BLASTX nr result

ID: Ephedra27_contig00005710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00005710
         (463 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849811.1| hypothetical protein AMTR_s00176p00064210 [A...    62   1e-07
ref|XP_006386378.1| hypothetical protein POPTR_0002s08690g [Popu...    58   1e-06
ref|XP_002302251.2| hypothetical protein POPTR_0002s08690g [Popu...    58   1e-06
ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...    57   3e-06
ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cuc...    57   3e-06
ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...    56   6e-06
gb|AAQ20089.1| S1 self-incompatibility locus-linked pollen G211 ...    56   6e-06

>ref|XP_006849811.1| hypothetical protein AMTR_s00176p00064210 [Amborella trichopoda]
            gi|548853388|gb|ERN11392.1| hypothetical protein
            AMTR_s00176p00064210 [Amborella trichopoda]
          Length = 1165

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
 Frame = -2

Query: 441  RRLDDAVLLVNPARPLRVATKSEDCSESLQNLEVE----TREDFLGNMLDGDLEHDNIHP 274
            R LDD  L +          K+ D SE     EV     T E   G+ L  +  +  +  
Sbjct: 1070 RNLDDFALTI----------KTSDLSEPTSEQEVRDENITHEATPGSCLVVNPYNKQVRQ 1119

Query: 273  -YSIEPAVFPLILGPLSTVPVSLYAVGGEREPPDVSVRLFASSYL 142
              +++PAVFPL L  LSTVPVS+ AVGGER   D++VRL+ASSYL
Sbjct: 1120 NQAVDPAVFPLTLQYLSTVPVSVNAVGGERSRMDIAVRLYASSYL 1164


>ref|XP_006386378.1| hypothetical protein POPTR_0002s08690g [Populus trichocarpa]
            gi|550344578|gb|ERP64175.1| hypothetical protein
            POPTR_0002s08690g [Populus trichocarpa]
          Length = 1099

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -2

Query: 288  DNIHPYSIEPAVFPLILGPLSTVPVSLYAVGGEREPPDVSVRLFASSY 145
            D I    I+P+VFPL +  LST+PV+L+A+GG+  PPD+ VRLF SSY
Sbjct: 1050 DAILKSEIDPSVFPLTVRLLSTIPVALHAIGGDDGPPDIGVRLFMSSY 1097


>ref|XP_002302251.2| hypothetical protein POPTR_0002s08690g [Populus trichocarpa]
            gi|550344577|gb|EEE81524.2| hypothetical protein
            POPTR_0002s08690g [Populus trichocarpa]
          Length = 1083

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -2

Query: 288  DNIHPYSIEPAVFPLILGPLSTVPVSLYAVGGEREPPDVSVRLFASSY 145
            D I    I+P+VFPL +  LST+PV+L+A+GG+  PPD+ VRLF SSY
Sbjct: 1034 DAILKSEIDPSVFPLTVRLLSTIPVALHAIGGDDGPPDIGVRLFMSSY 1081


>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like [Cucumis
            sativus]
          Length = 1159

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = -2

Query: 267  IEPAVFPLILGPLSTVPVSLYAVGGEREPPDVSVRLFASSYLR 139
            ++PA+FPL +  LST+PV+L+AVGG+  P D+ VRL+ SSYLR
Sbjct: 1117 VDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1159


>ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus]
          Length = 1125

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = -2

Query: 267  IEPAVFPLILGPLSTVPVSLYAVGGEREPPDVSVRLFASSYLR 139
            ++PA+FPL +  LST+PV+L+AVGG+  P D+ VRL+ SSYLR
Sbjct: 1083 VDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1125


>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
            gi|223546865|gb|EEF48362.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1099

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = -2

Query: 288  DNIHPYSIEPAVFPLILGPLSTVPVSLYAVGGEREPPDVSVRLFASSYL 142
            D I    I+P VFP+ +  LST+PV+L+AVGG+  P ++ VR+FASSYL
Sbjct: 1050 DPISESKIDPVVFPITVRLLSTIPVALHAVGGDDRPIEIGVRVFASSYL 1098


>gb|AAQ20089.1| S1 self-incompatibility locus-linked pollen G211 protein [Petunia
           integrifolia subsp. inflata]
          Length = 259

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
 Frame = -2

Query: 462 KRFGYR-----FRRLDDAVLLVNPARPLRVATKSEDCSESLQNLEVETREDFLGNML-DG 301
           KRF  R      R LD+   +VNP            C  + + +  E R+      L +G
Sbjct: 157 KRFNRRGSPGKCRALDEVAFIVNP------------CKLNQEPVVCEQRDTRNNRSLPNG 204

Query: 300 DLEHD-NIHPYSIEPAVFPLILGPLSTVPVSLYAVGGEREPPDVSVRLFASSY 145
           D+    N     +EPAVFP+ L  LST+PV+L+A GG   P ++ VRLF SSY
Sbjct: 205 DISRSCNSDVKKVEPAVFPMTLRLLSTIPVALHADGGGDGPLEIGVRLFVSSY 257


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