BLASTX nr result

ID: Ephedra27_contig00006257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00006257
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT05476.1| ADP-ribosylation factor GTPase-activating protein...    59   5e-07
gb|EMS65840.1| ADP-ribosylation factor GTPase-activating protein...    59   5e-07
gb|ABK23324.1| unknown [Picea sitchensis]                              59   9e-07
ref|XP_002967849.1| hypothetical protein SELMODRAFT_169243 [Sela...    55   1e-05

>gb|EMT05476.1| ADP-ribosylation factor GTPase-activating protein AGD12 [Aegilops
           tauschii]
          Length = 531

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/53 (50%), Positives = 43/53 (81%)
 Frame = +3

Query: 54  DREIGRIHASRENCLVNDSILLLTSKGVKQDLHLKLKDVESGELFVELYWAHV 212
           D +IGR   +R+NCL++DSI+ ++S  VKQ+++LKL++VESGE+ +EL WA +
Sbjct: 478 DMQIGRWFMTRDNCLLSDSIVNISSGKVKQEVYLKLQNVESGEMELELEWARL 530


>gb|EMS65840.1| ADP-ribosylation factor GTPase-activating protein AGD12 [Triticum
           urartu]
          Length = 337

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/53 (50%), Positives = 43/53 (81%)
 Frame = +3

Query: 54  DREIGRIHASRENCLVNDSILLLTSKGVKQDLHLKLKDVESGELFVELYWAHV 212
           D +IGR   +R+NCL++DSI+ ++S  VKQ+++LKL++VESGE+ +EL WA +
Sbjct: 284 DMQIGRWFMTRDNCLLSDSIVNISSGKVKQEVYLKLQNVESGEMELELEWARL 336


>gb|ABK23324.1| unknown [Picea sitchensis]
          Length = 171

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
 Frame = +3

Query: 6   LTAAAKVYERT-----KPHDTDREIGRIHASRENCLVNDSILLLTSKGVKQDLHLKLKDV 170
           +T A K ++ T     + H   +EIGR+ AS+ + LV DS +L     V+Q+LHLKL D 
Sbjct: 97  VTIAMKYHKETTNNNMRDHKKVKEIGRVLASQHSELVKDSPILCKGGKVQQNLHLKLNDA 156

Query: 171 ESGELFVELYWAHV 212
           +SGE+ +EL W H+
Sbjct: 157 KSGEIEIELTWVHI 170


>ref|XP_002967849.1| hypothetical protein SELMODRAFT_169243 [Selaginella moellendorffii]
           gi|300164587|gb|EFJ31196.1| hypothetical protein
           SELMODRAFT_169243 [Selaginella moellendorffii]
          Length = 315

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
 Frame = +3

Query: 6   LTAAAKVYERTKPHDTDR----EIGRIHASRENCLVNDSILLLTSKGVKQDLHLKLKDVE 173
           + AAA V E       D     +IGR  A+ EN LV+DS++ L    +KQDL +KL++VE
Sbjct: 241 IVAAASVLEEAMEDQIDDPGEVQIGRCLATAENALVSDSVIRLVGGQIKQDLAVKLQNVE 300

Query: 174 SGELFVELYW 203
           SGE+ +EL W
Sbjct: 301 SGEVQLELEW 310


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