase subunit B
[Pseudanabaena biceps PCC 7429]
Length = 646
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LK+LTI+DA EAD +FT+LMG V PR++ IE+ SK + LDI
Sbjct: 599 TRSLKRLTIEDAAEADRIFTILMGDKVAPRREFIETYGSKLAITELDI 646
>dbj|BAE53571.1| gyrase beta subunit [Thermoplasma acidophilum]
Length = 641
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRKL Q+TI+DAEEA+ +FT+LMG VEPR+K IE +A EN+D+
Sbjct: 596 TRKLVQVTIEDAEEAERIFTILMGEKVEPRRKFIEENA--VYAENIDL 641
>gb|AFS32754.1| DNA gyrase subunit B [synthetic construct]
Length = 641
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRKL Q+TI+DAEEA+ +FT+LMG VEPR+K IE +A EN+D+
Sbjct: 596 TRKLVQVTIEDAEEAERIFTILMGEKVEPRRKFIEENA--VYAENIDL 641
>ref|YP_003721785.1| DNA gyrase subunit B ['Nostoc azollae' 0708]
gi|502956702|ref|WP_013191678.1| DNA gyrase subunit B
[Trichormus azollae] gi|298233526|gb|ADI64662.1| DNA
gyrase, B subunit ['Nostoc azollae' 0708]
Length = 645
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TRK+KQ+ I+DA EAD +FT+LMG V PR++ IE+ SK L +LDI
Sbjct: 598 TRKMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI 645
>ref|XP_001785766.1| predicted protein [Physcomitrella patens]
gi|162662596|gb|EDQ49430.1| predicted protein
[Physcomitrella patens]
Length = 642
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = -3
Query: 377 RKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
R LK LT++DA EA +F+ LMG VEPRK+LI+++AS+ LENLD+
Sbjct: 596 RMLKLLTLEDAAEASMMFSTLMGDKVEPRKELIQNNASRMKLENLDL 642
>ref|WP_019499328.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 6802]
Length = 645
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LKQ+TI+DA EAD +FT+LMG V PR++ IE+ K L +LDI
Sbjct: 598 TRTLKQITIEDAAEADRIFTILMGDRVAPRREFIETYGPKLNLTDLDI 645
>sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chloroplastic; Flags: Precursor
Length = 730
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+S+A++ LENLDI
Sbjct: 683 TRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 730
>ref|WP_009457269.1| DNA gyrase subunit B [Fischerella] gi|353543515|gb|EHC12973.1| DNA
gyrase, B subunit [Fischerella sp. JSC-11]
Length = 645
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LKQ+ I+DA EAD +FT+LMG V PR++ IE+ SK L++LDI
Sbjct: 598 TRTLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLKDLDI 645
>ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332641361|gb|AEE74882.1| DNA gyrase subunit B
[Arabidopsis thaliana]
Length = 772
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+S+A++ LENLDI
Sbjct: 725 TRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 772
>ref|XP_001780285.1| predicted protein [Physcomitrella patens]
gi|162668339|gb|EDQ54949.1| predicted protein
[Physcomitrella patens]
Length = 640
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = -3
Query: 377 RKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
R LK LT++DA EA +F+ LMG VEPRK+LI ++AS+ LENLD+
Sbjct: 594 RMLKLLTLEDAAEASMMFSTLMGDKVEPRKELIRTNASRMKLENLDL 640
>gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabidopsis thaliana]
Length = 657
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+S+A++ LENLDI
Sbjct: 610 TRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 657
>ref|XP_006407588.1| hypothetical protein EUTSA_v10020150mg [Eutrema salsugineum]
gi|557108734|gb|ESQ49041.1| hypothetical protein
EUTSA_v10020150mg [Eutrema salsugineum]
Length = 729
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = -3
Query: 380 TRKLKQLTIDDAEEADSVFTLLMGSNVEPRKKLIESSASKYMLENLDI 237
TR LKQL +DDA E + VF+ LMG+ V+ RK+LI+SSA++ LE LDI
Sbjct: 682 TRILKQLVVDDAAETNMVFSSLMGARVDARKELIKSSATRINLERLDI 729