BLASTX nr result
ID: Ephedra27_contig00006465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00006465
(987 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485979.1| PREDICTED: serine/arginine-rich splicing fac... 97 7e-18
gb|ABK25029.1| unknown [Picea sitchensis] 96 3e-17
gb|ABK25831.1| unknown [Picea sitchensis] gi|224284468|gb|ACN399... 95 5e-17
gb|EPS69715.1| hypothetical protein M569_05051 [Genlisea aurea] 94 6e-17
ref|XP_006436154.1| hypothetical protein CICLE_v10032170mg [Citr... 93 1e-16
ref|XP_006436152.1| hypothetical protein CICLE_v10032170mg [Citr... 93 1e-16
gb|EXB88502.1| Serine/arginine-rich splicing factor 4 [Morus not... 91 5e-16
ref|XP_006604540.1| PREDICTED: serine/arginine-rich splicing fac... 91 5e-16
ref|XP_006576996.1| PREDICTED: serine/arginine-rich splicing fac... 91 5e-16
ref|XP_006436157.1| hypothetical protein CICLE_v10032170mg [Citr... 91 5e-16
ref|XP_006436153.1| hypothetical protein CICLE_v10032170mg [Citr... 91 5e-16
ref|XP_002308490.2| hypothetical protein POPTR_0006s23170g [Popu... 91 5e-16
ref|XP_002322837.2| hypothetical protein POPTR_0016s08250g [Popu... 91 5e-16
ref|XP_006843673.1| hypothetical protein AMTR_s00007p00189640 [A... 91 5e-16
gb|EOY18433.1| RNA-binding family protein with retrovirus zinc f... 91 5e-16
gb|EOY18432.1| RNA-binding family protein with retrovirus zinc f... 91 5e-16
gb|EOY18431.1| RNA-binding family protein with retrovirus zinc f... 91 5e-16
gb|EOY18430.1| RNA-binding family protein with retrovirus zinc f... 91 5e-16
gb|EMJ19928.1| hypothetical protein PRUPE_ppa009074mg [Prunus pe... 91 5e-16
ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251... 91 5e-16
>ref|XP_006485979.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X1 [Citrus sinensis]
Length = 340
Score = 97.4 bits (241), Expect = 7e-18
Identities = 80/240 (33%), Positives = 90/240 (37%), Gaps = 10/240 (4%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPKXXXXXXXXXXXXXXXXXXXXXX 808
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 107 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRYVYVHLQYENLLSSCTFFS 166
Query: 807 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEVRGRKRSVNRSYSRSPLRARRDSPD 628
+ V R S R SP
Sbjct: 167 LYRKQLWFRRPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPR 226
Query: 627 IDR-----RGSVDMDMDRRRDISPDMERRRGISPDDERRRTRSPGPDDERRRNRS--PDL 469
R R S R+R +PD ER SP D+ RSP P D R+ N S
Sbjct: 227 DSRSPKRRRNSPPSSKGRKRSPTPD-ER----SPQDQ----RSPSPRDRRQANGSEYSGS 277
Query: 468 RRAKERSP--DLRRAKERSL-DPDRMRERSPDDDRRRVESPDMERRSLSPSDNGNGQRGS 298
R K RSP D ++R+ P RS R P +R + DN RGS
Sbjct: 278 PRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSRSLSPVPRDDRSPIDDDDNHGDPRGS 337
>gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 95.5 bits (236), Expect = 3e-17
Identities = 66/208 (31%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPKXXXXXXXXXXXXXXXXXXXXXX 808
CGNDGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 109 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKSTRRERSVSRSPSRSLSRRRGR 168
Query: 807 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEVRGRKRSVNRSYSRSPLRARRDSPD 628
R R S R+ +S P+
Sbjct: 169 SRSASYNSRSRSYSRSPRSPRTDGRSAVQDEKRSRSRSYSHSPRRARRQS--------PE 220
Query: 627 IDRRGSVDMDMDRRRDISPDMERRRGISPDDERRRTRSPGPDDERRRNRSPDLRR---AK 457
+D R S D + +R SP RR+ SP D ER +R +
Sbjct: 221 MDGRRSSSPSAD-----NASGQRGSRYSPKRNSRRSDSPALDTERASRDIASPQRDSPGR 275
Query: 456 ERSPDLRRAKERSLDPDRMRERSPDDDR 373
+SP + PD M+ +SP R
Sbjct: 276 SQSPAANGKPSHDVSPDTMKNQSPSPMR 303
>gb|ABK25831.1| unknown [Picea sitchensis] gi|224284468|gb|ACN39968.1| unknown
[Picea sitchensis]
Length = 316
Score = 94.7 bits (234), Expect = 5e-17
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CGNDGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 109 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 146
>gb|EPS69715.1| hypothetical protein M569_05051 [Genlisea aurea]
Length = 318
Score = 94.4 bits (233), Expect = 6e-17
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK
Sbjct: 108 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 145
Score = 57.8 bits (138), Expect = 6e-06
Identities = 51/161 (31%), Positives = 65/161 (40%), Gaps = 26/161 (16%)
Frame = -1
Query: 699 RGRKRSVNRSYSRSPLRARRDSPDIDRRGSVDMDMDRRRDISPDMERRRGISPDDERRRT 520
R R S RSYSRS ARR + R VD D SP+++RR P D R+ +
Sbjct: 172 RSRSFSRGRSYSRSRSPARRGRDERKSRSPVD-------DRSPEVKRRSSSPPYDSRKNS 224
Query: 519 ----------RSPGPDDE----------------RRRNRSPDLRRAKERSPDLRRAKERS 418
RSP P R R+RSP ++ RS R++ RS
Sbjct: 225 PTSDGDGPVQRSPSPPPRKTEESPYASNGRRRGSRSRSRSPSPSPSRSRSRSRSRSRSRS 284
Query: 417 LDPDRMRERSPDDDRRRVESPDMERRSLSPSDNGNGQRGSR 295
R R RSP +R VE D +NG RGS+
Sbjct: 285 RSRSRSRSRSPSGERDGVEDLD---------ENGGSPRGSQ 316
>ref|XP_006436154.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|568865232|ref|XP_006485981.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X3 [Citrus sinensis] gi|557538350|gb|ESR49394.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina]
Length = 311
Score = 93.2 bits (230), Expect = 1e-16
Identities = 71/209 (33%), Positives = 80/209 (38%), Gaps = 5/209 (2%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPKXXXXXXXXXXXXXXXXXXXXXX 808
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 107 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSRSRS 166
Query: 807 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEVRGRKRSVNRSYSRSPLRARRDSPD 628
+ R+ S S R + SP
Sbjct: 167 YSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGR------KRSPT 220
Query: 627 IDRRGSVDMDMDRRRDISPDMERRRGISPDDERRRTRSP-----GPDDERRRNRSPDLRR 463
D R D RD SP R ++RSP GP+D R RSP
Sbjct: 221 PDERSPQDQRSPSPRDRRQANGSEYSGSP---RGKSRSPVDDADGPED--RNYRSPPEEN 275
Query: 462 AKERSPDLRRAKERSLDPDRMRERSPDDD 376
+ RS + RSL P +RSP DD
Sbjct: 276 GRSRS------RSRSLSPVPRDDRSPIDD 298
>ref|XP_006436152.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|568865236|ref|XP_006485983.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X5 [Citrus sinensis] gi|557538348|gb|ESR49392.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina]
Length = 270
Score = 93.2 bits (230), Expect = 1e-16
Identities = 71/209 (33%), Positives = 80/209 (38%), Gaps = 5/209 (2%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPKXXXXXXXXXXXXXXXXXXXXXX 808
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 66 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSRSRS 125
Query: 807 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEVRGRKRSVNRSYSRSPLRARRDSPD 628
+ R+ S S R + SP
Sbjct: 126 YSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGR------KRSPT 179
Query: 627 IDRRGSVDMDMDRRRDISPDMERRRGISPDDERRRTRSP-----GPDDERRRNRSPDLRR 463
D R D RD SP R ++RSP GP+D R RSP
Sbjct: 180 PDERSPQDQRSPSPRDRRQANGSEYSGSP---RGKSRSPVDDADGPED--RNYRSPPEEN 234
Query: 462 AKERSPDLRRAKERSLDPDRMRERSPDDD 376
+ RS + RSL P +RSP DD
Sbjct: 235 GRSRS------RSRSLSPVPRDDRSPIDD 257
>gb|EXB88502.1| Serine/arginine-rich splicing factor 4 [Morus notabilis]
Length = 313
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 107 CGLDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 144
>ref|XP_006604540.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X2 [Glycine max]
Length = 285
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 104 CGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPK 141
>ref|XP_006576996.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33 isoform X2
[Glycine max]
Length = 246
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 63 CGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPK 100
>ref|XP_006436157.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|568865230|ref|XP_006485980.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X2 [Citrus sinensis] gi|557538353|gb|ESR49397.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina]
Length = 312
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 107 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 144
>ref|XP_006436153.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|567887266|ref|XP_006436155.1| hypothetical protein
CICLE_v10032170mg [Citrus clementina]
gi|567887268|ref|XP_006436156.1| hypothetical protein
CICLE_v10032170mg [Citrus clementina]
gi|568865234|ref|XP_006485982.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X4 [Citrus sinensis] gi|557538349|gb|ESR49393.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina] gi|557538351|gb|ESR49395.1| hypothetical
protein CICLE_v10032170mg [Citrus clementina]
gi|557538352|gb|ESR49396.1| hypothetical protein
CICLE_v10032170mg [Citrus clementina]
Length = 271
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 66 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
>ref|XP_002308490.2| hypothetical protein POPTR_0006s23170g [Populus trichocarpa]
gi|550336918|gb|EEE92013.2| hypothetical protein
POPTR_0006s23170g [Populus trichocarpa]
Length = 293
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 104 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPK 141
>ref|XP_002322837.2| hypothetical protein POPTR_0016s08250g [Populus trichocarpa]
gi|550321098|gb|EEF04598.2| hypothetical protein
POPTR_0016s08250g [Populus trichocarpa]
Length = 290
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 104 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPK 141
>ref|XP_006843673.1| hypothetical protein AMTR_s00007p00189640 [Amborella trichopoda]
gi|548846041|gb|ERN05348.1| hypothetical protein
AMTR_s00007p00189640 [Amborella trichopoda]
Length = 320
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 108 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 145
>gb|EOY18433.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 4 [Theobroma cacao]
Length = 299
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 108 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 145
>gb|EOY18432.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 3 [Theobroma cacao]
Length = 302
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 108 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 145
>gb|EOY18431.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 2 [Theobroma cacao]
Length = 261
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 67 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 104
>gb|EOY18430.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 1 [Theobroma cacao]
Length = 304
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 108 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 145
>gb|EMJ19928.1| hypothetical protein PRUPE_ppa009074mg [Prunus persica]
Length = 307
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 107 CGLDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 144
>ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 91.3 bits (225), Expect = 5e-16
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1
Query: 987 CGNDGHWARDCKAGDWKNKCYRCGERGHIERNCPNSPK 874
CG DGHWARDCKAGDWKNKCYRCGERGHIERNC NSPK
Sbjct: 107 CGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 144
Score = 61.6 bits (148), Expect = 4e-07
Identities = 50/143 (34%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Frame = -1
Query: 699 RGRKRSVNRSYSRSPLRAR-RDSPDIDRRGSVDMDMDRRRDISPDMERRRGISPDDER-- 529
R R RS +RSYSRS ++ R SP +R+ S + RR SP D R
Sbjct: 162 RSRSRSRSRSYSRSRSYSQPRSSP--------------KRERSAERLERRSRSPHDSRSP 207
Query: 528 -RRTRSPGPDDERRRNRSPDLRRAKERSPDLRRAKERS-----LDPDRMRERSPDDDRRR 367
RR SP P R+R+ +PD R KERSP R K+ + D R++ RSP D R
Sbjct: 208 KRRKASPPPSKGRKRSPTPDERSPKERSPSPRDRKQTTNGSDYSDSPRVKSRSPALDAER 267
Query: 366 VESPDMERRSLSPSDNGNGQRGS 298
D R +NG+ + S
Sbjct: 268 DSPRDRNYRRSPDEENGHSRSPS 290