BLASTX nr result

ID: Ephedra27_contig00006354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006354
         (539 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77738.1| unknown [Picea sitchensis]                              98   1e-18
gb|AFG62695.1| hypothetical protein 0_9092_01, partial [Pinus ta...    97   2e-18
gb|AEW07692.1| hypothetical protein 0_9092_01, partial [Pinus ra...    97   2e-18
ref|XP_006858931.1| hypothetical protein AMTR_s00068p00075130 [A...    57   4e-06

>gb|ADE77738.1| unknown [Picea sitchensis]
          Length = 325

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/66 (72%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -3

Query: 534 SLLSEFTPPLLKHALHIVNLNKLWSKFKFSKRGNFQ-GAKNARVWASLASVSLGKGPVNR 358
           + LSE TP +LKHALH++NLN++W + +FSK  NFQ GAKNARVWASLASVSLGKGPVNR
Sbjct: 258 AFLSENTPLILKHALHMLNLNRIWCRLEFSKTRNFQEGAKNARVWASLASVSLGKGPVNR 317

Query: 357 AGSSNE 340
            GSS+E
Sbjct: 318 PGSSSE 323


>gb|AFG62695.1| hypothetical protein 0_9092_01, partial [Pinus taeda]
           gi|383160344|gb|AFG62700.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160360|gb|AFG62708.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
          Length = 138

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/66 (74%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -3

Query: 534 SLLSEFTPPLLKHALHIVNLNKLWSKFKFSKRGNFQ-GAKNARVWASLASVSLGKGPVNR 358
           +LLSE TP +LKHALH++NLN++W + KFSK  NFQ GAKNARVWASLASVSLGKGPV+R
Sbjct: 71  ALLSENTPLILKHALHMLNLNRIWCRLKFSKTRNFQEGAKNARVWASLASVSLGKGPVHR 130

Query: 357 AGSSNE 340
            GSS E
Sbjct: 131 PGSSCE 136


>gb|AEW07692.1| hypothetical protein 0_9092_01, partial [Pinus radiata]
           gi|383160330|gb|AFG62693.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160332|gb|AFG62694.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160336|gb|AFG62696.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160338|gb|AFG62697.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160340|gb|AFG62698.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160342|gb|AFG62699.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160346|gb|AFG62701.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160348|gb|AFG62702.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160350|gb|AFG62703.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160352|gb|AFG62704.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160354|gb|AFG62705.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160356|gb|AFG62706.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
           gi|383160358|gb|AFG62707.1| hypothetical protein
           0_9092_01, partial [Pinus taeda]
          Length = 138

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/66 (74%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -3

Query: 534 SLLSEFTPPLLKHALHIVNLNKLWSKFKFSKRGNFQ-GAKNARVWASLASVSLGKGPVNR 358
           +LLSE TP +LKHALH++NLN++W + KFSK  NFQ GAKNARVWASLASVSLGKGPV+R
Sbjct: 71  ALLSENTPLILKHALHMLNLNRIWCRLKFSKTRNFQEGAKNARVWASLASVSLGKGPVHR 130

Query: 357 AGSSNE 340
            GSS E
Sbjct: 131 PGSSCE 136


>ref|XP_006858931.1| hypothetical protein AMTR_s00068p00075130 [Amborella trichopoda]
           gi|548863043|gb|ERN20398.1| hypothetical protein
           AMTR_s00068p00075130 [Amborella trichopoda]
          Length = 202

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
 Frame = -3

Query: 507 LLKHALHIVNLNKLWSKFKFSKRGNFQ-GAKNARVWA-SLASVSLGKGPVNRAGSS 346
           L++ ALH+ N+ ++WS+ +  K  NF+ GAKNARVWA SLASVS+G+    R+ +S
Sbjct: 143 LVERALHVFNIKRVWSRLRLCKTRNFEKGAKNARVWASSLASVSIGEASSTRSSAS 198


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