BLASTX nr result
ID: Ephedra27_contig00006109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00006109
(399 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006661913.1| PREDICTED: 60S ribosomal protein L27-3-like ... 68 1e-09
ref|XP_006656055.1| PREDICTED: 60S ribosomal protein L27-3-like ... 68 1e-09
ref|XP_004963680.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 68 1e-09
ref|NP_001046570.1| Os02g0284600 [Oryza sativa Japonica Group] g... 68 1e-09
ref|NP_001146947.1| 60S ribosomal protein L27 [Zea mays] gi|1947... 68 1e-09
tpg|DAA35933.1| TPA: 60S ribosomal protein L27 [Zea mays] 68 1e-09
ref|NP_001131879.1| 60S ribosomal protein L27 [Zea mays] gi|1946... 68 1e-09
gb|ABK93484.1| unknown [Populus trichocarpa] 67 2e-09
ref|XP_002300063.1| 60S ribosomal protein L27 [Populus trichocar... 67 2e-09
ref|XP_002437450.1| hypothetical protein SORBIDRAFT_10g027330 [S... 67 3e-09
ref|XP_006481358.1| PREDICTED: 60S ribosomal protein L27-like [C... 66 4e-09
ref|NP_001065410.1| Os10g0564300 [Oryza sativa Japonica Group] g... 66 5e-09
gb|ABR25709.1| 60S ribosomal protein l27 [Oryza sativa Indica Gr... 66 5e-09
ref|XP_004241408.1| PREDICTED: 60S ribosomal protein L27-like [S... 65 7e-09
gb|ACG47567.1| hypothetical protein [Zea mays] 65 7e-09
ref|XP_002323180.1| ribosomal protein L27 [Populus trichocarpa] ... 65 7e-09
gb|EOX93172.1| Ribosomal L27e protein family [Theobroma cacao] 65 9e-09
gb|AFW68968.1| 60S ribosomal protein L27 [Zea mays] 65 1e-08
ref|NP_001150228.1| 60S ribosomal protein L27 [Zea mays] gi|1956... 65 1e-08
gb|EPS69465.1| hypothetical protein M569_05303 [Genlisea aurea] 64 2e-08
>ref|XP_006661913.1| PREDICTED: 60S ribosomal protein L27-3-like [Oryza brachyantha]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 104 TRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137
>ref|XP_006656055.1| PREDICTED: 60S ribosomal protein L27-3-like [Oryza brachyantha]
Length = 134
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 101 TRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 134
>ref|XP_004963680.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L27-3-like
[Setaria italica]
Length = 231
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 198 TRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 231
>ref|NP_001046570.1| Os02g0284600 [Oryza sativa Japonica Group]
gi|47847708|dbj|BAD21487.1| putative 60S ribosomal
protein L27 [Oryza sativa Japonica Group]
gi|47848339|dbj|BAD22201.1| putative 60S ribosomal
protein L27 [Oryza sativa Japonica Group]
gi|113536101|dbj|BAF08484.1| Os02g0284600 [Oryza sativa
Japonica Group] gi|125538995|gb|EAY85390.1| hypothetical
protein OsI_06769 [Oryza sativa Indica Group]
gi|125581675|gb|EAZ22606.1| hypothetical protein
OsJ_06275 [Oryza sativa Japonica Group]
gi|215768337|dbj|BAH00566.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 104 TRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137
>ref|NP_001146947.1| 60S ribosomal protein L27 [Zea mays] gi|194702524|gb|ACF85346.1|
unknown [Zea mays] gi|195605688|gb|ACG24674.1| 60S
ribosomal protein L27 [Zea mays]
gi|195615444|gb|ACG29552.1| 60S ribosomal protein L27
[Zea mays] gi|195620764|gb|ACG32212.1| 60S ribosomal
protein L27 [Zea mays] gi|413943344|gb|AFW75993.1| 60S
ribosomal protein L27 [Zea mays]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 104 TRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137
>tpg|DAA35933.1| TPA: 60S ribosomal protein L27 [Zea mays]
Length = 167
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 134 TRDKKVEACKAAKARLEERFKTGKNRWFFTKLRF 167
>ref|NP_001131879.1| 60S ribosomal protein L27 [Zea mays] gi|194692804|gb|ACF80486.1|
unknown [Zea mays] gi|195606040|gb|ACG24850.1| 60S
ribosomal protein L27 [Zea mays]
gi|195617436|gb|ACG30548.1| 60S ribosomal protein L27
[Zea mays] gi|195624172|gb|ACG33916.1| 60S ribosomal
protein L27 [Zea mays] gi|195628330|gb|ACG35995.1| 60S
ribosomal protein L27 [Zea mays]
gi|195634855|gb|ACG36896.1| 60S ribosomal protein L27
[Zea mays] gi|195644732|gb|ACG41834.1| 60S ribosomal
protein L27 [Zea mays] gi|413919581|gb|AFW59513.1| 60S
ribosomal protein L27 [Zea mays]
Length = 137
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 104 TRDKKVEACKAAKARLEERFKTGKNRWFFTKLRF 137
>gb|ABK93484.1| unknown [Populus trichocarpa]
Length = 135
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
Frame = -1
Query: 399 KTIVGAD---TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
K +V AD T+DKK+TACK KA EERFKTGKNRWFFTKLRF
Sbjct: 92 KDVVTADYLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135
>ref|XP_002300063.1| 60S ribosomal protein L27 [Populus trichocarpa]
gi|118481395|gb|ABK92640.1| unknown [Populus
trichocarpa] gi|118483186|gb|ABK93497.1| unknown
[Populus trichocarpa] gi|118484849|gb|ABK94291.1|
unknown [Populus trichocarpa]
gi|222847321|gb|EEE84868.1| 60S ribosomal protein L27
[Populus trichocarpa]
Length = 135
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
Frame = -1
Query: 399 KTIVGAD---TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
K +V AD T+DKK+TACK KA EERFKTGKNRWFFTKLRF
Sbjct: 92 KDVVTADCLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135
>ref|XP_002437450.1| hypothetical protein SORBIDRAFT_10g027330 [Sorghum bicolor]
gi|241915673|gb|EER88817.1| hypothetical protein
SORBIDRAFT_10g027330 [Sorghum bicolor]
Length = 137
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACK KA LEERFKTGKNRWFFTKLRF
Sbjct: 104 TRDKKVAACKTAKARLEERFKTGKNRWFFTKLRF 137
>ref|XP_006481358.1| PREDICTED: 60S ribosomal protein L27-like [Citrus sinensis]
Length = 135
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
Frame = -1
Query: 399 KTIVGADT---RDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
K +V AD+ +DKKVTACK K LEERFKTGKNRWFFTKLRF
Sbjct: 92 KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 135
>ref|NP_001065410.1| Os10g0564300 [Oryza sativa Japonica Group] gi|582044893|pdb|3J61|Z
Chain Z, Localization Of The Large Subunit Ribosomal
Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum
Translating 80s Ribosome
gi|12597895|gb|AAG60203.1|AC084763_23 putative ribosomal
protein L27 [Oryza sativa Japonica Group]
gi|31433546|gb|AAP55044.1| 60S ribosomal protein L27,
putative, expressed [Oryza sativa Japonica Group]
gi|113639942|dbj|BAF27247.1| Os10g0564300 [Oryza sativa
Japonica Group] gi|125532982|gb|EAY79547.1| hypothetical
protein OsI_34676 [Oryza sativa Indica Group]
gi|125575717|gb|EAZ17001.1| hypothetical protein
OsJ_32486 [Oryza sativa Japonica Group]
gi|149391867|gb|ABR25852.1| 60S ribosomal protein l27
[Oryza sativa Indica Group] gi|215694733|dbj|BAG89924.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 136
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACK+ KA LE+RFKTGKNRWFFTKLRF
Sbjct: 103 TRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 136
>gb|ABR25709.1| 60S ribosomal protein l27 [Oryza sativa Indica Group]
Length = 82
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACK+ KA LE+RFKTGKNRWFFTKLRF
Sbjct: 49 TRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 82
>ref|XP_004241408.1| PREDICTED: 60S ribosomal protein L27-like [Solanum lycopersicum]
gi|565361085|ref|XP_006347291.1| PREDICTED: 60S
ribosomal protein L27-like [Solanum tuberosum]
Length = 135
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/44 (75%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
Frame = -1
Query: 399 KTIVGADT---RDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
K +V AD RDKKVTA K KA LEERFKTGKNRWFFTKLRF
Sbjct: 92 KDVVNADVLQARDKKVTAAKETKARLEERFKTGKNRWFFTKLRF 135
>gb|ACG47567.1| hypothetical protein [Zea mays]
Length = 57
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKV ACKA KA LEERFKTGKNRWFFT LRF
Sbjct: 24 TRDKKVEACKAAKARLEERFKTGKNRWFFTXLRF 57
>ref|XP_002323180.1| ribosomal protein L27 [Populus trichocarpa]
gi|118483861|gb|ABK93821.1| unknown [Populus
trichocarpa] gi|222867810|gb|EEF04941.1| ribosomal
protein L27 [Populus trichocarpa]
Length = 135
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/44 (75%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
Frame = -1
Query: 399 KTIVGAD---TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
K V AD T+DKKVTACK KA EERFKTGKNRWFFTKLRF
Sbjct: 92 KDAVTADSLTTKDKKVTACKDTKARFEERFKTGKNRWFFTKLRF 135
>gb|EOX93172.1| Ribosomal L27e protein family [Theobroma cacao]
Length = 135
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -1
Query: 396 TIVGADTRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
T+ T+DKKV ACKA K EERFKTGKNRWFFTKLRF
Sbjct: 96 TVDALQTKDKKVAACKATKERFEERFKTGKNRWFFTKLRF 135
>gb|AFW68968.1| 60S ribosomal protein L27 [Zea mays]
Length = 260
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/34 (85%), Positives = 29/34 (85%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
T DKKV ACK KA LEERFKTGKNRWFFTKLRF
Sbjct: 227 THDKKVAACKTAKARLEERFKTGKNRWFFTKLRF 260
>ref|NP_001150228.1| 60S ribosomal protein L27 [Zea mays] gi|195637670|gb|ACG38303.1|
60S ribosomal protein L27 [Zea mays]
gi|195638588|gb|ACG38762.1| 60S ribosomal protein L27
[Zea mays] gi|238007688|gb|ACR34879.1| unknown [Zea
mays]
Length = 137
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/34 (85%), Positives = 29/34 (85%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
T DKKV ACK KA LEERFKTGKNRWFFTKLRF
Sbjct: 104 THDKKVAACKTAKARLEERFKTGKNRWFFTKLRF 137
>gb|EPS69465.1| hypothetical protein M569_05303 [Genlisea aurea]
Length = 135
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 378 TRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 277
TRDKKVTACK +K EERFKTGKNRWFF+KLRF
Sbjct: 102 TRDKKVTACKEIKKRFEERFKTGKNRWFFSKLRF 135