BLASTX nr result
ID: Ephedra27_contig00006182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00006182
(1487 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 86 4e-14
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 81 1e-12
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 79 7e-12
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu... 77 2e-11
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 76 3e-11
ref|XP_004141560.1| PREDICTED: uncharacterized protein LOC101208... 75 6e-11
ref|XP_002331096.1| predicted protein [Populus trichocarpa] 75 7e-11
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A... 73 3e-10
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5... 73 4e-10
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera] 72 6e-10
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 70 2e-09
gb|AFW58318.1| hypothetical protein ZEAMMB73_385077 [Zea mays] 70 2e-09
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852... 70 2e-09
ref|XP_002447880.1| hypothetical protein SORBIDRAFT_06g017380 [S... 67 2e-08
ref|XP_006478194.1| PREDICTED: regulator of nonsense transcripts... 64 2e-07
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts... 63 3e-07
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 63 3e-07
ref|XP_006441556.1| hypothetical protein CICLE_v10019695mg [Citr... 63 3e-07
ref|XP_006441553.1| hypothetical protein CICLE_v10019695mg [Citr... 63 3e-07
ref|XP_004499563.1| PREDICTED: regulator of nonsense transcripts... 61 1e-06
>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
gi|550312328|gb|ERP48419.1| hypothetical protein
POPTR_0022s00460g [Populus trichocarpa]
Length = 511
Score = 85.9 bits (211), Expect = 4e-14
Identities = 75/224 (33%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Frame = -3
Query: 1464 QSLSLQAEHQNQTPFVHRDIRKSF---------------DEAATNDLHAVPIIAEKPDRS 1330
QS +Q+E Q QT + +D R D+ NDLH P EK +R
Sbjct: 326 QSSGVQSEPQMQTSNLEKDKRPPRPPHALVLKDANGTPDDKVVGNDLHGFP--NEKQERR 383
Query: 1329 IKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAHASSEVTESDEASVIDSTGVTS 1150
+N+ RPDR +WT RR + ++E S +A+ S T
Sbjct: 384 TRNKDRPDRVVWTLRRSEGSYASDESLSS-------SAYLS-----------------TQ 419
Query: 1149 PGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQGSARI--TSGDNGIHRQILRR- 979
GF SS N G++K++ LR G+ + GS R +S DNG H+ RR
Sbjct: 420 SGFDSS----------QVNHGDVKADTLNLRSGEVKALGSGRSNHSSLDNGSHKHSGRRG 469
Query: 978 -PVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQVWVAVQKPGS 856
P ++ DGS E KS KRGGASG+G EKQVWV GS
Sbjct: 470 PPHPVRDADGST--VEGKSLKRGGASGYGSHEKQVWVQKSSSGS 511
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 80.9 bits (198), Expect = 1e-12
Identities = 75/234 (32%), Positives = 104/234 (44%), Gaps = 22/234 (9%)
Frame = -3
Query: 1485 KDIQQSPQSLSLQAEHQNQTPFVHRDIRK----------------SFDEAATNDLHAVPI 1354
KD +QS QS Q E Q+Q + ++ R D+ ND+H+
Sbjct: 326 KDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHS--F 382
Query: 1353 IAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAHASSEVTESDEASV 1174
++EK D+ +N+ RPDR +WT RR++G +HAS E S +
Sbjct: 383 VSEKQDKRTRNKDRPDRGVWTPLRRSDG-----------------SHASDESLSSSASQP 425
Query: 1173 IDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQGSAR--ITSGDNGI 1000
TS F + GEM+S+ + R G+ + GS R ++ DNG
Sbjct: 426 ------TSSDFPEG------------SHGEMRSDMSNARSGEVKALGSGRGGHSALDNGS 467
Query: 999 HRQILRRPVGQ--KEVDGSVNGSEAKSSKRGGASGHG--EKQVWVAVQKPGSNP 850
H+ RR K+ DGS SE K SKRG A G+G EKQVW VQK S P
Sbjct: 468 HKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVW--VQKSSSGP 519
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 78.6 bits (192), Expect = 7e-12
Identities = 62/185 (33%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Frame = -3
Query: 1398 SFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGA 1219
S D+ NDLH+ EK +R +N+ RPDR WT RR + ++E S S +
Sbjct: 369 SDDKVIVNDLHS-----EKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLS 423
Query: 1218 AHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRI 1039
A SSE N G+ K + + +R G+ +
Sbjct: 424 AVDSSE----------------------------------GNLGDGKFDLSNMRSGEVKA 449
Query: 1038 QGSARIT--SGDNGIHRQILRRPVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQVWVAV 871
G R + S DNG HR I RR + DGS SE K +RGGASG+G EKQVWV
Sbjct: 450 VGGGRSSHSSVDNGSHRHIGRRGPTHVKDDGSPVMSEGKPLRRGGASGYGSHEKQVWVQK 509
Query: 870 QKPGS 856
GS
Sbjct: 510 SSSGS 514
>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
gi|550341819|gb|ERP62848.1| hypothetical protein
POPTR_0004s23450g [Populus trichocarpa]
Length = 520
Score = 76.6 bits (187), Expect = 2e-11
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Frame = -3
Query: 1392 DEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAH 1213
D+ NDLH P EK ++ +N+ RPDR +WT RR++G ++
Sbjct: 374 DKVVGNDLHGFP--NEKQEKRTRNKDRPDRGVWTPLRRSDG-----------------SY 414
Query: 1212 ASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQG 1033
AS DE+ + ++ T F SS N G++K + LR G+ ++ G
Sbjct: 415 AS------DESLLSSASQSTQSVFDSS----------QGNHGDVKVDSLNLRSGEVKVLG 458
Query: 1032 SAR--ITSGDNGIHRQILRRPVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQVWV 877
S R +S DNG H+ RR D + EAK+ KRGG+SG+G EKQVWV
Sbjct: 459 SGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAKTPKRGGSSGYGSHEKQVWV 514
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 76.3 bits (186), Expect = 3e-11
Identities = 61/185 (32%), Positives = 80/185 (43%), Gaps = 4/185 (2%)
Frame = -3
Query: 1398 SFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGA 1219
S D+ NDLH+ EK +R +N+ RPDR WT RR + ++E S S +
Sbjct: 369 SDDKVIVNDLHS-----EKQERRTRNKDRPDRAAWTLRRSDGSYQSDESLSSSASQLSLS 423
Query: 1218 AHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRI 1039
A SSE N G+ K + + +R G+ +
Sbjct: 424 AVDSSE----------------------------------GNLGDGKFDLSNMRSGEVKA 449
Query: 1038 QGSARIT--SGDNGIHRQILRRPVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQVWVAV 871
G R + S DNG HR I RR + D S SE K +RGGASG+G EKQVWV
Sbjct: 450 VGGGRSSHSSVDNGSHRHIGRRGPTHVKDDSSPVMSEGKPLRRGGASGYGSHEKQVWVQK 509
Query: 870 QKPGS 856
GS
Sbjct: 510 SSSGS 514
>ref|XP_004141560.1| PREDICTED: uncharacterized protein LOC101208317 [Cucumis sativus]
gi|449517953|ref|XP_004166008.1| PREDICTED:
uncharacterized LOC101208317 [Cucumis sativus]
Length = 506
Score = 75.5 bits (184), Expect = 6e-11
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Frame = -3
Query: 1404 RKSFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQ 1225
R S ++ + +LH + +EK ++ I+N+ RPDR +W R R++
Sbjct: 359 RASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSD---------------- 402
Query: 1224 GAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDS 1045
+ V++ +E+SV S+ + S A +GEMK + R GD
Sbjct: 403 ------ASVSQLEESSVPQSSHLLSDSVE-------------AFRGEMKEDIHGSRTGDV 443
Query: 1044 RIQGSARITSGDNGIHRQILRRPVGQ-KEVDGSVNGSEAKSSKRGGASGHGEKQVWVAVQ 868
S R +S +NG R + RR G + DGS+N +E K SKRG A GH EKQVWV
Sbjct: 444 TTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH-EKQVWVQKS 502
Query: 867 KPGS 856
GS
Sbjct: 503 SSGS 506
>ref|XP_002331096.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 75.1 bits (183), Expect = 7e-11
Identities = 59/174 (33%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Frame = -3
Query: 1392 DEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAH 1213
D+ NDLH P EK +R +N+ RPDR +WT RR + ++E S +A+
Sbjct: 30 DKVVGNDLHGFP--NEKQERRTRNKDRPDRVVWTLRRSEGSYASDESLSS-------SAY 80
Query: 1212 ASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQG 1033
S T GF SS N G++K++ LR G+ + G
Sbjct: 81 LS-----------------TQSGFDSS----------QVNHGDVKADTLNLRSGEVKALG 113
Query: 1032 SARI--TSGDNGIHRQILRR--PVGQKEVDGSVNGSEAKSSKRGGASGHGEKQV 883
S R +S DNG H+ RR P ++ DGS E KS KRGGASG+G +V
Sbjct: 114 SGRSNHSSLDNGSHKHSGRRGPPHPVRDADGST--VEGKSLKRGGASGYGSHEV 165
>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
gi|548862693|gb|ERN20051.1| hypothetical protein
AMTR_s00071p00188270 [Amborella trichopoda]
Length = 599
Score = 73.2 bits (178), Expect = 3e-10
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Frame = -3
Query: 1410 DIRKSFDEAAT-NDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIIS 1234
D +K+ D+ T ND + + EK ++ +N+ RPDR +WT RR++G + Q
Sbjct: 394 DPKKALDQKITGNDSYGLVPANEKQEKRTRNKDRPDRAVWTPLRRSDGIHTVDESQMTSD 453
Query: 1233 GTQGAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTY--------------- 1099
+ ++A E+ D+ D G+ S +S G+ + L +
Sbjct: 454 SLEKLSNA-QELKLGDDTEECD--GLGSNASSSMGKSRTSDLGYHNSRSGRGASSSSSEH 510
Query: 1098 -ANQGEMKSE-KALLRMGDSRIQGSAR--ITSGDNGIHRQILRR--PVGQKEVDGSVNGS 937
NQG+ K + + R + + QG+ R S +NG HR RR G K+ DGS+N
Sbjct: 511 SLNQGDTKFDTSSASRSLEMKTQGTGRSSTVSVENGSHRHAGRRSSSTGLKDADGSMNLP 570
Query: 936 EAKSSKRGGASGHG--EKQVWVAVQKPGS 856
+ K KRGG +G EKQ+W VQK G+
Sbjct: 571 DGKPVKRGGIPSYGAHEKQIW--VQKSGT 597
>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
Smg-4/UPF3 family protein [Populus trichocarpa]
Length = 527
Score = 72.8 bits (177), Expect = 4e-10
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Frame = -3
Query: 1392 DEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAH 1213
D+ NDLH P EK ++ +N+ RPDR +WT RR++G ++
Sbjct: 374 DKVVGNDLHGFP--NEKQEKRTRNKDRPDRGVWTPLRRSDG-----------------SY 414
Query: 1212 ASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQG 1033
AS DE+ + ++ T F SS N G++K + LR G+ ++ G
Sbjct: 415 AS------DESLLSSASQSTQSVFDSS----------QGNHGDVKVDSLNLRSGEVKVLG 458
Query: 1032 SAR--ITSGDNGIHRQILRRPVGQKEVDGSVNGSEAKSSKRGGASGHG---------EKQ 886
S R +S DNG H+ RR D + EAK+ KRGG+SG+G +KQ
Sbjct: 459 SGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAKTPKRGGSSGYGSHEVCSLDSQKQ 518
Query: 885 VWV 877
VWV
Sbjct: 519 VWV 521
>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
Length = 304
Score = 72.0 bits (175), Expect = 6e-10
Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Frame = -3
Query: 1485 KDIQQSPQSLSLQAEHQNQTPFVHRDIRK----------------SFDEAATNDLHAVPI 1354
KD +QS QS Q E Q+Q + ++ R D+ ND+H+
Sbjct: 71 KDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHS--F 127
Query: 1353 IAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAHASSEVTESDEASV 1174
++EK D+ +N+ RPDR +WT RR++G +HA SDE+
Sbjct: 128 VSEKQDKRTRNKDRPDRGVWTPLRRSDG-----------------SHA------SDESLS 164
Query: 1173 IDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQGSAR--ITSGDNGI 1000
++ TS F + GEM+S+ + R G+ + GS R ++ DNG
Sbjct: 165 SSASQPTSSDFPE------------GSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGS 212
Query: 999 HRQILRR--PVGQKEVDGSVNGSEAKSSKRGGASGHGEKQVWVAVQ 868
H+ RR K+ DGS SE K SKRG A G+G + + A++
Sbjct: 213 HKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEEFSALE 258
>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
Length = 514
Score = 70.5 bits (171), Expect = 2e-09
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 18/228 (7%)
Frame = -3
Query: 1485 KDIQQSPQSLSLQAEHQNQTPFVHRDIRK----------------SFDEAATNDLHAVPI 1354
KD +Q+ QS +Q+E Q +T + +D R S D+ NDLH
Sbjct: 328 KDARQN-QSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG--- 383
Query: 1353 IAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAHASSEVTESDEASV 1174
+EKP+R +N+ RPDR +WT RR + ++E S S +Q A +
Sbjct: 384 -SEKPERRCRNKDRPDRGVWTLRRSDGSYASDESMSS--SASQSALIPLDPLE------- 433
Query: 1173 IDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQGSARITSGDNGIHR 994
TY G+ K + + +R + GS R +S DNG H
Sbjct: 434 ----------------------GTY---GDTKVDLSNVRSVQVKTVGSGRNSSLDNGSHN 468
Query: 993 QILRRPVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQVWVAVQKPGS 856
+ + R DGS S+ K KRG A+G+G EKQVWV GS
Sbjct: 469 KHVSR--RGAVADGSSVMSDGKPGKRGCAAGYGSHEKQVWVQKSSSGS 514
>gb|AFW58318.1| hypothetical protein ZEAMMB73_385077 [Zea mays]
Length = 503
Score = 70.5 bits (171), Expect = 2e-09
Identities = 64/186 (34%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Frame = -3
Query: 1404 RKSFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQ 1225
R FDE A N LH I EK +R +NR RPDR +W ARR S +
Sbjct: 357 RSHFDEKA-NHLHGSVPIGEKVERHARNRDRPDRGVWAARRYDK------------STSA 403
Query: 1224 GAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDS 1045
G++H SS ++ D N L G+ K+ D+
Sbjct: 404 GSSHPSSSEFPQMQSHSGD-----------------NILQLADGHGDRKT--------DT 438
Query: 1044 RIQGSARITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAKSSKRGGAS-GHGEKQVWVA 874
R QG +R +NG HR RR P G KE + S + +AK+SKRG AS G E+QVWV
Sbjct: 439 RGQGGSRGVPVENG-HRHANRRGLPRGPKETEISASVPDAKNSKRGSASYGAHERQVWVQ 497
Query: 873 VQKPGS 856
GS
Sbjct: 498 KSSSGS 503
>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
Length = 322
Score = 70.5 bits (171), Expect = 2e-09
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Frame = -3
Query: 1485 KDIQQSPQSLSLQAEHQNQTPFVHRDIRK----------------SFDEAATNDLHAVPI 1354
KD +QS QS Q E Q+Q + ++ R D+ ND+H+
Sbjct: 115 KDARQS-QSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHS--F 171
Query: 1353 IAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAHASSEVTESDEASV 1174
++EK D+ +N+ RPDR +WT RR++G +HA SDE+
Sbjct: 172 VSEKQDKRTRNKDRPDRGVWTPLRRSDG-----------------SHA------SDESLS 208
Query: 1173 IDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQGSAR--ITSGDNGI 1000
++ TS F + GEM+S+ + R G+ + GS R ++ DNG
Sbjct: 209 SSASQPTSSDFPE------------GSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGS 256
Query: 999 HRQILRR--PVGQKEVDGSVNGSEAKSSKRGGASGHGEKQ 886
H+ RR K+ DGS SE K SKRG A G+G +
Sbjct: 257 HKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 296
>ref|XP_002447880.1| hypothetical protein SORBIDRAFT_06g017380 [Sorghum bicolor]
gi|241939063|gb|EES12208.1| hypothetical protein
SORBIDRAFT_06g017380 [Sorghum bicolor]
Length = 504
Score = 67.4 bits (163), Expect = 2e-08
Identities = 65/191 (34%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Frame = -3
Query: 1419 VHRDIRKSFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSI 1240
V R FDE TN LH I EK +R +NR RPDR +W RR +
Sbjct: 353 VENSERSHFDEK-TNHLHGSAPIGEKVERHARNRDRPDRGVWAPRR----------YDKS 401
Query: 1239 ISGTQGAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALL 1060
SG G +HASS SD + +G N G+ K+
Sbjct: 402 TSG--GGSHASS----SDFPQIQSHSG-------------DNVSQIADGHGDRKT----- 437
Query: 1059 RMGDSRIQGSARITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAKSSKRGGAS-GHGEK 889
D+R G +R +NG HR RR P G KE + S + + K+SKRG AS G E+
Sbjct: 438 ---DTRGHGGSRGVPVENG-HRHANRRGPPRGPKETEISASVPDGKNSKRGSASYGAHER 493
Query: 888 QVWVAVQKPGS 856
QVWV GS
Sbjct: 494 QVWVQKSSSGS 504
>ref|XP_006478194.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Citrus sinensis] gi|568848838|ref|XP_006478195.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Citrus sinensis]
Length = 523
Score = 63.5 bits (153), Expect = 2e-07
Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = -3
Query: 1404 RKSFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQ 1225
R S D A LH ++EK ++ +N+ RPDR +WT RR S +S
Sbjct: 380 RSSDDRFARKVLHGSGAVSEKQEKRTRNKDRPDRVVWTPRR------------SDVSQAN 427
Query: 1224 GAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDS 1045
G +SS+ T+ + DS VT +GEMK + + S
Sbjct: 428 GERLSSSQPTQ----LLSDSVEVT--------------------RGEMKDDMSY----GS 459
Query: 1044 RIQGSARITSGDNGIHRQILRRPVGQ-KEVDGSVNGSEAKSSKRGGASGHG--EKQVWVA 874
+ A TSG G HR RR + DG +N E KSSKR GA+G G EKQVW+
Sbjct: 460 KTVDIAAPTSG--GSHRHNGRRAATNITKDDGCINTIEGKSSKRRGAAGSGGNEKQVWIQ 517
Query: 873 VQKPG 859
G
Sbjct: 518 KSSSG 522
>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
[Solanum tuberosum]
Length = 482
Score = 63.2 bits (152), Expect = 3e-07
Identities = 60/183 (32%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Frame = -3
Query: 1392 DEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAH 1213
D+ N+ H V I EK +R +NR RPDR +W RRA
Sbjct: 339 DKVVGNEKHVVHI--EKQERRSRNRDRPDRGVWAPLRRA--------------------- 375
Query: 1212 ASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQG 1033
+S +A S G S G S ++ R F++ QGE+K++ + R + R G
Sbjct: 376 ------DSSQA----SNGSLSSGIPQSSQV-REFVE--GGQGELKNDLPIARGTEFRPIG 422
Query: 1032 SAR--ITSGDNGIHRQILRRPVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQVWVAVQK 865
S R +S DNG ++ RR G ++V G+ G E K K+GG S + EKQVWV
Sbjct: 423 SGRNSHSSADNGNYKHGGRR--GLRDVAGTSIG-EGKPVKKGGTSAYSSLEKQVWVQKSS 479
Query: 864 PGS 856
GS
Sbjct: 480 SGS 482
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X3 [Solanum
tuberosum]
Length = 508
Score = 63.2 bits (152), Expect = 3e-07
Identities = 60/183 (32%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Frame = -3
Query: 1392 DEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQGAAH 1213
D+ N+ H V I EK +R +NR RPDR +W RRA
Sbjct: 365 DKVVGNEKHVVHI--EKQERRSRNRDRPDRGVWAPLRRA--------------------- 401
Query: 1212 ASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDSRIQG 1033
+S +A S G S G S ++ R F++ QGE+K++ + R + R G
Sbjct: 402 ------DSSQA----SNGSLSSGIPQSSQV-REFVE--GGQGELKNDLPIARGTEFRPIG 448
Query: 1032 SAR--ITSGDNGIHRQILRRPVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQVWVAVQK 865
S R +S DNG ++ RR G ++V G+ G E K K+GG S + EKQVWV
Sbjct: 449 SGRNSHSSADNGNYKHGGRR--GLRDVAGTSIG-EGKPVKKGGTSAYSSLEKQVWVQKSS 505
Query: 864 PGS 856
GS
Sbjct: 506 SGS 508
>ref|XP_006441556.1| hypothetical protein CICLE_v10019695mg [Citrus clementina]
gi|557543818|gb|ESR54796.1| hypothetical protein
CICLE_v10019695mg [Citrus clementina]
Length = 527
Score = 63.2 bits (152), Expect = 3e-07
Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = -3
Query: 1404 RKSFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQ 1225
R S D A LH ++EK ++ +N+ RPDR +WT RR S +S
Sbjct: 384 RSSDDRFARKVLHGSGAVSEKQEKRTRNKDRPDRVVWTPRR------------SDVSQAN 431
Query: 1224 GAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDS 1045
G +SS+ T+ + DS VT +GEMK + + S
Sbjct: 432 GERLSSSQPTQ----LLSDSVEVT--------------------RGEMKDDMSY----GS 463
Query: 1044 RIQGSARITSGDNGIHRQILRRPVGQ-KEVDGSVNGSEAKSSKRGGASGHG--EKQVWVA 874
+ A TSG G HR RR + DG +N E KSSKR GA+G G EKQVW+
Sbjct: 464 KTVDIAAPTSG--GSHRHNGRRAATNITKDDGCINMIEGKSSKRRGAAGSGGNEKQVWIQ 521
Query: 873 VQKPG 859
G
Sbjct: 522 KSSSG 526
>ref|XP_006441553.1| hypothetical protein CICLE_v10019695mg [Citrus clementina]
gi|567898132|ref|XP_006441554.1| hypothetical protein
CICLE_v10019695mg [Citrus clementina]
gi|567898134|ref|XP_006441555.1| hypothetical protein
CICLE_v10019695mg [Citrus clementina]
gi|557543815|gb|ESR54793.1| hypothetical protein
CICLE_v10019695mg [Citrus clementina]
gi|557543816|gb|ESR54794.1| hypothetical protein
CICLE_v10019695mg [Citrus clementina]
gi|557543817|gb|ESR54795.1| hypothetical protein
CICLE_v10019695mg [Citrus clementina]
Length = 523
Score = 63.2 bits (152), Expect = 3e-07
Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = -3
Query: 1404 RKSFDEAATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIISGTQ 1225
R S D A LH ++EK ++ +N+ RPDR +WT RR S +S
Sbjct: 380 RSSDDRFARKVLHGSGAVSEKQEKRTRNKDRPDRVVWTPRR------------SDVSQAN 427
Query: 1224 GAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRMGDS 1045
G +SS+ T+ + DS VT +GEMK + + S
Sbjct: 428 GERLSSSQPTQ----LLSDSVEVT--------------------RGEMKDDMSY----GS 459
Query: 1044 RIQGSARITSGDNGIHRQILRRPVGQ-KEVDGSVNGSEAKSSKRGGASGHG--EKQVWVA 874
+ A TSG G HR RR + DG +N E KSSKR GA+G G EKQVW+
Sbjct: 460 KTVDIAAPTSG--GSHRHNGRRAATNITKDDGCINMIEGKSSKRRGAAGSGGNEKQVWIQ 517
Query: 873 VQKPG 859
G
Sbjct: 518 KSSSG 522
>ref|XP_004499563.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X6
[Cicer arietinum] gi|502127107|ref|XP_004499564.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X7 [Cicer arietinum]
gi|502127109|ref|XP_004499565.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X8 [Cicer
arietinum]
Length = 535
Score = 60.8 bits (146), Expect = 1e-06
Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 5/190 (2%)
Frame = -3
Query: 1410 DIRKSFDEA-ATNDLHAVPIIAEKPDRSIKNRGRPDRPMWTARRRANGFGNEEGFQSIIS 1234
D +++ DE DLH + I+ +K +R +N+ RPDR +W RR++ S
Sbjct: 382 DSKRALDEKFIRRDLHGLSIVGDKTERRTRNKDRPDRGVWAPLRRSD------------S 429
Query: 1233 GTQGAAHASSEVTESDEASVIDSTGVTSPGFTSSGRINRNFLDTYANQGEMKSEKALLRM 1054
G H+SS + ES ++ G S R GE
Sbjct: 430 SPSGNEHSSSSLAESTLSNPESVEGEVKENVYSGNR-----------TGEF--------- 469
Query: 1053 GDSRIQGSARITSGDNGIHRQILRR--PVGQKEVDGSVNGSEAKSSKRGGASGHG--EKQ 886
S G +S +NG R RR P K+ D +V+ SE K SK+ G +GH EKQ
Sbjct: 470 --SASSGGRSSSSVENGSQRNFTRRGAPYTVKD-DCAVSLSEGKLSKK-GVAGHSTHEKQ 525
Query: 885 VWVAVQKPGS 856
VWV GS
Sbjct: 526 VWVQKSSSGS 535